FFCP PHASE1:Hg19::chr3:154042235..154042290,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14410 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2U1,F5GZS0 | |||
|association_with_transcript=0bp_to_ENST00000308361,ENST00000496811,ENST00000544526,NM_001114397,NM_020865,uc003ezy.3,uc003ezz.3,uc010hvq.2_5end | |||
|cluster_id=chr3:154042235..154042290,- | |||
|description=CAGE_peak_1_at_DHX36_5end | |||
|id=chr3:154042235..154042290,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.72e-08;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.75e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.75e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.72e-23!115;UBERON:0000073!7.81e-14!94;UBERON:0001016!7.81e-14!94;UBERON:0001017!1.14e-12!82;UBERON:0005743!2.48e-12!86;UBERON:0001049!1.37e-11!57;UBERON:0005068!1.37e-11!57;UBERON:0006241!1.37e-11!57;UBERON:0007135!1.37e-11!57;UBERON:0002780!3.80e-11!41;UBERON:0001890!3.80e-11!41;UBERON:0006240!3.80e-11!41;UBERON:0003080!7.86e-11!42;UBERON:0000955!3.21e-10!69;UBERON:0006238!3.21e-10!69;UBERON:0002616!1.46e-09!59;UBERON:0000924!1.46e-09!173;UBERON:0006601!1.46e-09!173;UBERON:0004121!4.62e-09!169;UBERON:0002346!5.52e-09!90;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0002020!1.87e-08!34;UBERON:0003528!1.87e-08!34;UBERON:0001893!4.09e-08!34;UBERON:0001869!5.20e-08!32;UBERON:0002791!7.56e-08!33;UBERON:0000153!3.51e-07!129;UBERON:0007811!3.51e-07!129;UBERON:0000033!6.05e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.27e-08;41!UBERON:0001890;5.27e-08;41!UBERON:0003528;1.47e-07;34!UBERON:0002020;1.47e-07;34!UBERON:0001869;2.30e-07;32!UBERON:0001893;2.45e-07;34!UBERON:0007023;2.45e-07;114!UBERON:0002791;2.51e-07;32!UBERON:0000073;4.49e-07;53!UBERON:0002616;4.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-22,114;UBERON:0001016,2.20e-14,89;UBERON:0001017,7.09e-13,81;UBERON:0011216,7.42e-12,223;UBERON:0001049,7.55e-12,56;UBERON:0005068,7.55e-12,56;UBERON:0006241,7.55e-12,56;UBERON:0007135,7.55e-12,56;UBERON:0000073,3.30e-11,53;UBERON:0002616,3.30e-11,53;UBERON:0002780,3.80e-11,41;UBERON:0001890,3.80e-11,41;UBERON:0003080,3.80e-11,41;UBERON:0006240,3.80e-11,41;UBERON:0000955,2.05e-10,68;UBERON:0006238,2.05e-10,68;UBERON:0004121,6.93e-09,171;UBERON:0000924,6.93e-09,171;UBERON:0006601,6.93e-09,171;UBERON:0003528,1.87e-08,34;UBERON:0002020,1.87e-08,34;UBERON:0002346,3.01e-08,86;UBERON:0001893,4.09e-08,34;UBERON:0001869,5.20e-08,32;UBERON:0002791,6.83e-08,32;UBERON:0003075,9.83e-08,82;UBERON:0007284,9.83e-08,82 | |||
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| |||
|short_description=p1@DHX36 | |||
}} |
Latest revision as of 04:08, 16 September 2015
Short description: | p1@DHX36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DHX36_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308361, ENST00000496811, ENST00000544526, NM_001114397, NM_020865, uc003ezy.3, uc003ezz.3, uc010hvq.2_5end |
EntrezGene: | DHX36 |
HGNC: | 14410 |
UniProt: | Q9H2U1F5GZS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.77e-22 | 114 |
nervous system | 2.20e-14 | 89 |
central nervous system | 7.09e-13 | 81 |
organ system subdivision | 7.42e-12 | 223 |
neural tube | 7.55e-12 | 56 |
neural rod | 7.55e-12 | 56 |
future spinal cord | 7.55e-12 | 56 |
neural keel | 7.55e-12 | 56 |
regional part of nervous system | 3.30e-11 | 53 |
regional part of brain | 3.30e-11 | 53 |
regional part of forebrain | 3.80e-11 | 41 |
forebrain | 3.80e-11 | 41 |
anterior neural tube | 3.80e-11 | 41 |
future forebrain | 3.80e-11 | 41 |
brain | 2.05e-10 | 68 |
future brain | 2.05e-10 | 68 |
ectoderm-derived structure | 6.93e-09 | 171 |
ectoderm | 6.93e-09 | 171 |
presumptive ectoderm | 6.93e-09 | 171 |
brain grey matter | 1.87e-08 | 34 |
gray matter | 1.87e-08 | 34 |
neurectoderm | 3.01e-08 | 86 |
telencephalon | 4.09e-08 | 34 |
cerebral hemisphere | 5.20e-08 | 32 |
regional part of telencephalon | 6.83e-08 | 32 |
neural plate | 9.83e-08 | 82 |
presumptive neural plate | 9.83e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.75e-08 | 143 |