FFCP PHASE1:Hg19::chr2:102091590..102091601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=731220 | |EntrezGene=731220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37253 | |HGNC=37253 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZV50,E9PDA6 | |UniProt=Q6ZV50,E9PDA6 | ||
|association_with_transcript=-425bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |association_with_transcript=-425bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | ||
|cluster_id=chr2:102091590..102091601,- | |||
|coexpression_cluster_id=C4110 | |coexpression_cluster_id=C4110 | ||
|description=CAGE_peak_5_at_RFX8_5end | |description=CAGE_peak_5_at_RFX8_5end | ||
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|ontology_enrichment_celltype=CL:0000048!6.37e-33!430;CL:0000723!8.17e-32!436;CL:0000034!2.19e-30!444;CL:0000134!1.14e-24!358;CL:0002320!4.88e-24!365;CL:0000055!9.88e-22!180;CL:0000219!3.23e-21!390;CL:0000057!7.09e-21!75;CL:0002620!1.03e-17!23;CL:0002371!8.15e-17!591;CL:0000144!2.73e-13!625;CL:0000548!9.82e-10!679;CL:0000004!9.82e-10!679;CL:0000255!9.82e-10!679;CL:0000012!1.75e-09!682;CL:0002551!2.72e-08!6;CL:0002570!1.78e-07!8;CL:0000680!3.95e-07!57;CL:0000056!3.95e-07!57;CL:0000355!3.95e-07!57 | |ontology_enrichment_celltype=CL:0000048!6.37e-33!430;CL:0000723!8.17e-32!436;CL:0000034!2.19e-30!444;CL:0000134!1.14e-24!358;CL:0002320!4.88e-24!365;CL:0000055!9.88e-22!180;CL:0000219!3.23e-21!390;CL:0000057!7.09e-21!75;CL:0002620!1.03e-17!23;CL:0002371!8.15e-17!591;CL:0000144!2.73e-13!625;CL:0000548!9.82e-10!679;CL:0000004!9.82e-10!679;CL:0000255!9.82e-10!679;CL:0000012!1.75e-09!682;CL:0002551!2.72e-08!6;CL:0002570!1.78e-07!8;CL:0000680!3.95e-07!57;CL:0000056!3.95e-07!57;CL:0000355!3.95e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.99e-19;23!CL:0002551;1.71e-16;6!CL:0002570;2.46e-12;8!CL:0002583;1.88e-08;2!CL:0000057;2.17e-07;73!CL:0002573;9.80e-07;2 | |ontology_enrichment_celltype_v019=CL:0002620;7.99e-19;23!CL:0002551;1.71e-16;6!CL:0002570;2.46e-12;8!CL:0002583;1.88e-08;2!CL:0000057;2.17e-07;73!CL:0002573;9.80e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.99e-19,23;CL:0002551,1.20e-16,6;CL:0000057,1.99e-12,76;CL:0002570,2.76e-12,8;CL:0000048,4.68e-12,427;CL:0000723,9.54e-12,433;CL:0000034,2.39e-11,441;CL:0000134,1.11e-08,354;CL:0000219,1.37e-08,386;CL:0002583,1.97e-08,2;CL:0002320,2.42e-08,361;CL:0002573,9.70e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.76e-08!14 | |ontology_enrichment_disease=DOID:2394!2.76e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.65e-23!375;UBERON:0002204!5.23e-11!167;UBERON:0000914!1.78e-10!83;UBERON:0002329!1.78e-10!83;UBERON:0003077!1.78e-10!83;UBERON:0003059!1.78e-10!83;UBERON:0007282!1.78e-10!83;UBERON:0009618!1.78e-10!83;UBERON:0007285!1.78e-10!83;UBERON:0002199!7.70e-10!45;UBERON:0002416!7.70e-10!45;UBERON:0004290!8.42e-10!70;UBERON:0002097!1.90e-08!40;UBERON:0000486!1.68e-07!82;UBERON:0002067!6.82e-07!9;UBERON:0004016!6.82e-07!9;UBERON:0010083!6.82e-07!9 | |ontology_enrichment_uberon=UBERON:0002384!1.65e-23!375;UBERON:0002204!5.23e-11!167;UBERON:0000914!1.78e-10!83;UBERON:0002329!1.78e-10!83;UBERON:0003077!1.78e-10!83;UBERON:0003059!1.78e-10!83;UBERON:0007282!1.78e-10!83;UBERON:0009618!1.78e-10!83;UBERON:0007285!1.78e-10!83;UBERON:0002199!7.70e-10!45;UBERON:0002416!7.70e-10!45;UBERON:0004290!8.42e-10!70;UBERON:0002097!1.90e-08!40;UBERON:0000486!1.68e-07!82;UBERON:0002067!6.82e-07!9;UBERON:0004016!6.82e-07!9;UBERON:0010083!6.82e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.91e-15;9!UBERON:0002199;9.33e-10;46!UBERON:0002416;9.33e-10;46!UBERON:0001013;1.33e-09;14!UBERON:0002097;5.00e-09;41!UBERON:0003102;8.70e-09;50!UBERON:0002072;2.78e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002067;2.91e-15;9!UBERON:0002199;9.33e-10;46!UBERON:0002416;9.33e-10;46!UBERON:0001013;1.33e-09;14!UBERON:0002097;5.00e-09;41!UBERON:0003102;8.70e-09;50!UBERON:0002072;2.78e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.00e-16,46;UBERON:0002416,8.00e-16,46;UBERON:0002067,2.10e-15,9;UBERON:0004016,2.10e-15,9;UBERON:0010083,2.10e-15,9;UBERON:0002097,1.62e-11,41;UBERON:0003102,9.67e-10,99;UBERON:0001013,1.48e-09,14;UBERON:0002329,6.20e-09,71;UBERON:0003059,6.20e-09,71;UBERON:0007282,6.20e-09,71;UBERON:0004290,6.20e-09,71;UBERON:0009618,6.20e-09,71;UBERON:0003077,9.15e-09,72;UBERON:0007285,9.15e-09,72;UBERON:0007524,1.34e-08,73;UBERON:0002384,6.98e-08,371;UBERON:0007503,7.63e-08,78;UBERON:0002072,2.98e-07,5;UBERON:0000486,3.50e-07,83 | |||
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| ||
|short_description=p5@RFX8 | |short_description=p5@RFX8 | ||
}} | }} |
Latest revision as of 00:09, 16 September 2015
Short description: | p5@RFX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RFX8_5end |
Coexpression cluster: | C4110_schwannoma_Fibroblast_Hodgkin_Skeletal_biphenotypic_myxofibrosarcoma_Preadipocyte |
Association with transcript: | -425bp_to_ENST00000428343, ENST00000481179, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.99e-19 | 23 |
fibroblast of dermis | 1.20e-16 | 6 |
fibroblast | 1.99e-12 | 76 |
mesenchymal stem cell of adipose | 2.76e-12 | 8 |
multi fate stem cell | 4.68e-12 | 427 |
somatic stem cell | 9.54e-12 | 433 |
stem cell | 2.39e-11 | 441 |
mesenchymal cell | 1.11e-08 | 354 |
motile cell | 1.37e-08 | 386 |
subcutaneous preadipocyte | 1.97e-08 | 2 |
connective tissue cell | 2.42e-08 | 361 |
Schwann cell | 9.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
integument | 8.00e-16 | 46 |
integumental system | 8.00e-16 | 46 |
dermis | 2.10e-15 | 9 |
dermatome | 2.10e-15 | 9 |
future dermis | 2.10e-15 | 9 |
skin of body | 1.62e-11 | 41 |
surface structure | 9.67e-10 | 99 |
adipose tissue | 1.48e-09 | 14 |
somite | 6.20e-09 | 71 |
presomitic mesoderm | 6.20e-09 | 71 |
presumptive segmental plate | 6.20e-09 | 71 |
dermomyotome | 6.20e-09 | 71 |
trunk paraxial mesoderm | 6.20e-09 | 71 |
paraxial mesoderm | 9.15e-09 | 72 |
presumptive paraxial mesoderm | 9.15e-09 | 72 |
dense mesenchyme tissue | 1.34e-08 | 73 |
connective tissue | 6.98e-08 | 371 |
epithelial vesicle | 7.63e-08 | 78 |
hypodermis | 2.98e-07 | 5 |
multilaminar epithelium | 3.50e-07 | 83 |