FFCP PHASE1:Hg19::chr9:131182697..131182748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51148 | |EntrezGene=51148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23723 | |HGNC=23723 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4B2 | |UniProt=Q5T4B2 | ||
|association_with_transcript=-10bp_to_ENST00000372838,NM_016174,uc004buz.3_5end | |association_with_transcript=-10bp_to_ENST00000372838,NM_016174,uc004buz.3_5end | ||
|cluster_id=chr9:131182697..131182748,+ | |||
|description=CAGE_peak_4_at_CERCAM_5end | |description=CAGE_peak_4_at_CERCAM_5end | ||
|id=chr9:131182697..131182748,+ | |id=chr9:131182697..131182748,+ | ||
|ontology_enrichment_celltype=CL:0000349;1.50e-10;19!CL:0000134;1.94e-07;55!CL:0000723;8.76e-07;61 | |ontology_enrichment_celltype=CL:0000055!1.07e-16!180;CL:0000057!8.17e-11!75;CL:0000220!4.98e-07!246;CL:0002321!9.41e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;1.50e-10;19!CL:0000134;1.94e-07;55!CL:0000723;8.76e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.75e-10,19;CL:0000057,1.15e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;4.43e-09;24!UBERON:0005631;9.74e-09;10!UBERON:0000158;9.74e-09;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.15e-18!365;UBERON:0002100!2.88e-11!216;UBERON:0000483!2.69e-10!309;UBERON:0000468!4.26e-10!659;UBERON:0000119!6.17e-10!312;UBERON:0005631!3.72e-09!14;UBERON:0000158!3.72e-09!14;UBERON:0004111!5.38e-09!241;UBERON:0000481!2.43e-08!347;UBERON:0000478!1.14e-07!24;UBERON:0000467!1.78e-07!625;UBERON:0005256!2.19e-07!143;UBERON:0000477!2.82e-07!286;UBERON:0000480!2.85e-07!626;UBERON:0000025!3.20e-07!194;UBERON:0000914!4.89e-07!83;UBERON:0002329!4.89e-07!83;UBERON:0003077!4.89e-07!83;UBERON:0003059!4.89e-07!83;UBERON:0007282!4.89e-07!83;UBERON:0009618!4.89e-07!83;UBERON:0007285!4.89e-07!83;UBERON:0000486!7.00e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.43e-09;24!UBERON:0005631;9.74e-09;10!UBERON:0000158;9.74e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.28e-11,14;UBERON:0000158,6.28e-11,14;UBERON:0000478,1.24e-08,24;UBERON:0004923,8.74e-08,66;UBERON:0006554,2.12e-07,47;UBERON:0000483,2.53e-07,306;UBERON:0002100,4.13e-07,199;UBERON:0001008,5.04e-07,48;UBERON:0000119,6.32e-07,309;UBERON:0003104,7.86e-07,160;UBERON:0009142,7.86e-07,160;UBERON:0004871,9.52e-07,8 | |||
|phase1_expression=3.63356758541113,2.14100523890983,4.36958652697511,2.00146596706261,2.23480547213644,3.48935409640147,0,1.89515962028049,2.87304191019822,1.47440361900905,2.79120467188971,10.0483031179879,18.9912224324487,1.73272894144065,1.32558950291166,0,3.01347264011988,1.46062018077475,2.92759679274304,0.738726348460727,0.816002764977012,3.13454721478088,0.286235987131057,0.273748850145768,1.88313959392204,0.0764134057479513,0,0,0,0,0,1.83884244895785,0.90361775633475,1.47901604066715,0,0,0.587200878669695,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,1.34140171940727,1.66221330396589,2.1686349143074,3.00802746381534,3.47631645505977,0.795285947051099,1.94653948121054,0.283604451492204,0.443458794925128,0.263504357079378,0.785874452986276,1.82147644146271,1.11235332835329,0,0.174129737299267,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,2.82653970962005,3.35599548967925,1.37559020970034,0.835979866147242,0.775250277507987,0.35576626268671,1.00416183829401,2.01414658554573,1.52054421143703,3.90499292077071,0,2.43042584364528,0.17859945656816,0,0.337834441449967,1.53316637465883,0,0.732806975721629,0,0,1.74437620857014,5.4666914686485,1.8994576749687,4.50191214764944,3.15520282823695,3.54668382198357,1.12135520028461,4.2699598291882,5.18001851676036,0.622422070799533,1.34710672069688,0.817309515567294,0.756787138224657,0.576175924479999,1.40592859100278,0.312160076830321,1.71141546463335,1.64393548606981,0.469737994575059,0.161872944368132,0.280901613404497,1.02077085627447,0.737005903870608,1.54988671763648,2.37600571456411,4.94533858557114,0.910161361938026,6.46756327634615,0.336672227908132,0.500474079487857,0.554128230968366,2.63386572528503,1.22595118319608,3.90618953157152,0.907457465280168,1.61450672119976,4.48470516518992,2.33125091275518,4.20127534518163,1.13357782162283,2.31876486041066,5.02515512095292,3.71307930930786,2.24105111870757,1.51460264546469,3.68199594569197,2.58633690910099,5.68015348026583,1.61203357164224,0.67824236924195,2.51239109112286,1.09098448236334,1.72082757233402,0.121973706129595,0.132529768321485,0.69716365721711,0.518305275076852,0.756962552626885,0,3.12899064659632,3.85944562915731,2.76269842704961,0.464367928031979,3.60939740834793,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0.653638332277218,0,0.134831308160164,0.392442930250692,0,0,2.80483547606892,2.8810180793198,8.82052268313252,0,0,0,0,0.122988438543114,1.02940686179115,2.19500570817251,0,0.301586917234893,0.648119116109707,0,1.03993478527958,0,0.34779121492523,2.23076519048061,0.433099343283221,0.462985512576611,0.761016608938393,3.95102198979638,3.43394464837949,0,0,0,1.87467667973554,4.19955320497149,1.70130116690864,0.985143749731331,0.290633938513962,2.68367875415648,0,0.704387472105808,0.621984346622316,0,0.25248486685276,0.888970520090367,4.96584953225761,1.17217447210047,0,0.616964956219941,0.901029173531752,0.857479297891735,0.112131084345361,0.43596006883328,0.22001485746285,3.36106460970222,21.4593867511129,1.690605505112,3.19125739901845,1.04007436911366,0.257207374262142,0,0.532844358032199,2.00169191121407,2.17048642156577,0.823240336780769,1.62868092146868,1.06617584622764,0,5.42590878707255,2.61460037580088,2.0994328148232,0,0,0,3.11512312139057,3.44585807502342,0,2.17171960001369,2.26023954805422,2.32779252211864,0,0,0.646882724578552,0,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0.414415513436035,1.2269149171914,2.00068208423871,1.89885516589815,2.9115920614313,2.85486382075459,2.36553622550902,4.21709093973768,4.8151375956435,4.5481500811197,3.10419213877515,2.65690239414175,3.68738337083406,1.99832313276591,1.95801157462741,2.74514739048685,0,0,0,2.12189300012382,16.6435439510497,9.07170879989041,3.96972492510043,4.29693525206575,5.3325417942284,5.50998341799514,2.04682899626681,6.27330292460069,2.96836132889982,0.154209693802656,2.66342587969691,1.39616165223476,1.03850885836724,1.16210378459959,0.362578348774867,3.60911646545913,1.28913384510255,0.918515585316854,1.27463817604702,4.19598127870157,3.60959690325929,2.84956747286335,3.13739907670742,1.46139224653261,4.22206515571503,0,0.170093705276516,0,4.62681758070868,2.43851793789468,8.02703638167765,2.29388645740534,3.3243040357149,1.34324852833307,0,0,0,0.328014645699706,1.30151357865721,1.23649213977267,1.19040304263846,0.990113999047056,3.44559322797703,1.30012049207304,8.03419649220798,2.70678011217942,0.462145851343933,0.15350367472613,0.137836572484531,1.18162269355101,1.74020032697074,0.426133137080504,1.78064071293475,1.4875642382488,1.53752053892085,1.27612712494584,2.2254711788221,2.32422774648643,10.3888074454111,2.0911118104818,0.616067160352178,1.59691809095107,2.60979897622522,4.44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| ||
|short_description=p4@CERCAM | |short_description=p4@CERCAM | ||
}} | }} |
Latest revision as of 19:35, 15 September 2015
Short description: | p4@CERCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CERCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000372838, NM_016174, uc004buz.3_5end |
EntrezGene: | CERCAM |
HGNC: | 23723 |
UniProt: | Q5T4B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.75e-10 | 19 |
fibroblast | 1.15e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.28e-11 | 14 |
membranous layer | 6.28e-11 | 14 |
extraembryonic structure | 1.24e-08 | 24 |
organ component layer | 8.74e-08 | 66 |
urinary system structure | 2.12e-07 | 47 |
epithelium | 2.53e-07 | 306 |
trunk | 4.13e-07 | 199 |
renal system | 5.04e-07 | 48 |
cell layer | 6.32e-07 | 309 |
mesenchyme | 7.86e-07 | 160 |
entire embryonic mesenchyme | 7.86e-07 | 160 |
somatic layer of lateral plate mesoderm | 9.52e-07 | 8 |