FFCP PHASE1:Mm9::chr1:88997154..88997167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:88997154..88997167,- | |||
|description=CAGE_peak_at_chr1:88997154..88997167,- | |description=CAGE_peak_at_chr1:88997154..88997167,- | ||
|id=chr1:88997154..88997167,- | |id=chr1:88997154..88997167,- | ||
|ontology_enrichment_celltype=CL:0000239!5.92e-11!6;CL:0000677!5.92e-11!6;CL:0000212!5.92e-11!6;CL:0000584!5.92e-11!6;CL:0000075!2.49e-09!7;CL:0002563!3.65e-07!9;CL:0002251!3.65e-07!9 | |ontology_enrichment_celltype=CL:0000239!5.92e-11!6;CL:0000677!5.92e-11!6;CL:0000212!5.92e-11!6;CL:0000584!5.92e-11!6;CL:0000075!2.49e-09!7;CL:0002563!3.65e-07!9;CL:0002251!3.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.51e-09,6;CL:0000677,3.51e-09,6;CL:0000584,3.51e-09,6;CL:0000075,6.14e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.37e-24!43;UBERON:0005409!3.54e-18!59;UBERON:0000344!4.73e-16!15;UBERON:0001242!7.23e-12!13;UBERON:0000060!7.23e-12!13;UBERON:0001262!7.23e-12!13;UBERON:0004786!7.23e-12!13;UBERON:0004923!3.01e-09!24;UBERON:0003350!3.65e-07!9;UBERON:0004808!3.65e-07!9;UBERON:0001277!3.65e-07!9;UBERON:0001007!3.76e-07!128;UBERON:0001555!3.76e-07!128;UBERON:0007026!3.76e-07!128;UBERON:0004119!5.91e-07!130;UBERON:0000925!5.91e-07!130;UBERON:0006595!5.91e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.87e-33,31;UBERON:0005409,2.18e-21,47;UBERON:0000344,4.76e-18,15;UBERON:0001962,2.97e-12,2;UBERON:0001961,2.97e-12,2;UBERON:0001744,2.97e-12,2;UBERON:0004923,4.78e-11,24;UBERON:0001242,5.61e-11,13;UBERON:0001262,5.61e-11,13;UBERON:0004786,5.61e-11,13;UBERON:0001007,1.98e-10,116;UBERON:0001555,1.98e-10,116;UBERON:0007026,1.98e-10,116;UBERON:0004119,3.22e-10,118;UBERON:0000925,3.22e-10,118;UBERON:0006595,3.22e-10,118;UBERON:0002465,1.84e-08,3;UBERON:0004921,9.74e-08,114;UBERON:0003199,6.93e-07,1 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,3.62957053568196,3.00537437967808,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,0.57423196411502,0,0.430942465371778,2.09025761402011,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.05780226665418,0,0,0,0.403367049246685,0.22237804384487,0.570676878337677,1.89811624617805,1.64698954724011,1.25667604400135,1.59165177632921,0.974820435595601,2.69645822596266,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,0.909998478779072,3.62957053568196,3.00537437967808,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,0.57423196411502,0,0.430942465371778,2.09025761402011,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.05780226665418,0,0,0,0.403367049246685,0.22237804384487,0.570676878337677,1.89811624617805,1.64698954724011,1.25667604400135,1.59165177632921,0.974820435595601,2.69645822596266,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:88997154..88997167,- | |short_description=p@chr1:88997154..88997167,- | ||
}} | }} |
Latest revision as of 03:32, 6 August 2015
Short description: | p@chr1:88997154..88997167, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88997154..88997167, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.51e-09 | 6 |
gut absorptive cell | 3.51e-09 | 6 |
enterocyte | 3.51e-09 | 6 |
columnar/cuboidal epithelial cell | 6.14e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.87e-33 | 31 |
gastrointestinal system | 2.18e-21 | 47 |
mucosa | 4.76e-18 | 15 |
gut-associated lymphoid tissue | 2.97e-12 | 2 |
mucosa-associated lymphoid tissue | 2.97e-12 | 2 |
lymphoid tissue | 2.97e-12 | 2 |
organ component layer | 4.78e-11 | 24 |
intestinal mucosa | 5.61e-11 | 13 |
wall of intestine | 5.61e-11 | 13 |
gastrointestinal system mucosa | 5.61e-11 | 13 |
digestive system | 1.98e-10 | 116 |
digestive tract | 1.98e-10 | 116 |
primitive gut | 1.98e-10 | 116 |
endoderm-derived structure | 3.22e-10 | 118 |
endoderm | 3.22e-10 | 118 |
presumptive endoderm | 3.22e-10 | 118 |
lymphoid system | 1.84e-08 | 3 |
subdivision of digestive tract | 9.74e-08 | 114 |
egg chamber | 6.93e-07 | 1 |