FFCP PHASE1:Hg19::chr9:132934700..132934718,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:132934700..132934718,+ to FFCP PHASE1:Hg19::chr9:132934700..132934718,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23413 | |EntrezGene=23413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3953 | |HGNC=3953 | ||
|TSSclassifier=strong | |||
|UniProt=P62166 | |UniProt=P62166 | ||
|association_with_transcript=-138bp_to_ENST00000372398,NM_014286,uc004bzi.2_5end | |||
|cluster_id=chr9:132934700..132934718,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NCS1_5end | |||
|id=chr9:132934700..132934718,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.53e-15!180;CL:0000220!2.81e-14!246;CL:0002321!9.09e-14!248;CL:0000222!5.31e-11!119;CL:0000183!1.34e-09!59;CL:0000680!3.61e-09!57;CL:0000056!3.61e-09!57;CL:0000355!3.61e-09!57;CL:0000187!1.48e-08!54;CL:0000393!1.52e-08!60;CL:0000211!1.52e-08!60;CL:0000192!3.30e-08!42;CL:0000514!3.30e-08!42;CL:0000221!2.86e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.53e-13,250;CL:0000222,8.58e-11,121;CL:0000680,9.49e-09,58;CL:0000056,9.49e-09,58;CL:0000355,9.49e-09,58;CL:0000187,3.95e-08,55;CL:0000393,6.99e-08,61;CL:0000211,6.99e-08,61;CL:0000192,7.50e-08,43;CL:0000514,7.50e-08,43;CL:0000221,3.41e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!6.80e-30!309;UBERON:0000119!1.32e-29!312;UBERON:0000475!2.80e-28!365;UBERON:0003075!1.11e-27!86;UBERON:0007284!1.11e-27!86;UBERON:0000073!8.56e-27!94;UBERON:0001016!8.56e-27!94;UBERON:0005743!6.76e-26!86;UBERON:0002346!1.18e-25!90;UBERON:0004121!1.46e-25!169;UBERON:0001049!3.23e-25!57;UBERON:0005068!3.23e-25!57;UBERON:0006241!3.23e-25!57;UBERON:0007135!3.23e-25!57;UBERON:0000033!1.63e-24!123;UBERON:0001017!1.84e-24!82;UBERON:0000924!2.11e-24!173;UBERON:0006601!2.11e-24!173;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002616!1.53e-22!59;UBERON:0000481!9.62e-22!347;UBERON:0003056!1.16e-21!61;UBERON:0000153!2.00e-21!129;UBERON:0007811!2.00e-21!129;UBERON:0002050!9.83e-21!605;UBERON:0005423!9.83e-21!605;UBERON:0000923!2.40e-20!604;UBERON:0005291!2.40e-20!604;UBERON:0006598!2.40e-20!604;UBERON:0002532!2.40e-20!604;UBERON:0000025!2.73e-20!194;UBERON:0001869!3.08e-20!32;UBERON:0002020!3.87e-20!34;UBERON:0003528!3.87e-20!34;UBERON:0000922!5.23e-20!612;UBERON:0001893!6.02e-20!34;UBERON:0004111!8.09e-20!241;UBERON:0002780!1.54e-19!41;UBERON:0001890!1.54e-19!41;UBERON:0006240!1.54e-19!41;UBERON:0002791!2.74e-19!33;UBERON:0000467!3.40e-19!625;UBERON:0000480!8.00e-19!626;UBERON:0000468!1.68e-18!659;UBERON:0003080!2.76e-18!42;UBERON:0000477!3.68e-17!286;UBERON:0000956!2.46e-16!25;UBERON:0000203!2.46e-16!25;UBERON:0000064!4.68e-16!219;UBERON:0002619!5.53e-16!22;UBERON:0001950!1.25e-14!20;UBERON:0000914!7.65e-10!83;UBERON:0002329!7.65e-10!83;UBERON:0003077!7.65e-10!83;UBERON:0003059!7.65e-10!83;UBERON:0007282!7.65e-10!83;UBERON:0009618!7.65e-10!83;UBERON:0007285!7.65e-10!83;UBERON:0005256!1.27e-09!143;UBERON:0000486!2.27e-09!82;UBERON:0000062!8.56e-09!511;UBERON:0004290!2.27e-08!70;UBERON:0002385!3.24e-08!63;UBERON:0001015!3.24e-08!63;UBERON:0000383!3.24e-08!63;UBERON:0003076!3.96e-08!15;UBERON:0003057!3.96e-08!15;UBERON:0001134!4.54e-08!61;UBERON:0002036!4.54e-08!61;UBERON:0003082!4.54e-08!61;UBERON:0002100!2.18e-07!216;UBERON:0002049!3.82e-07!79;UBERON:0007798!3.82e-07!79;UBERON:0001637!4.48e-07!42;UBERON:0003509!4.48e-07!42;UBERON:0004572!4.48e-07!42;UBERON:0004732!4.66e-07!13;UBERON:0004733!6.77e-07!12;UBERON:0002028!6.77e-07!12;UBERON:0007277!6.77e-07!12;UBERON:0007023!8.11e-07!115;UBERON:0001981!9.27e-07!60;UBERON:0007500!9.27e-07!60;UBERON:0004537!9.27e-07!60;UBERON:0006965!9.27e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.73e-19;32!UBERON:0003528;1.91e-18;34!UBERON:0002020;1.91e-18;34!UBERON:0001893;2.95e-18;34!UBERON:0002791;3.72e-18;32!UBERON:0000956;3.84e-17;25!UBERON:0000203;3.84e-17;25!UBERON:0002619;1.17e-16;22!UBERON:0001950;3.02e-15;20!UBERON:0002780;7.21e-15;41!UBERON:0001890;7.21e-15;41!UBERON:0000073;1.73e-14;53!UBERON:0002616;1.73e-14;53!UBERON:0000955;2.09e-11;68!UBERON:0001017;5.85e-11;75!UBERON:0001016;3.35e-10;83!UBERON:0004732;2.66e-07;13!UBERON:0004733;4.15e-07;12!UBERON:0002028;4.15e-07;12!UBERON:0010314;5.86e-07;132 | |||
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| ||
|short_description=p2@NCS1 | |||
}} | }} |
Latest revision as of 00:32, 16 September 2015
Short description: | p2@NCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCS1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -138bp_to_ENST00000372398, NM_014286, uc004bzi.2_5end |
EntrezGene: | NCS1 |
HGNC: | 3953 |
UniProt: | P62166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.53e-13 | 250 |
mesodermal cell | 8.58e-11 | 121 |
muscle precursor cell | 9.49e-09 | 58 |
myoblast | 9.49e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-09 | 58 |
muscle cell | 3.95e-08 | 55 |
electrically responsive cell | 6.99e-08 | 61 |
electrically active cell | 6.99e-08 | 61 |
smooth muscle cell | 7.50e-08 | 43 |
smooth muscle myoblast | 7.50e-08 | 43 |
ectodermal cell | 3.41e-07 | 72 |