FFCP PHASE1:Hg19::chr6:148761434..148761452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23328 | |EntrezGene=23328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19182 | |HGNC=19182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000470750_5end | |association_with_transcript=-41bp_to_ENST00000470750_5end | ||
|cluster_id=chr6:148761434..148761452,+ | |||
|description=CAGE_peak_11_at_SASH1_5end | |description=CAGE_peak_11_at_SASH1_5end | ||
|id=chr6:148761434..148761452,+ | |id=chr6:148761434..148761452,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.18e-25!23;CL:0000057!1.44e-22!75;CL:0002556!2.09e-10!6;CL:0000055!2.30e-10!180;CL:0002552!1.87e-09!5;CL:0002551!1.84e-08!6 | |ontology_enrichment_celltype=CL:0002620!2.18e-25!23;CL:0000057!1.44e-22!75;CL:0002556!2.09e-10!6;CL:0000055!2.30e-10!180;CL:0002552!1.87e-09!5;CL:0002551!1.84e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.74e-21;23!CL:0002556;6.44e-20;6!CL:0002552;7.04e-18;5!CL:0000057;1.11e-11;73!CL:0000135;3.42e-10;3!CL:0000388;3.42e-10;3!CL:0000153;6.72e-09;9!CL:0000447;6.72e-09;9!CL:0002561;7.12e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.76e-25,76;CL:0002620,1.21e-21,23;CL:0002556,6.50e-20,6;CL:0002552,6.19e-18,5;CL:0000135,2.74e-10,3;CL:0000388,2.74e-10,3;CL:0000153,7.34e-09,9;CL:0000447,7.34e-09,9;CL:0002561,7.77e-08,2;CL:0000134,5.80e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.59e-09!5;DOID:450!7.59e-09!5;DOID:66!7.59e-09!5;DOID:423!7.59e-09!5;DOID:0080000!7.59e-09!5;DOID:11722!7.59e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.47e-17;5!DOID:450;8.47e-17;5!DOID:66;8.47e-17;5!DOID:423;8.47e-17;5!DOID:0080000;8.47e-17;5!DOID:11722;8.47e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.13e-16,5;DOID:450,1.13e-16,5;DOID:66,1.13e-16,5;DOID:423,1.13e-16,5;DOID:0080000,1.13e-16,5;DOID:11722,1.13e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.26e-19!95;UBERON:0002097!5.98e-18!40;UBERON:0002199!4.56e-15!45;UBERON:0002416!4.56e-15!45;UBERON:0001758!2.09e-10!6;UBERON:0003672!2.09e-10!6;UBERON:0001950!2.17e-10!20;UBERON:0000475!1.03e-09!365;UBERON:0002619!3.64e-09!22;UBERON:0000075!4.36e-09!13;UBERON:0005944!4.36e-09!13;UBERON:0004288!4.36e-09!13;UBERON:0003089!4.36e-09!13;UBERON:0000165!2.87e-08!28;UBERON:0000930!2.87e-08!28;UBERON:0000200!2.91e-08!6;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0001893!2.16e-07!34;UBERON:0002067!2.86e-07!9;UBERON:0004016!2.86e-07!9;UBERON:0010083!2.86e-07!9;UBERON:0001869!3.87e-07!32;UBERON:0003129!4.88e-07!11;UBERON:0002791!8.04e-07!33 | |ontology_enrichment_uberon=UBERON:0003102!3.26e-19!95;UBERON:0002097!5.98e-18!40;UBERON:0002199!4.56e-15!45;UBERON:0002416!4.56e-15!45;UBERON:0001758!2.09e-10!6;UBERON:0003672!2.09e-10!6;UBERON:0001950!2.17e-10!20;UBERON:0000475!1.03e-09!365;UBERON:0002619!3.64e-09!22;UBERON:0000075!4.36e-09!13;UBERON:0005944!4.36e-09!13;UBERON:0004288!4.36e-09!13;UBERON:0003089!4.36e-09!13;UBERON:0000165!2.87e-08!28;UBERON:0000930!2.87e-08!28;UBERON:0000200!2.91e-08!6;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0001893!2.16e-07!34;UBERON:0002067!2.86e-07!9;UBERON:0004016!2.86e-07!9;UBERON:0010083!2.86e-07!9;UBERON:0001869!3.87e-07!32;UBERON:0003129!4.88e-07!11;UBERON:0002791!8.04e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;6.44e-20;6!UBERON:0003672;6.44e-20;6!UBERON:0003129;5.70e-17;7!UBERON:0002097;3.96e-15;41!UBERON:0011137;2.28e-14;11!UBERON:0010323;2.28e-14;11!UBERON:0000165;1.26e-12;28!UBERON:0002199;5.66e-12;46!UBERON:0002416;5.66e-12;46!UBERON:0001434;2.88e-11;36!UBERON:0001828;5.07e-11;8!UBERON:0007846;3.42e-10;3!UBERON:0000043;3.42e-10;3!UBERON:0007845;3.42e-10;3!UBERON:0000075;1.56e-09;16!UBERON:0003102;4.94e-09;50!UBERON:0005933;7.12e-08;2!UBERON:0005942;7.12e-08;2!UBERON:0005932;7.12e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.62e-21,99;UBERON:0001758,6.50e-20,6;UBERON:0003672,6.50e-20,6;UBERON:0002097,4.68e-19,41;UBERON:0003129,5.74e-17,7;UBERON:0002199,1.62e-16,46;UBERON:0002416,1.62e-16,46;UBERON:0000165,1.30e-14,29;UBERON:0000930,1.30e-14,29;UBERON:0010323,2.31e-14,11;UBERON:0001828,4.69e-11,8;UBERON:0011137,4.78e-11,14;UBERON:0007846,2.74e-10,3;UBERON:0000043,2.74e-10,3;UBERON:0007845,2.74e-10,3;UBERON:0000075,1.58e-09,16;UBERON:0001444,7.33e-09,49;UBERON:0005933,7.77e-08,2;UBERON:0005942,7.77e-08,2;UBERON:0005932,7.77e-08,2;UBERON:0000153,1.74e-07,62;UBERON:0007811,1.74e-07,62;UBERON:0000033,2.15e-07,56 | |||
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| ||
|short_description=p11@SASH1 | |short_description=p11@SASH1 | ||
}} | }} |
Latest revision as of 01:01, 16 September 2015
Short description: | p11@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000470750_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.76e-25 | 76 |
skin fibroblast | 1.21e-21 | 23 |
fibroblast of periodontium | 6.50e-20 | 6 |
fibroblast of gingiva | 6.19e-18 | 5 |
fibrocyte | 2.74e-10 | 3 |
tendon cell | 2.74e-10 | 3 |
GAG secreting cell | 7.34e-09 | 9 |
carbohydrate secreting cell | 7.34e-09 | 9 |
outer root sheath cell | 7.77e-08 | 2 |
mesenchymal cell | 5.80e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.62e-21 | 99 |
periodontium | 6.50e-20 | 6 |
dentition | 6.50e-20 | 6 |
skin of body | 4.68e-19 | 41 |
skull | 5.74e-17 | 7 |
integument | 1.62e-16 | 46 |
integumental system | 1.62e-16 | 46 |
mouth | 1.30e-14 | 29 |
stomodeum | 1.30e-14 | 29 |
cranial skeletal system | 2.31e-14 | 11 |
gingiva | 4.69e-11 | 8 |
axial skeletal system | 4.78e-11 | 14 |
dense regular connective tissue | 2.74e-10 | 3 |
tendon | 2.74e-10 | 3 |
regular connective tissue | 2.74e-10 | 3 |
subdivision of skeletal system | 1.58e-09 | 16 |
subdivision of head | 7.33e-09 | 49 |
hair root sheath | 7.77e-08 | 2 |
hair outer root sheath | 7.77e-08 | 2 |
bulb of hair follicle | 7.77e-08 | 2 |
anterior region of body | 1.74e-07 | 62 |
craniocervical region | 1.74e-07 | 62 |
head | 2.15e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.13e-16 | 5 |
myotonic disease | 1.13e-16 | 5 |
muscle tissue disease | 1.13e-16 | 5 |
myopathy | 1.13e-16 | 5 |
muscular disease | 1.13e-16 | 5 |
myotonic dystrophy | 1.13e-16 | 5 |