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FFCP PHASE1:Mm9::chr18:70301222..70301276,-: Difference between revisions

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{{FFCP|EntrezGene=80718|HGNC=|MCL_coexpression_id=2245|UniProt=Q99P58,Q549X4|association_with_transcript=0bp_to_ENSMUST00000121693,ENSMUST00000127217,NM_001082553,uc008foa.1_5end|description=CAGE_peak_2_at_Rab27b_5end|id=chr18:70301222..70301276,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.86e-12!63;UBERON:0001049!7.92e-11!52;UBERON:0005068!7.92e-11!52;UBERON:0006241!7.92e-11!52;UBERON:0007135!7.92e-11!52;UBERON:0000955!3.62e-10!50;UBERON:0006238!3.62e-10!50;UBERON:0000475!4.19e-10!200;UBERON:0002616!8.79e-10!49;UBERON:0002346!5.17e-09!71;UBERON:0003075!5.17e-09!71;UBERON:0007284!5.17e-09!71;UBERON:0003056!1.24e-08!49;UBERON:0000468!3.91e-08!333;UBERON:0003080!1.56e-07!40;UBERON:0002021!1.75e-07!10;UBERON:0000411!1.75e-07!10;UBERON:0001950!1.75e-07!10;UBERON:0001017!2.59e-07!73;UBERON:0005743!2.59e-07!73;UBERON:0002780!5.29e-07!39;UBERON:0001890!5.29e-07!39;UBERON:0006240!5.29e-07!39;UBERON:0002020!8.17e-07!34;UBERON:0004121!8.79e-07!102;UBERON:0000924!8.79e-07!102;UBERON:0006601!8.79e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-12,54;UBERON:0002346,1.32e-11,64;UBERON:0003075,1.32e-11,64;UBERON:0007284,1.32e-11,64;UBERON:0001049,1.52e-11,52;UBERON:0005068,1.52e-11,52;UBERON:0006241,1.52e-11,52;UBERON:0007135,1.52e-11,52;UBERON:0010371,3.96e-11,73;UBERON:0000955,2.85e-09,47;UBERON:0006238,2.85e-09,47;UBERON:0004121,4.12e-09,95;UBERON:0000924,4.12e-09,95;UBERON:0006601,4.12e-09,95;UBERON:0002616,7.21e-09,46;UBERON:0003056,7.69e-09,49;UBERON:0001017,2.17e-08,73;UBERON:0002021,4.00e-08,10;UBERON:0000411,4.00e-08,10;UBERON:0001950,4.00e-08,10;UBERON:0003080,9.83e-08,40;UBERON:0001016,1.15e-07,75;UBERON:0002780,3.65e-07,39;UBERON:0001890,3.65e-07,39;UBERON:0006240,3.65e-07,39;UBERON:0002020,5.63e-07,34;UBERON:0005178,8.05e-07,17;UBERON:0005181,8.05e-07,17;UBERON:0002224,8.05e-07,17;UBERON:0000915,8.05e-07,17;UBERON:0008947,8.05e-07,17;UBERON:0003258,8.05e-07,17|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,1.73310971850765,1.66234645358492,2.04169356262369,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,1.54701627683233,1.82084814773638,3.1739458756322,0,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0.210324961351382,7.7125765789027,8.83474163806454,0.979926393719632,0.0958454710182364,0,22.0231761998777,26.9420283359746,31.1821262510174,0.923204014111357,2.01272815925301,1.04182674111352,12.8424179540635,29.2636557216474,23.0725354142983,23.8649154233671,25.7692742246376,5.21918448310842,0,0.377857800533928,12.4641730141721,0,0,0,0.649776417447669,0,3.65155492342555,0.170430322578058,0,0,3.66192891419369,0,0,0,5.41227602528035,4.30711771307668,2.52762222507392,2.05530983494308,0,2.67195850316685,0.173485326766136,0,0.230615497256059,0.753613202763113,0.823120949949934,1.0053327306374,1.48316980640624,0.433798070759735,3.5384422077995,2.42650274921114,3.09178125844551,3.39412677194655,7.45567044872489,5.5628351432194,5.86450779077674,2.55457055208591,0.239630249011841,0.599902730993408,0,54.9731646615699,37.972550033946,6.28271760564322,44.4990259692228,35.2887331115856,37.1940599761613,32.9349764027548,0.611036183101898,3.85661608891288,2.27450482590307,16.414464759145,0.390361328888111,1.14951052216736,1.0803727788321,3.46621081022145,3.19771546011241,6.40568601424249,5.80950692270319,25.0942269616845,0.215567992932842,1.89106080167819,2.11141348996739,0.876782929710299,3.05851974148158,3.1342694986995,2.67516777330327,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0,0.462801338662135,0.930135779001631,0.268273401399619,0.350296027101508,0.658239399653922,0.32833492815819,0.486412857275134,0.438599962275997,0.878200461164203,0.268412837520744,43.7403093013385,3.80747065803352,1.32167513193519,0,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,0.889512175379481,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,1.59165177632921,1.36474860983384,4.49409704327111,1.08069024937347,1.39398891278057,0.189667900953082,0.913988100877831,2.25415471346161,1.22190796707189,0.969762435838129,1.40271639780637,3.16182685621286,2.50937251565324,2.98297582898612,1.23397163921801,0.296452627087149,0.500535317148282,0.786235980452812,0.674586337154561,0.608580364165509,0.72353147925725,1.01850340712568,0.863088412352432,0.324270453550071,1.37280706594041,1.43768206527355,1.48856379067401,0.936113019343682,2.02063102357689,0.179397413521912,0.964887042726734,11.4546977903295,1.32643988239339,3.25929952884052,1.69745085775188,4.45911471748154,17.9231695462743,39.2772007461923,14.8301572371927,19.8620281573801,15.9454576547118,14.9887482538038,13.109065177259,22.7944176062982,21.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:80718
|HGNC=
|MCL_coexpression_id=2245
|TSSclassifier=NA
|UniProt=uniprot:Q99P58,uniprot:Q549X4
|association_with_transcript=0bp_to_ENSMUST00000121693,ENSMUST00000127217,NM_001082553,uc008foa.1_5end
|cluster_id=chr18:70301222..70301276,-
|description=CAGE_peak_2_at_Rab27b_5end
|id=chr18:70301222..70301276,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.86e-12!63;UBERON:0001049!7.92e-11!52;UBERON:0005068!7.92e-11!52;UBERON:0006241!7.92e-11!52;UBERON:0007135!7.92e-11!52;UBERON:0000955!3.62e-10!50;UBERON:0006238!3.62e-10!50;UBERON:0000475!4.19e-10!200;UBERON:0002616!8.79e-10!49;UBERON:0002346!5.17e-09!71;UBERON:0003075!5.17e-09!71;UBERON:0007284!5.17e-09!71;UBERON:0003056!1.24e-08!49;UBERON:0000468!3.91e-08!333;UBERON:0003080!1.56e-07!40;UBERON:0002021!1.75e-07!10;UBERON:0000411!1.75e-07!10;UBERON:0001950!1.75e-07!10;UBERON:0001017!2.59e-07!73;UBERON:0005743!2.59e-07!73;UBERON:0002780!5.29e-07!39;UBERON:0001890!5.29e-07!39;UBERON:0006240!5.29e-07!39;UBERON:0002020!8.17e-07!34;UBERON:0004121!8.79e-07!102;UBERON:0000924!8.79e-07!102;UBERON:0006601!8.79e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-12,54;UBERON:0002346,1.32e-11,64;UBERON:0003075,1.32e-11,64;UBERON:0007284,1.32e-11,64;UBERON:0001049,1.52e-11,52;UBERON:0005068,1.52e-11,52;UBERON:0006241,1.52e-11,52;UBERON:0007135,1.52e-11,52;UBERON:0010371,3.96e-11,73;UBERON:0000955,2.85e-09,47;UBERON:0006238,2.85e-09,47;UBERON:0004121,4.12e-09,95;UBERON:0000924,4.12e-09,95;UBERON:0006601,4.12e-09,95;UBERON:0002616,7.21e-09,46;UBERON:0003056,7.69e-09,49;UBERON:0001017,2.17e-08,73;UBERON:0002021,4.00e-08,10;UBERON:0000411,4.00e-08,10;UBERON:0001950,4.00e-08,10;UBERON:0003080,9.83e-08,40;UBERON:0001016,1.15e-07,75;UBERON:0002780,3.65e-07,39;UBERON:0001890,3.65e-07,39;UBERON:0006240,3.65e-07,39;UBERON:0002020,5.63e-07,34;UBERON:0005178,8.05e-07,17;UBERON:0005181,8.05e-07,17;UBERON:0002224,8.05e-07,17;UBERON:0000915,8.05e-07,17;UBERON:0008947,8.05e-07,17;UBERON:0003258,8.05e-07,17
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,1.73310971850765,1.66234645358492,2.04169356262369,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,1.54701627683233,1.82084814773638,3.1739458756322,0,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0.210324961351382,7.7125765789027,8.83474163806454,0.979926393719632,0.0958454710182364,0,22.0231761998777,26.9420283359746,31.1821262510174,0.923204014111357,2.01272815925301,1.04182674111352,12.8424179540635,29.2636557216474,23.0725354142983,23.8649154233671,25.7692742246376,5.21918448310842,0,0.377857800533928,12.4641730141721,0,0,0,0.649776417447669,0,3.65155492342555,0.170430322578058,0,0,3.66192891419369,0,0,0,5.41227602528035,4.30711771307668,2.52762222507392,2.05530983494308,0,2.67195850316685,0.173485326766136,0,0.230615497256059,0.753613202763113,0.823120949949934,1.0053327306374,1.48316980640624,0.433798070759735,3.5384422077995,2.42650274921114,3.09178125844551,3.39412677194655,7.45567044872489,5.5628351432194,5.86450779077674,2.55457055208591,0.239630249011841,0.599902730993408,0,54.9731646615699,37.972550033946,6.28271760564322,44.4990259692228,35.2887331115856,37.1940599761613,32.9349764027548,0.611036183101898,3.85661608891288,2.27450482590307,16.414464759145,0.390361328888111,1.14951052216736,1.0803727788321,3.46621081022145,3.19771546011241,6.40568601424249,5.80950692270319,25.0942269616845,0.215567992932842,1.89106080167819,2.11141348996739,0.876782929710299,3.05851974148158,3.1342694986995,2.67516777330327,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0,0.462801338662135,0.930135779001631,0.268273401399619,0.350296027101508,0.658239399653922,0.32833492815819,0.486412857275134,0.438599962275997,0.878200461164203,0.268412837520744,43.7403093013385,3.80747065803352,1.32167513193519,0,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,0.889512175379481,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,1.59165177632921,1.36474860983384,4.49409704327111,1.08069024937347,1.39398891278057,0.189667900953082,0.913988100877831,2.25415471346161,1.22190796707189,0.969762435838129,1.40271639780637,3.16182685621286,2.50937251565324,2.98297582898612,1.23397163921801,0.296452627087149,0.500535317148282,0.786235980452812,0.674586337154561,0.608580364165509,0.72353147925725,1.01850340712568,0.863088412352432,0.324270453550071,1.37280706594041,1.43768206527355,1.48856379067401,0.936113019343682,2.02063102357689,0.179397413521912,0.964887042726734,11.4546977903295,1.32643988239339,3.25929952884052,1.69745085775188,4.45911471748154,17.9231695462743,39.2772007461923,14.8301572371927,19.8620281573801,15.9454576547118,14.9887482538038,13.109065177259,22.7944176062982,21.6973587872267,0,0,0,0.275936746304732,39.334894547009,34.5774475446999,0,3.02965112645248,0.315508219416257,0,1.50796378412959,0,0,0,0.404810701674894,0.584511715822624,0.395287777946524,10.9249247583414,1.13552068166615,0.534196811001766,2.93196526836437,1.48473110675282,33.1862845849907,0.971122544619926,0.302323556964751,5.84675747243284,2.36241514304618,8.9156192903739,5.42699415653264,6.90714086007261,11.4079161083111,16.4339114126624,21.0837217149998,23.721174947083,22.46901397975,1.98067203434441,0.258717367565509,3.00071849044229,5.32020700926821,6.42127743367454,9.54384319492302,1.8267896946876,0.23467170806371,1.27099242518292,25.5812941743756,1.15420377059036,2.58343082713449,2.17126529741361,1.55184047204077,2.9545361954111,0.874442509889552,34.1182555699338,0.683483523191411,0.619160603889667,1.48155621895769,1.13021074202815,0.683471138605126,0.457556346413045,0.169978429993855,0.279902904647316,0,14.3200592702267,0.790839983952838,1.62655573701479,4.32021363287205,5.01811910434725,6.55087691238533,8.22672512947406,8.92657321833628,7.0674104335688,0.90730481304255,18.0188400795208,0,0.448549638131936,0.330916980914195,0.777804753376191,0.258319646955462,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0.948033361884535,1.62180172232131,1.02710957164827,1.81889152168913,1.79026695667481,0.79472541912506,0.600977247599844,1.47689527174577,0.403865799792591,0.533447646584999,0.302478555410522,0.682205165178267,0.769694733122636,0.818138315270983,1.81384306892169,0,0,0,44.8199858154682,1.12609485270709,0.73260649706906,2.14368379079066,5.01572104035363,30.4965995013216,46.4928488872249,29.7905666988486,25.9498305338968,31.5137959094495,31.7265436903674,31.0510350106631,36.0256962579376,36.2513927187364,31.0656187051092,0.726511433089237,0.798049746802062,2.21953687480374,2.43106717068294,2.09613162627982,2.75765262675021,5.11167473943715,2.26638562962784,6.09746498224449,5.81203587056734,6.84394109703647,3.58390048633545,5.24392441831341,4.09760975391163,5.16919220600519,4.28664322154766,3.94006708212509,4.05109362973781,4.94503080963968,5.15196220470391,5.48590803816665,5.32427418478012,4.5302876089991,5.23247099876383,4.42314087952054,4.65380343404221,3.84148743032822,4.99832451731901,4.88894809845102,3.92799590160417,4.38949567059444,4.23569274214923,1.63692417267876,4.33823155320705,2.89359916471712,2.99772693525535,5.84829021113521,4.94203424311086,2.48674831689496,2.42650561031467,4.40548887678801
|short_description=p2@Rab27b
}}

Revision as of 02:27, 6 August 2015

Short description:p2@Rab27b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab27b_5end
Coexpression cluster:MCL_coexpression_mm9:2245
Association with transcript: 0bp_to_ENSMUST00000121693, ENSMUST00000127217, NM_001082553, uc008foa.1_5end
EntrezGene:80718
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab27b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A454.97
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D544.50
cortex, neonate N30.CNhs11107.1392-42F235.29
diencephalon, adult.CNhs10482.20-12F237.19
diencephalon, neonate N30.CNhs11201.1388-42B232.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G416.41
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E843.74
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A617.92
lung, embryo E18.CNhs10583.1287-20I639.28
lung, neonate N00.CNhs11224.640-42C614.83
lung, neonate N06.CNhs11212.683-20E519.86
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E614.99
lung, neonate N20.CNhs11109.822-18A413.11
lung, neonate N25.CNhs11119.1359-25C722.79
lung, neonate N30.CNhs11133.1394-42H221.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C239.33
medulla oblongata, neonate N30.CNhs11200.1396-42A334.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E433.19
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B616.43
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G822.47
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F825.58
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C934.12
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A98.93
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E444.82
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A130.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.07
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.38e-1254
neurectoderm1.32e-1164
neural plate1.32e-1164
presumptive neural plate1.32e-1164
neural tube1.52e-1152
neural rod1.52e-1152
future spinal cord1.52e-1152
neural keel1.52e-1152
ecto-epithelium3.96e-1173
brain2.85e-0947
future brain2.85e-0947
ectoderm-derived structure4.12e-0995
ectoderm4.12e-0995
presumptive ectoderm4.12e-0995
regional part of brain7.21e-0946
pre-chordal neural plate7.69e-0949
central nervous system2.17e-0873
occipital lobe4.00e-0810
visual cortex4.00e-0810
neocortex4.00e-0810
anterior neural tube9.83e-0840
nervous system1.15e-0775
regional part of forebrain3.65e-0739
forebrain3.65e-0739
future forebrain3.65e-0739
gray matter5.63e-0734
thoracic cavity element8.05e-0717
thoracic segment organ8.05e-0717
thoracic cavity8.05e-0717
thoracic segment of trunk8.05e-0717
respiratory primordium8.05e-0717
endoderm of foregut8.05e-0717
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