FFCP PHASE1:Hg19::chr1:111772350..111772370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt=E9PII8 | |UniProt=E9PII8 | ||
|association_with_transcript=-4bp_to_ENST00000467038_5end | |association_with_transcript=-4bp_to_ENST00000467038_5end | ||
|cluster_id=chr1:111772350..111772370,+ | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_3_at_CHI3L2_5end | |description=CAGE_peak_3_at_CHI3L2_5end | ||
|id=chr1:111772350..111772370,+ | |id=chr1:111772350..111772370,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.44e-45!53;CL:0000051!1.44e-45!53;CL:0000838!2.14e-44!52;CL:0000791!2.68e-23!18;CL:0000789!2.68e-23!18;CL:0002420!2.68e-23!18;CL:0002419!2.68e-23!18;CL:0000790!2.68e-23!18;CL:0000945!3.39e-22!24;CL:0000826!3.39e-22!24;CL:0000084!6.82e-22!25;CL:0000827!6.82e-22!25;CL:0002087!2.83e-18!119;CL:0000738!1.21e-16!140;CL:0000625!1.57e-15!11;CL:0002031!2.21e-13!124;CL:0000037!2.93e-11!172;CL:0000566!2.93e-11!172;CL:0000236!5.21e-10!14;CL:0000988!7.68e-10!182;CL:0002032!1.23e-09!165;CL:0000837!1.23e-09!165;CL:0000624!6.18e-08!6 | |ontology_enrichment_celltype=CL:0000542!1.44e-45!53;CL:0000051!1.44e-45!53;CL:0000838!2.14e-44!52;CL:0000791!2.68e-23!18;CL:0000789!2.68e-23!18;CL:0002420!2.68e-23!18;CL:0002419!2.68e-23!18;CL:0000790!2.68e-23!18;CL:0000945!3.39e-22!24;CL:0000826!3.39e-22!24;CL:0000084!6.82e-22!25;CL:0000827!6.82e-22!25;CL:0002087!2.83e-18!119;CL:0000738!1.21e-16!140;CL:0000625!1.57e-15!11;CL:0002031!2.21e-13!124;CL:0000037!2.93e-11!172;CL:0000566!2.93e-11!172;CL:0000236!5.21e-10!14;CL:0000988!7.68e-10!182;CL:0002032!1.23e-09!165;CL:0000837!1.23e-09!165;CL:0000624!6.18e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.10e-24;53!CL:0000945;4.17e-23;24!CL:0000084;1.32e-20;25!CL:0000791;3.28e-18;18!CL:0000789;3.28e-18;18!CL:0002419;3.28e-18;18!CL:0000625;1.14e-16;11!CL:0000236;9.49e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.80e-43,52;CL:0000542,4.44e-42,53;CL:0000051,4.44e-42,53;CL:0000945,3.87e-23,24;CL:0000826,3.87e-23,24;CL:0000084,1.33e-20,25;CL:0000827,1.33e-20,25;CL:0000791,2.96e-18,18;CL:0000789,2.96e-18,18;CL:0002420,2.96e-18,18;CL:0002419,2.96e-18,18;CL:0000790,2.96e-18,18;CL:0000625,1.05e-16,11;CL:0002087,3.71e-16,115;CL:0002031,5.05e-14,120;CL:0000738,1.14e-13,136;CL:0000236,4.07e-13,14;CL:0000817,2.07e-10,3;CL:0000037,1.26e-09,168;CL:0000988,9.17e-09,177;CL:0002032,1.17e-08,161;CL:0000837,1.17e-08,161;CL:0000785,8.96e-08,2;CL:0000955,8.96e-08,2;CL:0000818,8.96e-08,2;CL:0000954,8.96e-08,2;CL:0000816,8.96e-08,2;CL:0000893,2.63e-07,2;CL:0002489,2.63e-07,2;CL:0000809,2.63e-07,2;CL:0000808,2.63e-07,2;CL:0000894,2.63e-07,2;CL:0000806,2.63e-07,2;CL:0000807,2.63e-07,2;CL:0000805,2.63e-07,2;CL:0002425,2.63e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.10e-24;53!CL:0000790;3.28e-18;18!CL:0000954;8.81e-08;2!UBERON:0004872;1.12e-07;7!CL:0002425;2.85e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.27e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.06e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.03e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.00e-12!7;UBERON:0000178!5.09e-10!15;UBERON:0000179!5.09e-10!15;UBERON:0000463!5.09e-10!15;UBERON:0002370!1.33e-07!4;UBERON:0005058!1.33e-07!4;UBERON:0009113!1.33e-07!4;UBERON:0003295!1.33e-07!4;UBERON:0005562!1.33e-07!4;UBERON:0009722!1.75e-07!11;UBERON:0007690!1.75e-07!11;UBERON:0001042!2.69e-07!10;UBERON:0009145!2.69e-07!10;UBERON:0003408!3.27e-07!10;UBERON:0003351!3.56e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.34e-17;5!UBERON:0005057;9.34e-17;5!UBERON:0002106;1.25e-10;3!UBERON:0002390;2.20e-09;32!UBERON:0000178;2.41e-08;15!UBERON:0000179;2.41e-08;15!UBERON:0000463;2.41e-08;15!UBERON:0002370;7.87e-08;2!UBERON:0005058;7.87e-08;2!UBERON:0009113;7.87e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.36e-22,7;UBERON:0005057,2.36e-22,7;UBERON:0002370,1.86e-13,4;UBERON:0005058,1.86e-13,4;UBERON:0009113,1.86e-13,4;UBERON:0003295,1.86e-13,4;UBERON:0005562,1.86e-13,4;UBERON:0003351,4.67e-13,6;UBERON:0001042,7.09e-11,10;UBERON:0009145,7.09e-11,10;UBERON:0002106,1.25e-10,3;UBERON:0004854,1.25e-10,3;UBERON:0009034,1.25e-10,3;UBERON:0002095,1.25e-10,3;UBERON:0004782,1.25e-10,3;UBERON:0003281,1.25e-10,3;UBERON:0009664,1.25e-10,3;UBERON:0002296,1.25e-10,3;UBERON:0005602,1.25e-10,3;UBERON:0001179,1.25e-10,3;UBERON:0006293,1.25e-10,3;UBERON:0003408,1.31e-10,10;UBERON:0006562,8.11e-10,11;UBERON:0000178,2.52e-08,15;UBERON:0000179,2.52e-08,15;UBERON:0000463,2.52e-08,15;UBERON:0009722,6.10e-07,11;UBERON:0007690,6.10e-07,11 | |||
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|short_description=p3@CHI3L2 | |short_description=p3@CHI3L2 | ||
}} | }} |
Latest revision as of 03:00, 16 September 2015
Short description: | p3@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHI3L2_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | -4bp_to_ENST00000467038_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | E9PII8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.36e-22 | 7 |
immune organ | 2.36e-22 | 7 |
thymus | 1.86e-13 | 4 |
hemolymphoid system gland | 1.86e-13 | 4 |
thymic region | 1.86e-13 | 4 |
pharyngeal gland | 1.86e-13 | 4 |
thymus primordium | 1.86e-13 | 4 |
pharyngeal epithelium | 4.67e-13 | 6 |
chordate pharynx | 7.09e-11 | 10 |
pharyngeal region of foregut | 7.09e-11 | 10 |
spleen | 1.25e-10 | 3 |
gastrointestinal system mesentery | 1.25e-10 | 3 |
stomach region | 1.25e-10 | 3 |
mesentery | 1.25e-10 | 3 |
gastrointestinal system serosa | 1.25e-10 | 3 |
mesentery of stomach | 1.25e-10 | 3 |
gut mesentery | 1.25e-10 | 3 |
dorsal mesentery | 1.25e-10 | 3 |
dorsal mesogastrium | 1.25e-10 | 3 |
peritoneal cavity | 1.25e-10 | 3 |
spleen primordium | 1.25e-10 | 3 |
gland of gut | 1.31e-10 | 10 |
pharynx | 8.11e-10 | 11 |
blood | 2.52e-08 | 15 |
haemolymphatic fluid | 2.52e-08 | 15 |
organism substance | 2.52e-08 | 15 |
entire pharyngeal arch endoderm | 6.10e-07 | 11 |
early pharyngeal endoderm | 6.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.03e-08 | 10 |