FFCP PHASE1:Hg19::chr11:118175436..118175470,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118175436..118175470,+ to FFCP PHASE1:Hg19::chr11:118175436..118175470,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=916 | |EntrezGene=916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1674 | |HGNC=1674 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526146,ENST00000528435,ENST00000529713_5end | |||
|cluster_id=chr11:118175436..118175470,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_CD3E_5end | |||
|id=chr11:118175436..118175470,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.01e-40!140;CL:0000037!2.80e-35!172;CL:0000566!2.80e-35!172;CL:0002087!8.75e-32!119;CL:0000988!4.81e-31!182;CL:0002032!5.99e-31!165;CL:0000837!5.99e-31!165;CL:0002031!9.39e-30!124;CL:0000542!2.33e-22!53;CL:0000051!2.33e-22!53;CL:0000838!3.53e-22!52;CL:0000084!5.11e-19!25;CL:0000827!5.11e-19!25;CL:0000791!8.57e-18!18;CL:0000789!8.57e-18!18;CL:0002420!8.57e-18!18;CL:0002419!8.57e-18!18;CL:0000790!8.57e-18!18;CL:0000766!1.41e-12!76;CL:0000625!1.00e-11!11;CL:0000763!2.06e-11!112;CL:0000049!2.06e-11!112;CL:0002009!5.56e-10!65;CL:0000557!1.07e-09!71;CL:0002057!1.97e-09!42;CL:0002194!2.28e-09!63;CL:0000576!2.28e-09!63;CL:0000040!2.28e-09!63;CL:0000559!2.28e-09!63;CL:0000839!2.85e-09!70;CL:0000860!3.52e-08!45;CL:0000451!4.74e-07!10;CL:0000624!7.10e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.07e-23;25!CL:0000791;2.10e-21;18!CL:0000789;2.10e-21;18!CL:0002419;2.10e-21;18!CL:0000625;5.52e-14;11!CL:0000542;1.23e-10;53!CL:0002087;2.97e-10;104!CL:0000860;1.06e-08;33!CL:0002057;1.06e-08;33!CL:0000738;1.32e-08;136!CL:0000624;4.65e-08;6!CL:0000451;5.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.38e-37,136;CL:0002087,4.64e-29,115;CL:0000037,6.04e-29,168;CL:0002031,1.16e-26,120;CL:0000988,5.90e-26,177;CL:0002032,3.99e-25,161;CL:0000837,3.99e-25,161;CL:0000084,3.17e-23,25;CL:0000827,3.17e-23,25;CL:0000791,2.12e-21,18;CL:0000789,2.12e-21,18;CL:0002420,2.12e-21,18;CL:0002419,2.12e-21,18;CL:0000790,2.12e-21,18;CL:0000838,5.53e-19,52;CL:0000542,2.21e-18,53;CL:0000051,2.21e-18,53;CL:0000625,5.59e-14,11;CL:0000766,5.00e-13,72;CL:0002009,2.84e-10,61;CL:0000557,1.09e-09,67;CL:0002194,1.49e-09,59;CL:0000576,1.49e-09,59;CL:0000040,1.49e-09,59;CL:0000559,1.49e-09,59;CL:0000763,2.44e-09,108;CL:0000049,2.44e-09,108;CL:0000860,5.46e-09,42;CL:0002057,5.46e-09,42;CL:0000839,1.01e-08,66;CL:0000624,4.64e-08,6;CL:0000473,1.17e-07,48;CL:0000234,1.17e-07,48;CL:0000451,4.88e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-21;18!CL:0000051;1.23e-10;53!CL:0002057;3.07e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-34!115;UBERON:0002390!1.08e-16!102;UBERON:0003061!1.08e-16!102;UBERON:0002193!5.85e-15!112;UBERON:0002371!4.45e-08!80;UBERON:0000178!6.77e-08!15;UBERON:0000179!6.77e-08!15;UBERON:0000463!6.77e-08!15;UBERON:0002405!2.78e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-09;15!UBERON:0000179;1.08e-09;15!UBERON:0000463;1.08e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.60e-17,98;UBERON:0003061,6.60e-17,98;UBERON:0007023,1.08e-16,114;UBERON:0002193,1.47e-15,108;UBERON:0000178,1.09e-09,15;UBERON:0000179,1.09e-09,15;UBERON:0000463,1.09e-09,15;UBERON:0002405,1.68e-09,93;UBERON:0002371,2.08e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.314843125254717,95.5875192742837,310.901812458742,41.0262726787601,0,0,0,0.697204805222715,0.710846162437108,0.880801318004542,68.6954306579528,90.0444569140936,64.452228602608,10.7479427635164,57.0052852193404,18.2878653020272,3.48955773070955,2.26725566213286,0.970336244751265,1.85943229524548,2.05583944010913,0.929119112685311,2.58923153089935,3.84241059793651,1.89185783910868,3.10271112662957,3.87290810150296,0,1.69418105588344,1.63743690034707,1.79778787556068,4.28517449319264,5.45579346029359,3.19668562899521,2.30895910130701,2.99195486432448,0.852449501065388,2.03146467040009,3.40431134814684,3.73693349397345,3.26623264833766,3.12889751052121,1.3031330682307,3.02699751316684,8.10210799172642,0.949387162322653,0,0,0,0,0,0,0,0,0,0,3.82297027883492,0,1.70692089026603,2.00197993518006,0.574752439954483,1.32208974556972,0,3.98449078376614,3.52342313622563,1.91136614062614,1.32171328579026,62.776959053932,2.37045676297569,483.906034480029,384.364525968683,352.606570784158,614.577557056133,594.808136606302,623.057312346909,494.859890156095,846.162420042893,541.780263846226,686.755073209226,644.513195760737,496.99432053562,470.42466012408,433.787192344498,454.319429239935,749.720582796581,777.466450658683,700.689428766959,475.636633312644,631.359657510839,574.44751990928,573.514206510509,674.044459539956,599.221544343626,690.148461087804,574.073034846818,779.979116822863,863.269692236552,597.168872920213,652.084552129223,596.960053761601,560.869959651206,368.532589789673,349.461286569194,0,0,0,0,0,0,0,0,0,0,1.93236528524877,11.1987109550544,0,0,3.24547393654683,4.52737316978095,2.39324328933957,11.2090593423511,14.8718676802833,18.2014175651487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2629085333764,65.9226449052153,0,0,0,0,0,3.19201543978521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0.590789906681404,271.941269239425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,1.03664057770386,0.144119953416961,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,254.881617441281,419.872549990307,343.92598190093,306.611513672319,0,0,0,0,0,7.49007023947182,0,24.8649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,331.035609822743,148.842798564846,228.930611488388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,1.96021243057032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88664646389525,0,0,0,0,0,1.05553817648832,0,0,0,0,4.02181365321472,0,6.59006605437454,0,0,0,0,251.186566569924,214.098417999865,148.108268665282,263.484343656315,303.996719810698,243.825965008462,252.734712627438,172.108163255857,0,0,0,0.371606350251437,0,437.024343689308,393.145188549276,1.39705560002972,2.10655907145603,2.11673582723883,0.324621940274555,0.280797178113459,0,0,0,4.23229444504008,0,0,0,0,0,0,0,0,0.835218521685727,0,0,3.3307196799782,0,0,3.80921266106924,0,5.23783906104148,0,0.71623345421307,1.18785872333055,0,0,0.140669416410513,0,0,0,6.97367958878744,44.7579943160459,0,0,0.738508832766417,0,0,0,0,10.7521312144258,134.110531714286,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.591095237907095,1.97446857438575,0,0,6.30992119731136,0,0,0,0,2.55200927785536,0.0915975934018623,6.39641731222362,387.312600161841,0,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0,0,0,0,8.95735737970654,14.7724132720576,12.2206028986725,0,0,0,1.88723172345896,3.21031058919516,0.702793337176017,0.729819156862664,0,0,1.18375320854817,30.247679012166,0.30607276163049,10.2362258998151,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,8.53503345098091,0,0,0.137041924646751,0,0.50648636764703,0,0,10.6726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,1.39641200636127,0.687481272035051,1.43574604915363,0.199679000498991,3.004582336956,1.56220020209311,1.07493555978762,0,0,0,0,0,0,1.27009998098677,0,0.272406812223151,0,0,0,1.799791132412,1.5476039091159,0.364497339948148,0,7.40773648612463,1.41627387964495,0,0,0,4.2881719582402,0.662091970365432,0,0,0,0,0,0,0,0,3.51725360827398,0,0.258565912723101,1.05786081394152,0,0,25.522191603679,4.08731193259131,13.2556497711103,141.407316216406,4.54506753365272,1.21792598380896,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.625954653532499,1.72022758707021,1.10929051536852,2.29756690883119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,8.57385358893309,8.10475525911515,0.981392365535065,0,0,0,63.9959666735776,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,1.18812770967818,0,0,0,0,0,0,0,0,0.578063025868136,0,0.638535436228605,0.205116364240755,0,0.345786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| ||
|short_description=p1@CD3E | |||
}} | }} |
Latest revision as of 23:43, 15 September 2015
Short description: | p1@CD3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD3E_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000526146, ENST00000528435, ENST00000529713_5end |
EntrezGene: | CD3E |
HGNC: | 1674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.60e-17 | 98 |
blood island | 6.60e-17 | 98 |
adult organism | 1.08e-16 | 114 |
hemolymphoid system | 1.47e-15 | 108 |
blood | 1.09e-09 | 15 |
haemolymphatic fluid | 1.09e-09 | 15 |
organism substance | 1.09e-09 | 15 |
immune system | 1.68e-09 | 93 |
bone marrow | 2.08e-07 | 76 |