FFCP PHASE1:Hg19::chr1:111770265..111770275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt=Q15782,A6NNY3 | |UniProt=Q15782,A6NNY3 | ||
|association_with_transcript=-5bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end | |association_with_transcript=-5bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end | ||
|cluster_id=chr1:111770265..111770275,+ | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_10_at_CHI3L2_5end | |description=CAGE_peak_10_at_CHI3L2_5end | ||
|id=chr1:111770265..111770275,+ | |id=chr1:111770265..111770275,+ | ||
|ontology_enrichment_celltype=CL:0000153!9.08e-09!9;CL:0000447!9.08e-09!9;CL:0000667!1.59e-07!6;CL:0000058!1.59e-07!6;CL:0000138!1.59e-07!6;CL:0000136!3.34e-07!15 | |ontology_enrichment_celltype=CL:0000153!9.08e-09!9;CL:0000447!9.08e-09!9;CL:0000667!1.59e-07!6;CL:0000058!1.59e-07!6;CL:0000138!1.59e-07!6;CL:0000136!3.34e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.26e-28;6!CL:0002521;1.65e-20;3!CL:0000153;8.96e-19;9!CL:0000447;8.96e-19;9!CL:0000136;7.05e-18;13!CL:0002602;2.28e-14;2!CL:0000327;3.41e-11;15!CL:0002540;1.18e-10;6!CL:0002564;5.01e-10;3!CL:0002615;1.12e-09;3!CL:0000499;2.81e-08;28!CL:0002591;7.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.87e-28,6;CL:0000138,3.87e-28,6;CL:0002521,5.81e-21,3;CL:0000153,1.00e-18,9;CL:0000447,1.00e-18,9;CL:0000136,1.60e-15,15;CL:0002602,1.57e-14,2;CL:0000327,3.65e-11,15;CL:0002540,1.14e-10,6;CL:0002564,7.18e-10,3;CL:0002615,1.66e-09,3;CL:0000499,2.89e-08,28;CL:0002591,9.94e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.35e-08;1!UBERON:0006298;7.09e-08;1!UBERON:0010115;7.09e-08;1!UBERON:0005425;7.09e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;2.35e-08;1!DOID:0050177;2.35e-08;1!DOID:0050427;2.35e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.52e-08,1;DOID:0050177,2.52e-08,1;DOID:0050427,2.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!5.67e-11!10;UBERON:0001044!3.14e-10!6;UBERON:0003293!3.14e-10!6;UBERON:0003294!3.14e-10!6;UBERON:0010047!3.14e-10!6;UBERON:0000167!3.14e-10!6;UBERON:0001049!4.80e-09!57;UBERON:0005068!4.80e-09!57;UBERON:0006241!4.80e-09!57;UBERON:0007135!4.80e-09!57;UBERON:0003075!8.36e-08!86;UBERON:0007284!8.36e-08!86;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0002616!1.33e-07!59;UBERON:0003080!2.11e-07!42;UBERON:0000153!3.36e-07!129;UBERON:0007811!3.36e-07!129;UBERON:0002346!4.08e-07!90;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!5.67e-11!10;UBERON:0001044!3.14e-10!6;UBERON:0003293!3.14e-10!6;UBERON:0003294!3.14e-10!6;UBERON:0010047!3.14e-10!6;UBERON:0000167!3.14e-10!6;UBERON:0001049!4.80e-09!57;UBERON:0005068!4.80e-09!57;UBERON:0006241!4.80e-09!57;UBERON:0007135!4.80e-09!57;UBERON:0003075!8.36e-08!86;UBERON:0007284!8.36e-08!86;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0002616!1.33e-07!59;UBERON:0003080!2.11e-07!42;UBERON:0000153!3.36e-07!129;UBERON:0007811!3.36e-07!129;UBERON:0002346!4.08e-07!90;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.68e-22;5!UBERON:0002216;8.68e-22;5!UBERON:0011134;8.68e-22;5!UBERON:0002209;8.68e-22;5!UBERON:0002213;8.68e-22;5!UBERON:0007844;8.68e-22;5!UBERON:0011138;8.68e-22;5!UBERON:0001130;8.68e-22;5!UBERON:0001066;8.68e-22;5!UBERON:0001468;8.68e-22;5!UBERON:0002190;1.65e-20;3!UBERON:0001044;1.51e-18;6!UBERON:0003293;1.51e-18;6!UBERON:0003294;1.51e-18;6!UBERON:0010047;1.51e-18;6!UBERON:0003408;1.51e-18;6!UBERON:0000167;1.51e-18;6!UBERON:0001829;1.57e-14;2!UBERON:0006444;2.28e-14;2!UBERON:0001995;2.28e-14;2!UBERON:0004715;2.28e-14;2!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0002072;1.54e-12;5!UBERON:0004765;7.50e-12;26!UBERON:0002242;5.01e-10;3!UBERON:0002418;7.01e-10;3!UBERON:0004755;7.01e-10;3!UBERON:0001831;2.35e-08;1!UBERON:0001567;2.35e-08;1!UBERON:0001041;5.02e-08;14!UBERON:0002363;7.09e-08;1!UBERON:0001736;7.09e-08;1!UBERON:0002135;7.09e-08;1!UBERON:0000941;7.09e-08;1!UBERON:0001785;7.09e-08;1!UBERON:0002464;7.09e-08;1!UBERON:0004904;7.09e-08;1!UBERON:0001021;7.09e-08;1!UBERON:0000075;6.60e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,9.96e-22,5;UBERON:0002216,9.96e-22,5;UBERON:0011134,9.96e-22,5;UBERON:0002209,9.96e-22,5;UBERON:0002213,9.96e-22,5;UBERON:0005856,9.96e-22,5;UBERON:0005866,9.96e-22,5;UBERON:0005863,9.96e-22,5;UBERON:0007844,9.96e-22,5;UBERON:0011138,9.96e-22,5;UBERON:0001130,9.96e-22,5;UBERON:0001066,9.96e-22,5;UBERON:0001468,9.96e-22,5;UBERON:0002190,5.81e-21,3;UBERON:0001044,1.70e-18,6;UBERON:0003293,1.70e-18,6;UBERON:0003294,1.70e-18,6;UBERON:0010047,1.70e-18,6;UBERON:0000167,1.70e-18,6;UBERON:0006444,1.57e-14,2;UBERON:0001995,1.57e-14,2;UBERON:0004715,1.57e-14,2;UBERON:0001829,1.68e-14,2;UBERON:0004905,1.16e-13,8;UBERON:0000982,1.16e-13,8;UBERON:0004770,1.16e-13,8;UBERON:0002072,8.33e-13,5;UBERON:0003408,3.64e-11,10;UBERON:0002418,5.49e-10,3;UBERON:0004755,5.49e-10,3;UBERON:0002242,7.18e-10,3;UBERON:0003068,7.18e-10,3;UBERON:0002328,7.18e-10,3;UBERON:0004880,7.18e-10,3;UBERON:0001831,2.35e-08,1;UBERON:0001567,2.35e-08,1;UBERON:0008801,2.35e-08,1;UBERON:0002363,5.05e-08,1;UBERON:0007645,5.05e-08,1;UBERON:0007647,5.05e-08,1;UBERON:0010115,5.05e-08,1;UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1;UBERON:0002135,7.10e-08,1;UBERON:0001736,7.59e-08,1;UBERON:0006298,7.59e-08,1;UBERON:0000075,6.87e-07,16 | |||
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|short_description=p10@CHI3L2 | |short_description=p10@CHI3L2 | ||
}} | }} |
Latest revision as of 02:58, 16 September 2015
Short description: | p10@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CHI3L2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -5bp_to_ENST00000369748, NM_001025197, NM_004000, uc001eam.2, uc001ean.2_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | Q15782A6NNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.87e-28 | 6 |
chondrocyte | 3.87e-28 | 6 |
subcutaneous fat cell | 5.81e-21 | 3 |
GAG secreting cell | 1.00e-18 | 9 |
carbohydrate secreting cell | 1.00e-18 | 9 |
fat cell | 1.60e-15 | 15 |
annulus pulposus cell | 1.57e-14 | 2 |
extracellular matrix secreting cell | 3.65e-11 | 15 |
mesenchymal stem cell of the bone marrow | 1.14e-10 | 6 |
nucleus pulposus cell of intervertebral disc | 7.18e-10 | 3 |
adipocyte of omentum tissue | 1.66e-09 | 3 |
stromal cell | 2.89e-08 | 28 |
smooth muscle cell of the pulmonary artery | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.52e-08 | 1 |
monogenic disease | 2.52e-08 | 1 |
xeroderma pigmentosum | 2.52e-08 | 1 |