FFCP PHASE1:Hg19::chr8:126011575..126011583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHX0 | |UniProt=B4DHX0 | ||
|association_with_transcript=-17bp_to_ENST00000541193_5end | |association_with_transcript=-17bp_to_ENST00000541193_5end | ||
|cluster_id=chr8:126011575..126011583,+ | |||
|description=CAGE_peak_3_at_SQLE_5end | |description=CAGE_peak_3_at_SQLE_5end | ||
|id=chr8:126011575..126011583,+ | |id=chr8:126011575..126011583,+ | ||
|ontology_enrichment_celltype=CL:0000548!9.13e-08!679;CL:0000004!9.13e-08!679;CL:0000255!9.13e-08!679;CL:0000012!2.89e-07!682 | |ontology_enrichment_celltype=CL:0000548!9.13e-08!679;CL:0000004!9.13e-08!679;CL:0000255!9.13e-08!679;CL:0000012!2.89e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.61e-07;3!CL:0000067;1.61e-07;3!CL:0005012;1.61e-07;3!CL:0002304;1.61e-07;3!CL:0002504;5.54e-07;3!CL:1000279;5.54e-07;3!CL:1000280;5.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.75e-07,3;CL:1000279,2.75e-07,3;CL:1000280,2.75e-07,3;CL:0000064,4.18e-07,3;CL:0000067,4.18e-07,3;CL:0005012,4.18e-07,3;CL:0002304,4.18e-07,3;CL:0000453,5.36e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.29e-07,3;DOID:127,7.29e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.61e-07;3!UBERON:0001775;1.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.18e-07,3;UBERON:0001775,4.18e-07,3 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.85870796139317,1.50561867580173,1.25542639594803,0.458480434487708,0.328402357799783,0.393553906568396,0,0,0,0,1.204823675113,0,0.0774672005803016,0.710846162437108,0,0,0.200544447470142,0,0,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0.464858073811369,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0.973269740605272,1.03988298880475,3.54767035940102,2.0202000709419,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,0.993943903390637,0.633152558322899,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0.98667019366864,0.311211035399766,0.269421344139376,0.817309515567294,0.302714855289863,0.576175924479999,0,0.936480230490962,0,1.04614076386261,0.822041490506354,1.29498355494505,0.98315564691574,1.02077085627447,1.47401180774122,0.929932030581889,0,0,0,0,1.0100166837244,2.00189631795143,0,0.438977620880838,0.612975591598039,0.300476117813194,0.453728732640084,0,0.213557388818567,0,1.20036438433761,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0.57978255948989,0.545492241181669,0,0.121973706129595,0.530119073285941,0.464775771478074,0.207322110030741,0.756962552626885,1.09493207722749,3.12899064659632,0,0,0,2.88751792667834,1.30137480043828,0.842923450390509,1.20505514941741,1.32352767278873,0.435758888184812,0.474541238222193,1.61797569792197,0.392442930250692,0.769494313892781,0.738155454624648,1.40241773803446,1.2347220339942,0,1.26755034821831,0,0.590789906681404,0.882926198829301,0.491953754172454,0.343135620597051,0.658501712451753,0,1.70899253099772,0.462942225792648,0,0,1.44331342025273,0.34779121492523,0,0.433099343283221,0,0.380508304469197,1.58040879591855,0.858486162094873,0.246217006087397,0,0.594524649154913,0,1.17587489739202,0.425325291727159,0.268675568108545,0.581267877027924,1.15014803749563,0.985326475791887,0.176096868026452,0.207328115540772,0,0,0.253991577168676,0,1.17217447210047,1.71072446022705,0.514137463516618,0.600686115687835,1.14330573052231,0,0.43596006883328,0.5867062865676,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0.532844358032199,0.428933980974443,0,0,0,0.355391948742546,1.58390374586686,1.50719688529793,0.871533458600294,0.899756920638513,0,0,2.10833939483032,0.958499421966331,0,0,0.434343920002738,1.43833425785268,0,0,0,0.215627574859517,0,0.508189248444927,0,0,0.167516265334349,4.46557126157214,0,0,0,0.12269149171914,0,0.542530047399471,0.831883446123229,3.56857977594324,0.630809660135739,0.234282829985426,0,0,0,0,0,0.347534457872331,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.604780586659361,0.496215615637554,0.153461973288062,0.561320188866147,0.512556597022804,0,0.160853921143607,0,0.771048469013278,0.355123450626254,0,0,0.116210378459959,0.846016147141356,2.20557117333613,0.368323955743585,0.34444334449382,1.45672934405374,1.31124414959424,0,1.23224539367064,0,0,0.633309773357254,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.512900250232778,0.328014645699706,0.976135183992909,0.206082023295445,1.28197250745681,0.82509499920588,0,2.60024098414608,0,0,0.924291702687866,1.5350367472613,1.37836572484531,0.859361958946189,2.46528379654188,1.44885266607372,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.38126038784765,0.255897791311334,0.855877976067841,0,0,1.61885211824983,2.47083326762449,1.29593642580255,0,0,0.421258456238981,0,0,0,0,1.27264888758341,0,0,0,0.438450885253763,0,0.655894752046633,0,0.92947049429925,0.281695602532241,0.430234056612155,0.392996164052485,0,1.06428319221179,0.211107635297664,0,0.379473173765715,0,0.192444225451024,1.34060455107157,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0.245040215981032,0.743212700502875,0,0.355709216742071,0.159426272728822,0.59873811429845,0.383010740264733,1.05836791361941,0.3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| ||
|short_description=p3@SQLE | |short_description=p3@SQLE | ||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p3@SQLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SQLE_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000541193_5end |
EntrezGene: | SQLE |
HGNC: | 11279 |
UniProt: | B4DHX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.75e-07 | 3 |
smooth muscle cell of large intestine | 2.75e-07 | 3 |
smooth muscle cell of colon | 2.75e-07 | 3 |
ciliated cell | 4.18e-07 | 3 |
ciliated epithelial cell | 4.18e-07 | 3 |
multi-ciliated epithelial cell | 4.18e-07 | 3 |
non-pigmented ciliary epithelial cell | 4.18e-07 | 3 |
Langerhans cell | 5.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.18e-07 | 3 |
ciliary body | 4.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.29e-07 | 3 |
leiomyoma | 7.29e-07 | 3 |