FFCP PHASE1:Hg19::chr12:93966313..93966323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt=O14508 | |UniProt=O14508 | ||
|association_with_transcript=-142bp_to_AF020590,BC010399_5end | |association_with_transcript=-142bp_to_AF020590,BC010399_5end | ||
|cluster_id=chr12:93966313..93966323,+ | |||
|coexpression_cluster_id=C1693 | |||
|description=CAGE_peak_30_at_SOCS2_5end | |description=CAGE_peak_30_at_SOCS2_5end | ||
|id=chr12:93966313..93966323,+ | |id=chr12:93966313..93966323,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.46e-13!5;CL:0000457!1.46e-13!5;CL:0002191!1.46e-13!5;CL:0000097!1.46e-13!5;CL:0000831!1.46e-13!5;CL:0002028!1.46e-13!5;CL:0000764!1.82e-09!2;CL:0000765!1.82e-09!2;CL:0000050!1.82e-09!2;CL:0000038!1.82e-09!2;CL:0000558!1.82e-09!2;CL:0000547!1.82e-09!2;CL:0000549!1.82e-09!2;CL:0000550!1.82e-09!2;CL:0000552!1.82e-09!2;CL:0002322!1.16e-07!5;CL:0000163!1.51e-07!9 | |ontology_enrichment_celltype=CL:0002274!1.46e-13!5;CL:0000457!1.46e-13!5;CL:0002191!1.46e-13!5;CL:0000097!1.46e-13!5;CL:0000831!1.46e-13!5;CL:0002028!1.46e-13!5;CL:0000764!1.82e-09!2;CL:0000765!1.82e-09!2;CL:0000050!1.82e-09!2;CL:0000038!1.82e-09!2;CL:0000558!1.82e-09!2;CL:0000547!1.82e-09!2;CL:0000549!1.82e-09!2;CL:0000550!1.82e-09!2;CL:0000552!1.82e-09!2;CL:0002322!1.16e-07!5;CL:0000163!1.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.26e-11;5!CL:0000763;3.98e-07;100!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.94e-11,5;CL:0002028,2.94e-11,5;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!7.19e-19!8 | |ontology_enrichment_disease=DOID:1036!7.19e-19!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;5.52e-56;8!DOID:8692;6.15e-15;31!DOID:1240;9.98e-11;39!DOID:2531;2.80e-07;51!DOID:0060083;2.80e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.66e-56,8;DOID:8692,3.01e-15,31;DOID:1240,2.57e-12,39;DOID:2531,1.24e-09,51;DOID:0060083,1.24e-09,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p30@SOCS2 | |short_description=p30@SOCS2 | ||
}} | }} |
Latest revision as of 00:20, 16 September 2015
Short description: | p30@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SOCS2_5end |
Coexpression cluster: | C1693_Mast_leukemia_acute_chronic_Dendritic_mature_immature |
Association with transcript: | -142bp_to_AF020590, BC010399_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.94e-11 | 5 |
basophil mast progenitor cell | 2.94e-11 | 5 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.66e-56 | 8 |
myeloid leukemia | 3.01e-15 | 31 |
leukemia | 2.57e-12 | 39 |
hematologic cancer | 1.24e-09 | 51 |
immune system cancer | 1.24e-09 | 51 |