FFCP PHASE1:Hg19::chr16:25703274..25703350,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:25703274..25703350,+ to FFCP PHASE1:Hg19::chr16:25703274..25703350,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9951 | |EntrezGene=9951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5200 | |HGNC=5200 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y661 | |UniProt=Q9Y661 | ||
|association_with_transcript=0bp_to_ENST00000331351,NM_006040,uc002dof.2_5end | |||
|cluster_id=chr16:25703274..25703350,+ | |||
|coexpression_cluster_id=C1759 | |||
|description=CAGE_peak_1_at_HS3ST4_5end | |||
|id=chr16:25703274..25703350,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.08e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.66e-13;5!CL:0002321;3.78e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.25e-13,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-18;82 | |||
|ontology_enrichment_disease=DOID:3095!2.17e-09!22;DOID:2994!2.17e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:171;7.28e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.28e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.49e-58!57;UBERON:0005068!4.49e-58!57;UBERON:0006241!4.49e-58!57;UBERON:0007135!4.49e-58!57;UBERON:0005743!1.04e-55!86;UBERON:0001017!3.81e-55!82;UBERON:0000073!6.35e-55!94;UBERON:0001016!6.35e-55!94;UBERON:0002346!3.68e-49!90;UBERON:0002616!2.76e-48!59;UBERON:0000955!1.96e-47!69;UBERON:0006238!1.96e-47!69;UBERON:0001893!6.95e-44!34;UBERON:0002020!1.48e-43!34;UBERON:0003528!1.48e-43!34;UBERON:0003075!1.97e-43!86;UBERON:0007284!1.97e-43!86;UBERON:0002791!3.09e-42!33;UBERON:0002780!3.81e-42!41;UBERON:0001890!3.81e-42!41;UBERON:0006240!3.81e-42!41;UBERON:0001869!4.05e-41!32;UBERON:0003080!7.16e-41!42;UBERON:0007023!1.30e-38!115;UBERON:0002619!1.39e-33!22;UBERON:0003056!2.05e-31!61;UBERON:0000956!2.14e-31!25;UBERON:0000203!2.14e-31!25;UBERON:0001950!1.57e-30!20;UBERON:0000924!6.42e-30!173;UBERON:0006601!6.42e-30!173;UBERON:0000153!6.01e-29!129;UBERON:0007811!6.01e-29!129;UBERON:0000033!6.03e-29!123;UBERON:0004121!5.12e-26!169;UBERON:0003076!9.08e-18!15;UBERON:0003057!9.08e-18!15;UBERON:0004732!2.48e-15!13;UBERON:0004733!4.26e-14!12;UBERON:0002028!4.26e-14!12;UBERON:0007277!4.26e-14!12;UBERON:0000025!1.10e-13!194;UBERON:0002420!1.12e-13!9;UBERON:0007245!1.12e-13!9;UBERON:0010009!1.12e-13!9;UBERON:0010011!1.12e-13!9;UBERON:0000454!1.12e-13!9;UBERON:0002308!1.83e-13!9;UBERON:0000125!1.83e-13!9;UBERON:0004111!1.15e-11!241;UBERON:0009663!7.94e-11!7;UBERON:0000200!8.17e-11!6;UBERON:0001871!2.46e-10!7;UBERON:0002680!4.16e-10!9;UBERON:0001895!4.16e-10!9;UBERON:0010092!4.16e-10!9;UBERON:0000064!4.88e-10!219;UBERON:0002298!1.02e-09!8;UBERON:0002021!1.43e-09!5;UBERON:0000477!1.51e-09!286;UBERON:0001872!1.88e-09!5;UBERON:0000349!4.84e-09!5;UBERON:0000922!1.04e-08!612;UBERON:0000475!2.57e-07!365;UBERON:0000369!3.65e-07!4;UBERON:0002435!3.65e-07!4;UBERON:0000204!3.65e-07!4;UBERON:0010082!3.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.33e-58;22!UBERON:0003528;1.29e-57;34!UBERON:0002020;1.29e-57;34!UBERON:0001893;1.88e-57;34!UBERON:0001869;1.99e-56;32!UBERON:0002791;5.94e-56;32!UBERON:0001950;1.00e-52;20!UBERON:0000956;1.21e-50;25!UBERON:0000203;1.21e-50;25!UBERON:0002780;8.27e-46;41!UBERON:0001890;8.27e-46;41!UBERON:0000073;8.11e-43;53!UBERON:0002616;8.11e-43;53!UBERON:0000955;2.09e-32;68!UBERON:0001017;1.89e-30;75!UBERON:0001016;1.15e-26;83!UBERON:0002420;2.36e-18;9!UBERON:0007245;2.36e-18;9!UBERON:0010009;2.36e-18;9!UBERON:0010011;2.36e-18;9!UBERON:0000454;2.36e-18;9!UBERON:0000125;4.26e-18;9!UBERON:0002308;4.26e-18;9!UBERON:0000200;1.14e-17;6!UBERON:0002298;2.47e-16;6!UBERON:0002021;1.37e-15;5!UBERON:0004732;1.75e-15;13!UBERON:0001872;2.66e-15;5!UBERON:0001871;1.27e-14;6!UBERON:0000349;1.59e-14;5!UBERON:0009663;1.60e-13;7!UBERON:0004733;1.68e-13;12!UBERON:0002028;1.68e-13;12!UBERON:0002346;3.65e-13;4!UBERON:0000923;3.65e-13;4!UBERON:0010316;3.65e-13;4!UBERON:0005291;3.65e-13;4!UBERON:0007023;2.02e-11;114!UBERON:0000369;2.86e-11;4!UBERON:0002435;2.86e-11;4!UBERON:0000204;2.86e-11;4!UBERON:0011216;1.22e-10;132!UBERON:0002050;1.62e-10;5!UBERON:0005423;1.62e-10;5!UBERON:0001870;1.26e-09;3!UBERON:0000988;2.94e-09;3!UBERON:0001896;8.91e-09;3!UBERON:0005290;8.91e-09;3!UBERON:0005383;1.22e-08;3!UBERON:0005382;1.22e-08;3!UBERON:0000922;5.96e-08;49!UBERON:0002680;1.47e-07;9!UBERON:0001895;1.47e-07;9!UBERON:0010314;2.46e-07;132!UBERON:0001954;6.22e-07;2!UBERON:0003022;6.22e-07;2!UBERON:0002421;6.22e-07;2!UBERON:0002600;6.22e-07;2!UBERON:0002771;7.20e-07;2!UBERON:0002702;7.20e-07;2!UBERON:0003714;9.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.48e-79,56;UBERON:0005068,7.48e-79,56;UBERON:0006241,7.48e-79,56;UBERON:0007135,7.48e-79,56;UBERON:0000073,5.25e-76,53;UBERON:0002616,5.25e-76,53;UBERON:0001016,3.26e-73,89;UBERON:0001017,2.54e-72,81;UBERON:0000955,5.26e-70,68;UBERON:0006238,5.26e-70,68;UBERON:0001893,2.58e-68,34;UBERON:0003528,9.12e-68,34;UBERON:0002020,9.12e-68,34;UBERON:0002346,2.41e-65,86;UBERON:0001869,1.67e-63,32;UBERON:0002780,2.24e-63,41;UBERON:0001890,2.24e-63,41;UBERON:0003080,2.24e-63,41;UBERON:0006240,2.24e-63,41;UBERON:0002791,5.30e-63,32;UBERON:0002619,4.66e-58,22;UBERON:0003075,3.99e-56,82;UBERON:0007284,3.99e-56,82;UBERON:0001950,1.09e-52,20;UBERON:0000956,1.29e-50,25;UBERON:0000203,1.29e-50,25;UBERON:0003056,1.21e-45,61;UBERON:0004121,5.31e-43,171;UBERON:0000924,5.31e-43,171;UBERON:0006601,5.31e-43,171;UBERON:0010371,6.63e-42,104;UBERON:0010314,3.76e-34,132;UBERON:0007023,7.82e-34,114;UBERON:0011216,8.56e-27,223;UBERON:0002420,1.74e-18,9;UBERON:0007245,1.74e-18,9;UBERON:0010009,1.74e-18,9;UBERON:0010011,1.74e-18,9;UBERON:0000454,1.74e-18,9;UBERON:0000125,3.78e-18,9;UBERON:0002308,3.78e-18,9;UBERON:0000200,1.04e-17,6;UBERON:0000025,1.67e-17,192;UBERON:0002298,2.50e-16,6;UBERON:0003076,3.47e-16,15;UBERON:0003057,3.47e-16,15;UBERON:0002021,1.54e-15,5;UBERON:0004732,1.69e-15,13;UBERON:0001872,2.47e-15,5;UBERON:0001871,1.18e-14,6;UBERON:0000349,1.29e-14,5;UBERON:0009663,1.33e-13,7;UBERON:0004733,1.56e-13,12;UBERON:0002028,1.56e-13,12;UBERON:0007277,1.56e-13,12;UBERON:0004111,1.93e-13,240;UBERON:0000369,2.39e-11,4;UBERON:0002435,2.39e-11,4;UBERON:0000204,2.39e-11,4;UBERON:0010082,2.39e-11,4;UBERON:0001870,1.35e-09,3;UBERON:0000988,3.21e-09,3;UBERON:0001896,8.32e-09,3;UBERON:0005290,8.32e-09,3;UBERON:0010096,8.32e-09,3;UBERON:0005383,1.10e-08,3;UBERON:0005382,1.10e-08,3;UBERON:0000483,2.69e-08,306;UBERON:0000119,4.09e-08,309;UBERON:0000922,1.24e-07,592;UBERON:0002680,1.44e-07,9;UBERON:0001895,1.44e-07,9;UBERON:0010092,1.44e-07,9;UBERON:0001954,6.14e-07,2;UBERON:0003022,6.14e-07,2;UBERON:0002421,6.14e-07,2;UBERON:0002600,6.14e-07,2;UBERON:0002771,7.31e-07,2;UBERON:0002702,7.53e-07,2 | |||
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| ||
|short_description=p1@HS3ST4 | |||
}} | }} |
Latest revision as of 20:24, 15 September 2015
Short description: | p1@HS3ST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HS3ST4_5end |
Coexpression cluster: | C1759_neuroectodermal_neuroblastoma_peripheral_occipital_postcentral_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000331351, NM_006040, uc002dof.2_5end |
EntrezGene: | HS3ST4 |
HGNC: | 5200 |
UniProt: | Q9Y661 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.25e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.28e-11 | 10 |