FFCP PHASE1:Mm9::chr6:97202717..97202731,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=320502|HGNC=|MCL_coexpression_id=35|UniProt=E9QA62,A0JP45|association_with_transcript=42bp_to_ENSMUST00000095655,NM_001081157,uc009das.1_5end|description=CAGE_peak_2_at_Lmod3_5end|id=chr6:97202717..97202731,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.03e-09!18;UBERON:0000948!3.03e-09!18;UBERON:0005498!3.03e-09!18;UBERON:0004140!3.03e-09!18;UBERON:0009881!3.03e-09!18;UBERON:0004141!3.03e-09!18;UBERON:0003084!3.03e-09!18;UBERON:0007005!3.03e-09!18;UBERON:0004139!3.03e-09!18;UBERON:0004291!3.03e-09!18;UBERON:0003102!6.62e-09!23;UBERON:0004535!6.79e-07!23;UBERON:0001009!6.79e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.27e-11,18;UBERON:0000948,2.27e-11,18;UBERON:0005498,2.27e-11,18;UBERON:0004140,2.27e-11,18;UBERON:0009881,2.27e-11,18;UBERON:0004141,2.27e-11,18;UBERON:0003084,2.27e-11,18;UBERON:0007005,2.27e-11,18;UBERON:0004139,2.27e-11,18;UBERON:0004291,2.27e-11,18;UBERON:0003102,7.41e-10,22;UBERON:0000026,1.35e-09,12;UBERON:0004708,1.35e-09,12;UBERON:0002101,1.35e-09,12;UBERON:0004357,1.35e-09,12;UBERON:0004347,1.35e-09,12;UBERON:0005732,1.35e-09,12;UBERON:0005733,1.35e-09,12;UBERON:0010707,1.21e-08,13;UBERON:0004535,5.32e-08,23;UBERON:0001009,5.32e-08,23;UBERON:0005418,3.42e-07,5;UBERON:0002472,3.42e-07,5;UBERON:0008784,3.42e-07,5;UBERON:0006058,3.42e-07,5;UBERON:0004709,3.42e-07,5;UBERON:0002529,3.42e-07,5;UBERON:0010538,3.42e-07,5;UBERON:0005420,3.42e-07,5;UBERON:0010758,3.42e-07,5;UBERON:0000978,3.42e-07,5;UBERON:0002103,3.42e-07,5;UBERON:0000376,3.42e-07,5;UBERON:0000154,3.42e-07,5;UBERON:0010709,3.42e-07,5;UBERON:0005730,3.42e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,9.69066498909088,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.587943535678524,0,0,0.722996784599558,2.65383165584962,22.0002915928476,6.62524555381181,10.6672555689749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,0,1.26265113531884,0,0.229902104433473,0.720248519221397,1.65775299619287,1.36072998302656,1.7935920839879,1.03071897015702,1.29351685369508,0,1.51284864134255,1.23165786914764,1.7535658594206,1.11218899690239,3.83077383174383,3.49829631893504,0.199034266818493,0,0,0,1.86413195281952,1.87620847984877,1.62055855314913,1.42046841351126,2.95146347621106,3.39387648352232,4.41814495025775,5.36546802799238,3.97002164048376,4.11399624783701,11.1633875573785,12.3224590509701,10.6725990820493,9.44065495751518,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,5.75072826109418,0,2.18426371180192,0.252578877947112,1.07638448113147,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.478364305972461,1.14704320301017,0.518054945597687,0,0,0,0,0,0,0,0,25.4995636476417,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0,0,0,0,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,9.8931751764888,2.9063596805263,4.16159182004275,0.835606408021955,1.31312719796049,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.165306911450672,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,2.88030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0,0,0,0,0,0,0,11.5632495643758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.853668028770671,3.40349403895612,1.25767897576789,0.735374033800057,3.55594764482584,4.73880631649457,2.56735367673452,3.28506375292937,3.29523089857312,4.71565853465191,7.58496210506047,6.4665403928918,8.55788487438638,7.1444053692461,6.83717523074647,4.82273051159263,7.41754621445952,5.00476328456951,6.51451579532289,5.85670160325814,5.96090474868302,4.21504608233753,5.17601592284318,6.51532480765909,5.67076715905595,3.6829759601298,5.43216455383447,1.68342681497322,4.98267076121531,6.50129583678719,4.50154147486658,7.12709469455443,3.47231899766054,2.24829520144151,6.31615342802603,6.01638951335235,10.3295699317175,9.9266138603782,11.5933917810211|short_description=p2@Lmod3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320502 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QA62,uniprot:A0JP45 | |||
|association_with_transcript=42bp_to_ENSMUST00000095655,NM_001081157,uc009das.1_5end | |||
|cluster_id=chr6:97202717..97202731,- | |||
|description=CAGE_peak_2_at_Lmod3_5end | |||
|id=chr6:97202717..97202731,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.03e-09!18;UBERON:0000948!3.03e-09!18;UBERON:0005498!3.03e-09!18;UBERON:0004140!3.03e-09!18;UBERON:0009881!3.03e-09!18;UBERON:0004141!3.03e-09!18;UBERON:0003084!3.03e-09!18;UBERON:0007005!3.03e-09!18;UBERON:0004139!3.03e-09!18;UBERON:0004291!3.03e-09!18;UBERON:0003102!6.62e-09!23;UBERON:0004535!6.79e-07!23;UBERON:0001009!6.79e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.27e-11,18;UBERON:0000948,2.27e-11,18;UBERON:0005498,2.27e-11,18;UBERON:0004140,2.27e-11,18;UBERON:0009881,2.27e-11,18;UBERON:0004141,2.27e-11,18;UBERON:0003084,2.27e-11,18;UBERON:0007005,2.27e-11,18;UBERON:0004139,2.27e-11,18;UBERON:0004291,2.27e-11,18;UBERON:0003102,7.41e-10,22;UBERON:0000026,1.35e-09,12;UBERON:0004708,1.35e-09,12;UBERON:0002101,1.35e-09,12;UBERON:0004357,1.35e-09,12;UBERON:0004347,1.35e-09,12;UBERON:0005732,1.35e-09,12;UBERON:0005733,1.35e-09,12;UBERON:0010707,1.21e-08,13;UBERON:0004535,5.32e-08,23;UBERON:0001009,5.32e-08,23;UBERON:0005418,3.42e-07,5;UBERON:0002472,3.42e-07,5;UBERON:0008784,3.42e-07,5;UBERON:0006058,3.42e-07,5;UBERON:0004709,3.42e-07,5;UBERON:0002529,3.42e-07,5;UBERON:0010538,3.42e-07,5;UBERON:0005420,3.42e-07,5;UBERON:0010758,3.42e-07,5;UBERON:0000978,3.42e-07,5;UBERON:0002103,3.42e-07,5;UBERON:0000376,3.42e-07,5;UBERON:0000154,3.42e-07,5;UBERON:0010709,3.42e-07,5;UBERON:0005730,3.42e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,9.69066498909088,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.587943535678524,0,0,0.722996784599558,2.65383165584962,22.0002915928476,6.62524555381181,10.6672555689749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,0,1.26265113531884,0,0.229902104433473,0.720248519221397,1.65775299619287,1.36072998302656,1.7935920839879,1.03071897015702,1.29351685369508,0,1.51284864134255,1.23165786914764,1.7535658594206,1.11218899690239,3.83077383174383,3.49829631893504,0.199034266818493,0,0,0,1.86413195281952,1.87620847984877,1.62055855314913,1.42046841351126,2.95146347621106,3.39387648352232,4.41814495025775,5.36546802799238,3.97002164048376,4.11399624783701,11.1633875573785,12.3224590509701,10.6725990820493,9.44065495751518,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,5.75072826109418,0,2.18426371180192,0.252578877947112,1.07638448113147,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.478364305972461,1.14704320301017,0.518054945597687,0,0,0,0,0,0,0,0,25.4995636476417,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0,0,0,0,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,9.8931751764888,2.9063596805263,4.16159182004275,0.835606408021955,1.31312719796049,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.165306911450672,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,2.88030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0,0,0,0,0,0,0,11.5632495643758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.853668028770671,3.40349403895612,1.25767897576789,0.735374033800057,3.55594764482584,4.73880631649457,2.56735367673452,3.28506375292937,3.29523089857312,4.71565853465191,7.58496210506047,6.4665403928918,8.55788487438638,7.1444053692461,6.83717523074647,4.82273051159263,7.41754621445952,5.00476328456951,6.51451579532289,5.85670160325814,5.96090474868302,4.21504608233753,5.17601592284318,6.51532480765909,5.67076715905595,3.6829759601298,5.43216455383447,1.68342681497322,4.98267076121531,6.50129583678719,4.50154147486658,7.12709469455443,3.47231899766054,2.24829520144151,6.31615342802603,6.01638951335235,10.3295699317175,9.9266138603782,11.5933917810211 | |||
|short_description=p2@Lmod3 | |||
}} |
Revision as of 08:54, 6 August 2015
Short description: | p2@Lmod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lmod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 42bp_to_ENSMUST00000095655, NM_001081157, uc009das.1_5end |
EntrezGene: | 320502 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.27e-11 | 18 |
heart | 2.27e-11 | 18 |
primitive heart tube | 2.27e-11 | 18 |
primary heart field | 2.27e-11 | 18 |
anterior lateral plate mesoderm | 2.27e-11 | 18 |
heart tube | 2.27e-11 | 18 |
heart primordium | 2.27e-11 | 18 |
cardiac mesoderm | 2.27e-11 | 18 |
cardiogenic plate | 2.27e-11 | 18 |
heart rudiment | 2.27e-11 | 18 |
surface structure | 7.41e-10 | 22 |
appendage | 1.35e-09 | 12 |
paired limb/fin | 1.35e-09 | 12 |
limb | 1.35e-09 | 12 |
paired limb/fin bud | 1.35e-09 | 12 |
limb bud | 1.35e-09 | 12 |
limb/fin field | 1.35e-09 | 12 |
limb field | 1.35e-09 | 12 |
appendage girdle complex | 1.21e-08 | 13 |
cardiovascular system | 5.32e-08 | 23 |
circulatory system | 5.32e-08 | 23 |
hindlimb bud | 3.42e-07 | 5 |
stylopod | 3.42e-07 | 5 |
lower limb segment | 3.42e-07 | 5 |
multi-limb segment region | 3.42e-07 | 5 |
pelvic appendage | 3.42e-07 | 5 |
limb segment | 3.42e-07 | 5 |
paired limb/fin segment | 3.42e-07 | 5 |
pelvic appendage bud | 3.42e-07 | 5 |
subdivision of organism along appendicular axis | 3.42e-07 | 5 |
leg | 3.42e-07 | 5 |
hindlimb | 3.42e-07 | 5 |
hindlimb stylopod | 3.42e-07 | 5 |
posterior region of body | 3.42e-07 | 5 |
pelvic complex | 3.42e-07 | 5 |
hindlimb/pelvic fin field | 3.42e-07 | 5 |