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{{FFCP|EntrezGene=210027|HGNC=|MCL_coexpression_id=1|UniProt=Q1LZI2|association_with_transcript=0bp_to_ENSMUST00000108759,NM_175434,uc009nyt.1_5end|description=CAGE_peak_1_at_Slc35f3_5end|id=chr8:128822426..128822494,+|ontology_enrichment_celltype=CL:0000117!6.01e-08!23;CL:0000337!6.01e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.05e-07,23;CL:0000337,3.05e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.41e-26!63;UBERON:0001049!1.14e-23!52;UBERON:0005068!1.14e-23!52;UBERON:0006241!1.14e-23!52;UBERON:0007135!1.14e-23!52;UBERON:0004121!3.92e-23!102;UBERON:0000924!3.92e-23!102;UBERON:0006601!3.92e-23!102;UBERON:0002346!4.29e-23!71;UBERON:0003075!4.29e-23!71;UBERON:0007284!4.29e-23!71;UBERON:0001017!5.47e-23!73;UBERON:0005743!5.47e-23!73;UBERON:0000955!8.17e-22!50;UBERON:0006238!8.17e-22!50;UBERON:0000073!1.66e-21!75;UBERON:0001016!1.66e-21!75;UBERON:0002616!3.76e-21!49;UBERON:0003056!2.84e-20!49;UBERON:0000153!8.78e-17!94;UBERON:0003080!9.73e-17!40;UBERON:0007811!3.45e-16!86;UBERON:0002780!4.02e-16!39;UBERON:0001890!4.02e-16!39;UBERON:0006240!4.02e-16!39;UBERON:0002020!1.18e-15!34;UBERON:0002791!3.35e-12!29;UBERON:0003528!3.35e-12!29;UBERON:0001893!3.35e-12!29;UBERON:0002619!5.50e-10!17;UBERON:0000956!7.79e-09!21;UBERON:0001869!7.79e-09!21;UBERON:0000203!7.79e-09!21;UBERON:0000489!1.01e-07!21;UBERON:0003076!1.28e-07!12;UBERON:0003057!1.28e-07!12;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-29,64;UBERON:0003075,1.77e-29,64;UBERON:0007284,1.77e-29,64;UBERON:0000073,2.77e-29,54;UBERON:0001049,1.41e-27,52;UBERON:0005068,1.41e-27,52;UBERON:0006241,1.41e-27,52;UBERON:0007135,1.41e-27,52;UBERON:0010371,1.75e-27,73;UBERON:0004121,2.78e-27,95;UBERON:0000924,2.78e-27,95;UBERON:0006601,2.78e-27,95;UBERON:0001017,2.15e-26,73;UBERON:0001016,3.56e-25,75;UBERON:0000955,1.98e-22,47;UBERON:0006238,1.98e-22,47;UBERON:0003056,8.28e-22,49;UBERON:0002616,1.46e-21,46;UBERON:0002020,4.78e-18,34;UBERON:0010314,6.67e-18,92;UBERON:0003080,7.29e-18,40;UBERON:0002780,4.74e-17,39;UBERON:0001890,4.74e-17,39;UBERON:0006240,4.74e-17,39;UBERON:0003528,2.03e-13,29;UBERON:0002791,2.03e-13,29;UBERON:0001893,2.03e-13,29;UBERON:0002619,2.69e-11,17;UBERON:0003076,1.44e-10,12;UBERON:0003057,1.44e-10,12;UBERON:0002021,6.51e-10,10;UBERON:0000411,6.51e-10,10;UBERON:0001950,6.51e-10,10;UBERON:0000956,1.10e-09,21;UBERON:0001869,1.10e-09,21;UBERON:0000203,1.10e-09,21;UBERON:0000489,1.01e-08,21;UBERON:0002240,2.00e-07,6;UBERON:0005174,2.00e-07,6;UBERON:0001137,2.00e-07,6|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,7.24964403023757,14.5822424305713,1.1198913730029,4.31257693094915,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0.135005938331691,0,19.4242669394586,14.7981922437581,0.857435594504678,0.766763768145891,1.83843757322004,15.4162233399144,8.42736431362239,9.5236050618871,0.791317726381163,1.28082701043374,1.04182674111352,11.1673199600552,7.87867654044352,11.6126668310376,22.9810296669461,19.6472919502762,6.15118171223492,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,6.61964072950398,0,0,0,0,0,0.505524445014783,3.08296475241462,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0,0,0,17.2740670236813,19.6879904404648,0,0,0,0,10.6351353977424,16.9275223042892,4.90051973240171,15.4703644971126,16.1100738118108,8.93488591606108,12.6548185192851,2.24046600470696,0.497627882440372,1.51633655060205,1.47309299120532,0.780722657776222,1.37941262660084,1.98068342785884,2.26057226753573,3.19771546011241,2.3060469651273,3.18585863503078,3.62184719034622,0,0.567318240503458,1.40760899331159,1.7535658594206,1.94633074457919,1.74126083261083,0.411564272815887,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,12.8276868624118,2.77842453424068,0,0,0,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,2.03651327845314,1.35766741017338,2.24434623649019,7.46191138066236,16.0895061297766,13.3448918665169,13.8204823592417,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,1.93155722413313,9.79358598925531,13.83097901788,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,10.9249247583414,1.13552068166615,0.534196811001766,0.325773918707152,1.48473110675282,0,0,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0,0,0,3.40439605753788,0.900305470156551,0.646793418913773,2.14337035031592,3.01478397191865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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:210027
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q1LZI2
|association_with_transcript=0bp_to_ENSMUST00000108759,NM_175434,uc009nyt.1_5end
|cluster_id=chr8:128822426..128822494,+
|description=CAGE_peak_1_at_Slc35f3_5end
|id=chr8:128822426..128822494,+
|ontology_enrichment_celltype=CL:0000117!6.01e-08!23;CL:0000337!6.01e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.05e-07,23;CL:0000337,3.05e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.41e-26!63;UBERON:0001049!1.14e-23!52;UBERON:0005068!1.14e-23!52;UBERON:0006241!1.14e-23!52;UBERON:0007135!1.14e-23!52;UBERON:0004121!3.92e-23!102;UBERON:0000924!3.92e-23!102;UBERON:0006601!3.92e-23!102;UBERON:0002346!4.29e-23!71;UBERON:0003075!4.29e-23!71;UBERON:0007284!4.29e-23!71;UBERON:0001017!5.47e-23!73;UBERON:0005743!5.47e-23!73;UBERON:0000955!8.17e-22!50;UBERON:0006238!8.17e-22!50;UBERON:0000073!1.66e-21!75;UBERON:0001016!1.66e-21!75;UBERON:0002616!3.76e-21!49;UBERON:0003056!2.84e-20!49;UBERON:0000153!8.78e-17!94;UBERON:0003080!9.73e-17!40;UBERON:0007811!3.45e-16!86;UBERON:0002780!4.02e-16!39;UBERON:0001890!4.02e-16!39;UBERON:0006240!4.02e-16!39;UBERON:0002020!1.18e-15!34;UBERON:0002791!3.35e-12!29;UBERON:0003528!3.35e-12!29;UBERON:0001893!3.35e-12!29;UBERON:0002619!5.50e-10!17;UBERON:0000956!7.79e-09!21;UBERON:0001869!7.79e-09!21;UBERON:0000203!7.79e-09!21;UBERON:0000489!1.01e-07!21;UBERON:0003076!1.28e-07!12;UBERON:0003057!1.28e-07!12;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-29,64;UBERON:0003075,1.77e-29,64;UBERON:0007284,1.77e-29,64;UBERON:0000073,2.77e-29,54;UBERON:0001049,1.41e-27,52;UBERON:0005068,1.41e-27,52;UBERON:0006241,1.41e-27,52;UBERON:0007135,1.41e-27,52;UBERON:0010371,1.75e-27,73;UBERON:0004121,2.78e-27,95;UBERON:0000924,2.78e-27,95;UBERON:0006601,2.78e-27,95;UBERON:0001017,2.15e-26,73;UBERON:0001016,3.56e-25,75;UBERON:0000955,1.98e-22,47;UBERON:0006238,1.98e-22,47;UBERON:0003056,8.28e-22,49;UBERON:0002616,1.46e-21,46;UBERON:0002020,4.78e-18,34;UBERON:0010314,6.67e-18,92;UBERON:0003080,7.29e-18,40;UBERON:0002780,4.74e-17,39;UBERON:0001890,4.74e-17,39;UBERON:0006240,4.74e-17,39;UBERON:0003528,2.03e-13,29;UBERON:0002791,2.03e-13,29;UBERON:0001893,2.03e-13,29;UBERON:0002619,2.69e-11,17;UBERON:0003076,1.44e-10,12;UBERON:0003057,1.44e-10,12;UBERON:0002021,6.51e-10,10;UBERON:0000411,6.51e-10,10;UBERON:0001950,6.51e-10,10;UBERON:0000956,1.10e-09,21;UBERON:0001869,1.10e-09,21;UBERON:0000203,1.10e-09,21;UBERON:0000489,1.01e-08,21;UBERON:0002240,2.00e-07,6;UBERON:0005174,2.00e-07,6;UBERON:0001137,2.00e-07,6
|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,7.24964403023757,14.5822424305713,1.1198913730029,4.31257693094915,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0.135005938331691,0,19.4242669394586,14.7981922437581,0.857435594504678,0.766763768145891,1.83843757322004,15.4162233399144,8.42736431362239,9.5236050618871,0.791317726381163,1.28082701043374,1.04182674111352,11.1673199600552,7.87867654044352,11.6126668310376,22.9810296669461,19.6472919502762,6.15118171223492,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,6.61964072950398,0,0,0,0,0,0.505524445014783,3.08296475241462,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0,0,0,17.2740670236813,19.6879904404648,0,0,0,0,10.6351353977424,16.9275223042892,4.90051973240171,15.4703644971126,16.1100738118108,8.93488591606108,12.6548185192851,2.24046600470696,0.497627882440372,1.51633655060205,1.47309299120532,0.780722657776222,1.37941262660084,1.98068342785884,2.26057226753573,3.19771546011241,2.3060469651273,3.18585863503078,3.62184719034622,0,0.567318240503458,1.40760899331159,1.7535658594206,1.94633074457919,1.74126083261083,0.411564272815887,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,12.8276868624118,2.77842453424068,0,0,0,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,2.03651327845314,1.35766741017338,2.24434623649019,7.46191138066236,16.0895061297766,13.3448918665169,13.8204823592417,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,1.93155722413313,9.79358598925531,13.83097901788,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,10.9249247583414,1.13552068166615,0.534196811001766,0.325773918707152,1.48473110675282,0,0,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0,0,0,3.40439605753788,0.900305470156551,0.646793418913773,2.14337035031592,3.01478397191865,1.42695054081656,2.79733335023606,2.43571959291679,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,17.0591277849669,0,0,0,0,0,0,0,0,0,0,0.949007980743406,2.23651413839534,0.86404272657441,1.67270636811575,1.09181281873089,0.404593039154462,0.247960367176008,0,0,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.258319646955462,0.337912250981556,0.234714477291508,0.5208175393758,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,2.26730383615211,0.221985953374065,0,0,0,0.187682475451182,0.36630324853453,0.214368379079066,0,10.7302850097243,11.9684561491866,6.30185064783336,7.21783365843488,10.2762377965596,8.3093328712867,12.1504050041725,12.6089936902782,16.7662691324156,13.9795284172991,0.103787347584177,0,1.02440163452481,1.21553358534147,0.628839487883947,0.919217542250071,1.55572709461131,1.03017528619447,1.28367683836726,1.01078884705519,1.77435509923168,0.754505365544305,0.749132059759059,1.21647789569252,1.20614484806788,0.476293691283074,1.27472758539341,1.73618298417335,1.64834360321323,1.03039244094078,1.71434626192708,0.70990322463735,0.476872379894642,1.16277133305863,0.941093804153306,1.60767754994185,0.914639864363863,0.526139422875686,0.814824683075171,1.12228454331548,1.54225523561426,1.67457620038458,0,1.39443157067369,0.964533054905707,1.99848462350357,1.87145286756327,0.859484216193193,2.10417165275728,0.661774257358546,0.463735671240843
|short_description=p1@Slc35f3
}}

Revision as of 03:48, 6 August 2015

Short description:p1@Slc35f3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc35f3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000108759, NM_175434, uc009nyt.1_5end
EntrezGene:210027
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc35f3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B212.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D57.46
kidney, neonate N20.CNhs11113.832-19I116.09
kidney, neonate N25.CNhs11122.1353-25F313.34
kidney, neonate N30.CNhs11203.1385-42H113.82
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A313.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.05e-0723
neuroblast (sensu Vertebrata)3.05e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm1.77e-2964
neural plate1.77e-2964
presumptive neural plate1.77e-2964
regional part of nervous system2.77e-2954
neural tube1.41e-2752
neural rod1.41e-2752
future spinal cord1.41e-2752
neural keel1.41e-2752
ecto-epithelium1.75e-2773
ectoderm-derived structure2.78e-2795
ectoderm2.78e-2795
presumptive ectoderm2.78e-2795
central nervous system2.15e-2673
nervous system3.56e-2575
brain1.98e-2247
future brain1.98e-2247
pre-chordal neural plate8.28e-2249
regional part of brain1.46e-2146
gray matter4.78e-1834
structure with developmental contribution from neural crest6.67e-1892
anterior neural tube7.29e-1840
regional part of forebrain4.74e-1739
forebrain4.74e-1739
future forebrain4.74e-1739
brain grey matter2.03e-1329
regional part of telencephalon2.03e-1329
telencephalon2.03e-1329
regional part of cerebral cortex2.69e-1117
posterior neural tube1.44e-1012
chordal neural plate1.44e-1012
occipital lobe6.51e-1010
visual cortex6.51e-1010
neocortex6.51e-1010
cerebral cortex1.10e-0921
cerebral hemisphere1.10e-0921
pallium1.10e-0921
cavitated compound organ1.01e-0821
spinal cord2.00e-076
dorsal region element2.00e-076
dorsum2.00e-076
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