FFCP PHASE1:Hg19::chr3:151034539..151034548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53836 | |EntrezGene=53836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4538 | |HGNC=4538 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY21 | |UniProt=Q9BY21 | ||
|association_with_transcript=87bp_to_NM_023915,uc003eyt.2_5end | |association_with_transcript=87bp_to_NM_023915,uc003eyt.2_5end | ||
|cluster_id=chr3:151034539..151034548,- | |||
|description=CAGE_peak_3_at_GPR87_5end | |description=CAGE_peak_3_at_GPR87_5end | ||
|id=chr3:151034539..151034548,- | |id=chr3:151034539..151034548,- | ||
|ontology_enrichment_celltype=CL:0000066!1.54e-29!254;CL:0002076!2.16e-23!43;CL:0000223!2.60e-16!59;CL:0002368!1.98e-13!13;CL:0002251!1.64e-12!21;CL:0000076!3.34e-12!62;CL:0000622!2.22e-11!5;CL:0002159!7.29e-11!13;CL:0000154!2.23e-09!6;CL:0000150!2.38e-08!9;CL:0002623!9.26e-08!3;CL:0002202!2.73e-07!9;CL:0002632!2.73e-07!9;CL:0002621!4.60e-07!3;CL:0002166!4.99e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.54e-29!254;CL:0002076!2.16e-23!43;CL:0000223!2.60e-16!59;CL:0002368!1.98e-13!13;CL:0002251!1.64e-12!21;CL:0000076!3.34e-12!62;CL:0000622!2.22e-11!5;CL:0002159!7.29e-11!13;CL:0000154!2.23e-09!6;CL:0000150!2.38e-08!9;CL:0002623!9.26e-08!3;CL:0002202!2.73e-07!9;CL:0002632!2.73e-07!9;CL:0002621!4.60e-07!3;CL:0002166!4.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002251;1.95e-28;20!CL:0000622;6.19e-20;5!CL:0002623;2.04e-19;3!CL:0002076;3.00e-19;42!CL:0000154;1.21e-16;6!CL:0000150;3.87e-11;9!CL:0002166;9.37e-09;3!CL:0002621;9.37e-09;3!CL:0002336;3.50e-07;1!CL:0002261;3.50e-07;1!CL:1001319;3.50e-07;1!CL:1000600;3.50e-07;1!CL:0002170;3.50e-07;1!CL:0002327;9.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.43e-28,20;CL:0002076,4.23e-25,42;CL:0000622,5.67e-20,5;CL:0002623,2.71e-19,3;CL:0000223,2.22e-17,58;CL:0000154,1.13e-16,6;CL:0000066,4.98e-13,253;CL:0000150,3.69e-11,9;CL:0002621,9.40e-09,3;CL:0002166,1.02e-08,3;CL:0000076,8.09e-08,63;CL:1001319,4.34e-07,1;CL:1000600,4.34e-07,1;CL:0002336,4.60e-07,1;CL:0002261,4.60e-07,1;CL:0002170,4.60e-07,1;CL:0002327,7.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.12e-13;2!UBERON:0010056;4.12e-13;2!CL:0000223;1.25e-08;58!UBERON:0009143;3.50e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!2.16e-23!14;DOID:305!1.08e-16!106;DOID:0050687!2.11e-10!143 | |ontology_enrichment_disease=DOID:1749!2.16e-23!14;DOID:305!1.08e-16!106;DOID:0050687!2.11e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.45e-26;14!DOID:3151;3.50e-07;1!DOID:3149;3.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.81e-27,14;DOID:3151,4.08e-07,1;DOID:3149,4.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.87e-29!72;UBERON:0000065!1.32e-20!53;UBERON:0004119!1.24e-18!169;UBERON:0000925!1.24e-18!169;UBERON:0006595!1.24e-18!169;UBERON:0000072!2.93e-17!46;UBERON:0000166!5.87e-17!21;UBERON:0000161!8.32e-15!35;UBERON:0001007!1.12e-13!155;UBERON:0001555!1.12e-13!155;UBERON:0007026!1.12e-13!155;UBERON:0000165!1.15e-13!28;UBERON:0000930!1.15e-13!28;UBERON:0001557!1.23e-13!19;UBERON:0008947!8.36e-13!38;UBERON:0003258!8.36e-13!38;UBERON:0000077!2.46e-12!130;UBERON:0001737!2.47e-11!9;UBERON:0001041!2.77e-11!98;UBERON:0003729!5.26e-11!5;UBERON:0004921!3.71e-10!129;UBERON:0004185!3.71e-10!129;UBERON:0003343!3.81e-09!4;UBERON:0004785!3.81e-09!4;UBERON:0000974!5.76e-09!10;UBERON:0001444!2.02e-08!48;UBERON:0000344!6.85e-08!12;UBERON:0000063!9.01e-08!97;UBERON:0007196!1.34e-07!14;UBERON:0001558!1.34e-07!14;UBERON:0003102!1.72e-07!95;UBERON:0001723!1.90e-07!3;UBERON:0001033!1.90e-07!3;UBERON:0010056!1.90e-07!3;UBERON:0001949!4.60e-07!3 | |ontology_enrichment_uberon=UBERON:0001004!4.87e-29!72;UBERON:0000065!1.32e-20!53;UBERON:0004119!1.24e-18!169;UBERON:0000925!1.24e-18!169;UBERON:0006595!1.24e-18!169;UBERON:0000072!2.93e-17!46;UBERON:0000166!5.87e-17!21;UBERON:0000161!8.32e-15!35;UBERON:0001007!1.12e-13!155;UBERON:0001555!1.12e-13!155;UBERON:0007026!1.12e-13!155;UBERON:0000165!1.15e-13!28;UBERON:0000930!1.15e-13!28;UBERON:0001557!1.23e-13!19;UBERON:0008947!8.36e-13!38;UBERON:0003258!8.36e-13!38;UBERON:0000077!2.46e-12!130;UBERON:0001737!2.47e-11!9;UBERON:0001041!2.77e-11!98;UBERON:0003729!5.26e-11!5;UBERON:0004921!3.71e-10!129;UBERON:0004185!3.71e-10!129;UBERON:0003343!3.81e-09!4;UBERON:0004785!3.81e-09!4;UBERON:0000974!5.76e-09!10;UBERON:0001444!2.02e-08!48;UBERON:0000344!6.85e-08!12;UBERON:0000063!9.01e-08!97;UBERON:0007196!1.34e-07!14;UBERON:0001558!1.34e-07!14;UBERON:0003102!1.72e-07!95;UBERON:0001723!1.90e-07!3;UBERON:0001033!1.90e-07!3;UBERON:0010056!1.90e-07!3;UBERON:0001949!4.60e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.00e-24;28!UBERON:0000161;2.16e-19;19!UBERON:0000166;2.16e-19;19!UBERON:0001723;1.42e-18;3!UBERON:0001033;1.42e-18;3!UBERON:0003729;4.19e-16;13!UBERON:0003343;1.84e-14;4!UBERON:0004785;1.84e-14;4!UBERON:0000344;8.70e-14;20!UBERON:0001044;5.87e-10;6!UBERON:0003293;5.87e-10;6!UBERON:0003294;5.87e-10;6!UBERON:0010047;5.87e-10;6!UBERON:0003408;5.87e-10;6!UBERON:0000167;5.87e-10;6!UBERON:0000974;8.39e-10;6!UBERON:0001949;9.37e-09;3!UBERON:0001555;2.54e-08;54!UBERON:0000486;5.59e-08;12!UBERON:0001004;6.66e-08;65!UBERON:0000033;7.86e-08;50!UBERON:0007811;1.69e-07;52!UBERON:0001444;2.60e-07;48!UBERON:0001041;3.48e-07;14!UBERON:0000997;3.50e-07;1!UBERON:0004645;3.50e-07;1!UBERON:0005056;3.50e-07;1!UBERON:0004176;3.50e-07;1!UBERON:0001256;3.50e-07;1!UBERON:0001259;3.50e-07;1!UBERON:0003350;4.04e-07;8!UBERON:0001911;9.08e-07;4!UBERON:0001708;9.08e-07;4!UBERON:0008895;9.08e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.16e-25,22;UBERON:0000165,5.52e-23,29;UBERON:0000930,5.52e-23,29;UBERON:0000161,1.23e-21,36;UBERON:0001723,2.11e-18,3;UBERON:0001033,2.11e-18,3;UBERON:0010056,2.11e-18,3;UBERON:0003729,3.50e-16,13;UBERON:0000033,2.14e-15,56;UBERON:0003343,1.10e-14,4;UBERON:0004785,1.10e-14,4;UBERON:0000344,8.16e-14,20;UBERON:0003102,9.67e-14,99;UBERON:0000153,1.18e-13,62;UBERON:0007811,1.18e-13,62;UBERON:0001004,6.10e-13,74;UBERON:0001444,9.32e-13,49;UBERON:0004119,1.68e-10,160;UBERON:0000925,1.68e-10,160;UBERON:0006595,1.68e-10,160;UBERON:0001044,6.74e-10,6;UBERON:0003293,6.74e-10,6;UBERON:0003294,6.74e-10,6;UBERON:0010047,6.74e-10,6;UBERON:0000167,6.74e-10,6;UBERON:0001007,2.59e-09,145;UBERON:0001555,2.59e-09,145;UBERON:0007026,2.59e-09,145;UBERON:0006562,7.44e-09,11;UBERON:0001949,9.40e-09,3;UBERON:0008814,5.40e-08,18;UBERON:0004645,4.34e-07,1;UBERON:0001256,4.34e-07,1;UBERON:0001259,4.34e-07,1;UBERON:0003350,4.37e-07,8;UBERON:0000997,4.89e-07,1;UBERON:0005056,4.89e-07,1;UBERON:0001911,7.64e-07,4;UBERON:0005333,7.64e-07,4;UBERON:0008425,7.64e-07,4;UBERON:0005311,7.64e-07,4;UBERON:0001708,9.65e-07,4;UBERON:0008895,9.65e-07,4 | |||
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| ||
|short_description=p3@GPR87 | |short_description=p3@GPR87 | ||
}} | }} |
Latest revision as of 00:51, 16 September 2015
Short description: | p3@GPR87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR87_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_NM_023915, uc003eyt.2_5end |
EntrezGene: | GPR87 |
HGNC: | 4538 |
UniProt: | Q9BY21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.43e-28 | 20 |
endo-epithelial cell | 4.23e-25 | 42 |
acinar cell | 5.67e-20 | 5 |
acinar cell of salivary gland | 2.71e-19 | 3 |
endodermal cell | 2.22e-17 | 58 |
protein secreting cell | 1.13e-16 | 6 |
epithelial cell | 4.98e-13 | 253 |
glandular epithelial cell | 3.69e-11 | 9 |
gingival epithelial cell | 9.40e-09 | 3 |
epithelial cell of Malassez | 1.02e-08 | 3 |
squamous epithelial cell | 8.09e-08 | 63 |
bladder cell | 4.34e-07 | 1 |
lower urinary tract cell | 4.34e-07 | 1 |
buccal mucosa cell | 4.60e-07 | 1 |
endothelial cell of viscerocranial mucosa | 4.60e-07 | 1 |
keratinized cell of the oral mucosa | 4.60e-07 | 1 |
mammary gland epithelial cell | 7.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.81e-27 | 14 |
skin squamous cell carcinoma | 4.08e-07 | 1 |
keratoacanthoma | 4.08e-07 | 1 |