FFCP PHASE1:Mm9::chr18:77803850..77803901,-: Difference between revisions
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{{FFCP|EntrezGene=225743|HGNC=|MCL_coexpression_id=2|UniProt=E9QAU8|association_with_transcript=0bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end|description=CAGE_peak_3_at_Rnf165_5end|id=chr18:77803850..77803901,-|ontology_enrichment_celltype=CL:0000540!5.28e-17!33;CL:0000047!5.28e-17!33;CL:0000031!5.28e-17!33;CL:0000404!5.28e-17!33;CL:0000117!1.87e-13!23;CL:0000337!1.87e-13!23;CL:0002319!2.16e-12!43;CL:0000221!2.66e-12!44;CL:0000133!2.66e-12!44;CL:0000393!1.64e-11!39;CL:0000211!1.64e-11!39;CL:0000055!3.85e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-22,33;CL:0000047,1.30e-22,33;CL:0000031,1.30e-22,33;CL:0000404,1.30e-22,33;CL:0000117,1.56e-18,23;CL:0000337,1.56e-18,23;CL:0000393,2.78e-17,39;CL:0000211,2.78e-17,39;CL:0002319,1.68e-15,43;CL:0000221,6.97e-15,44;CL:0000133,6.97e-15,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.70e-32!102;UBERON:0000924!3.70e-32!102;UBERON:0006601!3.70e-32!102;UBERON:0002346!3.76e-30!71;UBERON:0003075!3.76e-30!71;UBERON:0007284!3.76e-30!71;UBERON:0001017!7.47e-30!73;UBERON:0005743!7.47e-30!73;UBERON:0000073!1.95e-28!75;UBERON:0001016!1.95e-28!75;UBERON:0000033!1.30e-27!63;UBERON:0003056!1.85e-24!49;UBERON:0001049!1.36e-23!52;UBERON:0005068!1.36e-23!52;UBERON:0006241!1.36e-23!52;UBERON:0007135!1.36e-23!52;UBERON:0000955!2.64e-23!50;UBERON:0006238!2.64e-23!50;UBERON:0002616!1.36e-22!49;UBERON:0002020!8.87e-21!34;UBERON:0003080!2.90e-20!40;UBERON:0002780!1.09e-19!39;UBERON:0001890!1.09e-19!39;UBERON:0006240!1.09e-19!39;UBERON:0002791!1.59e-18!29;UBERON:0003528!1.59e-18!29;UBERON:0001893!1.59e-18!29;UBERON:0000956!2.97e-14!21;UBERON:0001869!2.97e-14!21;UBERON:0000203!2.97e-14!21;UBERON:0000153!9.45e-14!94;UBERON:0007811!1.08e-13!86;UBERON:0002619!1.45e-11!17;UBERON:0002021!1.55e-08!10;UBERON:0000411!1.55e-08!10;UBERON:0001950!1.55e-08!10;UBERON:0000468!1.97e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-35,73;UBERON:0004121,1.51e-35,95;UBERON:0000924,1.51e-35,95;UBERON:0006601,1.51e-35,95;UBERON:0002346,1.22e-34,64;UBERON:0003075,1.22e-34,64;UBERON:0007284,1.22e-34,64;UBERON:0001016,4.95e-34,75;UBERON:0010371,5.74e-29,73;UBERON:0000073,3.29e-28,54;UBERON:0003056,1.34e-27,49;UBERON:0002020,1.71e-26,34;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0003528,2.99e-23,29;UBERON:0002791,2.99e-23,29;UBERON:0001893,2.99e-23,29;UBERON:0000955,3.24e-23,47;UBERON:0006238,3.24e-23,47;UBERON:0002616,2.75e-22,46;UBERON:0003080,9.33e-22,40;UBERON:0002780,5.67e-21,39;UBERON:0001890,5.67e-21,39;UBERON:0006240,5.67e-21,39;UBERON:0010314,1.60e-19,92;UBERON:0000956,3.77e-17,21;UBERON:0001869,3.77e-17,21;UBERON:0000203,3.77e-17,21;UBERON:0002619,2.24e-13,17;UBERON:0002021,1.63e-11,10;UBERON:0000411,1.63e-11,10;UBERON:0001950,1.63e-11,10;UBERON:0002420,3.24e-07,8;UBERON:0007245,3.24e-07,8;UBERON:0010009,3.24e-07,8;UBERON:0010011,3.24e-07,8;UBERON:0000454,3.24e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,0,0,0,5.86717736492834,6.87688273053643,5.07065122804943,0,0,0,0,0,0,1.15265491596466,9.95420278161385,9.04539786822327,7.99234853135252,1.71390590642282,3.75476519617743,8.45186514583183,8.53024692062304,4.5960939330501,4.40463523997555,7.2781782708557,6.60508093001847,8.30883612700221,6.67859798297591,7.29278718779464,3.35019598801657,1.68828783009504,3.97275444219706,2.65165726926301,2.84743361598206,4.47358669980721,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,1.63286352971307,1.04091196059682,0.608930956624282,0.461230994512117,0.904335843315735,0.470354828542819,0.628332956648377,0,0.578397427679647,0,0.647067399789637,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,4.94309110035915,6.8625090422794,5.78010019719176,19.9897968221118,15.0872119824895,6.85700547046548,10.5456820994042,0.407357455401265,0,0,1.26265113531884,1.56144531555244,1.37941262660084,2.70093194708024,4.67184935290717,5.57899293040888,7.68682321709099,5.80950692270319,3.88055056108524,0,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.771335564436891,0,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,24.6039239820029,9.77593817603202,0,0,0.213288250535234,1.39342003116263,1.15980715189884,0.403367049246685,0,0.760902504450237,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.775809948670503,0.280543279561274,1.01178459398812,0.147610147979602,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0.287696137450811,0.16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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225743 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QAU8 | |||
|association_with_transcript=0bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end | |||
|cluster_id=chr18:77803850..77803901,- | |||
|description=CAGE_peak_3_at_Rnf165_5end | |||
|id=chr18:77803850..77803901,- | |||
|ontology_enrichment_celltype=CL:0000540!5.28e-17!33;CL:0000047!5.28e-17!33;CL:0000031!5.28e-17!33;CL:0000404!5.28e-17!33;CL:0000117!1.87e-13!23;CL:0000337!1.87e-13!23;CL:0002319!2.16e-12!43;CL:0000221!2.66e-12!44;CL:0000133!2.66e-12!44;CL:0000393!1.64e-11!39;CL:0000211!1.64e-11!39;CL:0000055!3.85e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-22,33;CL:0000047,1.30e-22,33;CL:0000031,1.30e-22,33;CL:0000404,1.30e-22,33;CL:0000117,1.56e-18,23;CL:0000337,1.56e-18,23;CL:0000393,2.78e-17,39;CL:0000211,2.78e-17,39;CL:0002319,1.68e-15,43;CL:0000221,6.97e-15,44;CL:0000133,6.97e-15,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.70e-32!102;UBERON:0000924!3.70e-32!102;UBERON:0006601!3.70e-32!102;UBERON:0002346!3.76e-30!71;UBERON:0003075!3.76e-30!71;UBERON:0007284!3.76e-30!71;UBERON:0001017!7.47e-30!73;UBERON:0005743!7.47e-30!73;UBERON:0000073!1.95e-28!75;UBERON:0001016!1.95e-28!75;UBERON:0000033!1.30e-27!63;UBERON:0003056!1.85e-24!49;UBERON:0001049!1.36e-23!52;UBERON:0005068!1.36e-23!52;UBERON:0006241!1.36e-23!52;UBERON:0007135!1.36e-23!52;UBERON:0000955!2.64e-23!50;UBERON:0006238!2.64e-23!50;UBERON:0002616!1.36e-22!49;UBERON:0002020!8.87e-21!34;UBERON:0003080!2.90e-20!40;UBERON:0002780!1.09e-19!39;UBERON:0001890!1.09e-19!39;UBERON:0006240!1.09e-19!39;UBERON:0002791!1.59e-18!29;UBERON:0003528!1.59e-18!29;UBERON:0001893!1.59e-18!29;UBERON:0000956!2.97e-14!21;UBERON:0001869!2.97e-14!21;UBERON:0000203!2.97e-14!21;UBERON:0000153!9.45e-14!94;UBERON:0007811!1.08e-13!86;UBERON:0002619!1.45e-11!17;UBERON:0002021!1.55e-08!10;UBERON:0000411!1.55e-08!10;UBERON:0001950!1.55e-08!10;UBERON:0000468!1.97e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-35,73;UBERON:0004121,1.51e-35,95;UBERON:0000924,1.51e-35,95;UBERON:0006601,1.51e-35,95;UBERON:0002346,1.22e-34,64;UBERON:0003075,1.22e-34,64;UBERON:0007284,1.22e-34,64;UBERON:0001016,4.95e-34,75;UBERON:0010371,5.74e-29,73;UBERON:0000073,3.29e-28,54;UBERON:0003056,1.34e-27,49;UBERON:0002020,1.71e-26,34;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0003528,2.99e-23,29;UBERON:0002791,2.99e-23,29;UBERON:0001893,2.99e-23,29;UBERON:0000955,3.24e-23,47;UBERON:0006238,3.24e-23,47;UBERON:0002616,2.75e-22,46;UBERON:0003080,9.33e-22,40;UBERON:0002780,5.67e-21,39;UBERON:0001890,5.67e-21,39;UBERON:0006240,5.67e-21,39;UBERON:0010314,1.60e-19,92;UBERON:0000956,3.77e-17,21;UBERON:0001869,3.77e-17,21;UBERON:0000203,3.77e-17,21;UBERON:0002619,2.24e-13,17;UBERON:0002021,1.63e-11,10;UBERON:0000411,1.63e-11,10;UBERON:0001950,1.63e-11,10;UBERON:0002420,3.24e-07,8;UBERON:0007245,3.24e-07,8;UBERON:0010009,3.24e-07,8;UBERON:0010011,3.24e-07,8;UBERON:0000454,3.24e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,0,0,0,5.86717736492834,6.87688273053643,5.07065122804943,0,0,0,0,0,0,1.15265491596466,9.95420278161385,9.04539786822327,7.99234853135252,1.71390590642282,3.75476519617743,8.45186514583183,8.53024692062304,4.5960939330501,4.40463523997555,7.2781782708557,6.60508093001847,8.30883612700221,6.67859798297591,7.29278718779464,3.35019598801657,1.68828783009504,3.97275444219706,2.65165726926301,2.84743361598206,4.47358669980721,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,1.63286352971307,1.04091196059682,0.608930956624282,0.461230994512117,0.904335843315735,0.470354828542819,0.628332956648377,0,0.578397427679647,0,0.647067399789637,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,4.94309110035915,6.8625090422794,5.78010019719176,19.9897968221118,15.0872119824895,6.85700547046548,10.5456820994042,0.407357455401265,0,0,1.26265113531884,1.56144531555244,1.37941262660084,2.70093194708024,4.67184935290717,5.57899293040888,7.68682321709099,5.80950692270319,3.88055056108524,0,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.771335564436891,0,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,24.6039239820029,9.77593817603202,0,0,0.213288250535234,1.39342003116263,1.15980715189884,0.403367049246685,0,0.760902504450237,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.775809948670503,0.280543279561274,1.01178459398812,0.147610147979602,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.472905432318573,0,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,2.24770825982909,2.93029216480508,0,0.252470927204373,3.15508219416257,3.12350995437311,2.80050417052639,1.67278158566786,1.78238939265915,2.26461224631066,2.02405350837447,2.63030272120181,2.76701444562566,9.63963949265421,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,0.316036757935816,0,0,0.680879211507576,1.8006109403131,1.4229455216103,1.07168517515796,0.354680467284547,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0,1.6488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,1.8542530201051,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.813277868507395,0.432021363287205,0.209088296014469,0,0,0.578574190077352,0,0,1.86401793926078,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,18.0720589637461,19.3336599333014,23.4887160510153,20.9660882459299,19.182310553578,13.5970901530146,12.1504050041725,12.158672487054,14.9536994964788,18.1216109113137,2.69847103718859,3.59122386060928,2.39027048055788,0.729320151204882,1.67690530102386,0.919217542250071,2.00022055021454,1.23621034343337,1.92551525755089,1.51618327058278,2.02783439912192,1.69763707247469,1.40462261204824,1.85672941974121,1.43588672389033,2.38146845641537,1.97003354106254,1.54327376370964,2.06042950401653,1.47198920134397,0.685738504770831,1.06485483695602,1.43061713968393,1.30811774969096,1.12931256498397,1.94613598150856,1.46342378298218,1.31534855718921,0.950628796921032,0.561142271657738,1.06771516311757,0.985044823755635,1.22769312950907,1.54936841185966,1.15743966588685,2.49810577937946,0.935726433781634,1.71896843238639,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Rnf165 | |||
}} |
Revision as of 03:47, 6 August 2015
Short description: | p3@Rnf165 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnf165_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000026494, NM_001164504, uc008frj.2, uc008frm.2_5end |
EntrezGene: | 225743 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.30e-22 | 33 |
neuronal stem cell | 1.30e-22 | 33 |
neuroblast | 1.30e-22 | 33 |
electrically signaling cell | 1.30e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.56e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-18 | 23 |
electrically responsive cell | 2.78e-17 | 39 |
electrically active cell | 2.78e-17 | 39 |
neural cell | 1.68e-15 | 43 |
ectodermal cell | 6.97e-15 | 44 |
neurectodermal cell | 6.97e-15 | 44 |