FFCP PHASE1:Hg19::chr2:106777086..106777105,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17729 | |||
|TSSclassifier=strong | |||
|UniProt=C9JCB7 | |||
|association_with_transcript=-5bp_to_ENST00000416298_5end | |||
|cluster_id=chr2:106777086..106777105,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_UXS1_5end | |||
|id=chr2:106777086..106777105,- | |||
|ontology_enrichment_celltype=CL:0000838!9.63e-31!52;CL:0000542!5.82e-30!53;CL:0000051!5.82e-30!53;CL:0000791!7.34e-29!18;CL:0000789!7.34e-29!18;CL:0002420!7.34e-29!18;CL:0002419!7.34e-29!18;CL:0000790!7.34e-29!18;CL:0000084!4.15e-24!25;CL:0000827!4.15e-24!25;CL:0000625!2.41e-20!11;CL:0000037!4.89e-17!172;CL:0000566!4.89e-17!172;CL:0000988!2.80e-15!182;CL:0002087!3.48e-15!119;CL:0000738!1.93e-14!140;CL:0002032!7.13e-14!165;CL:0000837!7.13e-14!165;CL:0000236!2.44e-13!14;CL:0000624!3.70e-12!6;CL:0002031!2.21e-11!124;CL:0000898!3.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.49e-46;18!CL:0000789;1.49e-46;18!CL:0002419;1.49e-46;18!CL:0000625;2.85e-32;11!CL:0000084;3.14e-32;25!CL:0000624;7.56e-19;6!CL:0000542;1.31e-18;53!CL:0000898;8.30e-11;3!CL:0000226;1.56e-09;3!CL:0000842;1.56e-09;3!CL:0000623;4.21e-09;3!CL:0000815;6.47e-08;2!CL:0000792;6.47e-08;2!CL:0002677;6.47e-08;2!CL:0000236;1.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.45e-46,18;CL:0000789,1.45e-46,18;CL:0002420,1.45e-46,18;CL:0002419,1.45e-46,18;CL:0000790,1.45e-46,18;CL:0000838,8.06e-33,52;CL:0000625,2.86e-32,11;CL:0000084,3.08e-32,25;CL:0000827,3.08e-32,25;CL:0000542,4.56e-32,53;CL:0000051,4.56e-32,53;CL:0000624,7.34e-19,6;CL:0002087,2.11e-14,115;CL:0000738,4.02e-12,136;CL:0000037,6.13e-11,168;CL:0000898,8.58e-11,3;CL:0002031,2.78e-10,120;CL:0000988,5.44e-10,177;CL:0000226,2.08e-09,3;CL:0000842,2.08e-09,3;CL:0000623,5.79e-09,3;CL:0000825,5.79e-09,3;CL:0002032,2.76e-08,161;CL:0000837,2.76e-08,161;CL:0000815,6.27e-08,2;CL:0000792,6.27e-08,2;CL:0002677,6.27e-08,2;CL:0000236,5.52e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.49e-46;18!CL:0000051;1.31e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.36e-16!15;UBERON:0000179!2.36e-16!15;UBERON:0000463!2.36e-16!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-26;15!UBERON:0000179;1.69e-26;15!UBERON:0000463;1.69e-26;15!UBERON:0002390;1.87e-12;32!UBERON:0002193;2.33e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.72e-26,15;UBERON:0000179,1.72e-26,15;UBERON:0000463,1.72e-26,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,1.77901850772711,1.28019066769952,0.800791974072025,0.574752439954483,3.30522436392431,0.954053754535364,1.1384259382189,0.587237189370939,0,0,1.68152568894461,2.89722493252585,4.32761494250433,2.75107533924415,4.93443597598822,43.134115810795,17.5998023982139,17.0441210064504,21.4309401248702,17.0457999034316,24.1576844129366,21.4887877746113,27.0803863765016,22.6721635914445,33.0350742802091,8.38633313478748,7.46145048021791,10.1431080007268,7.71090128442714,7.49114318651197,8.36284190439814,10.6510782135712,7.2811893784365,6.18529401868734,5.06039384039006,9.5569624297229,10.4173352617027,10.4549724889321,6.17357988218868,9.34302261427254,13.742379920758,7.81364931745256,4.10563998460523,1.61285394579786,1.60464117470104,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.07813787429759,1.02674429023799,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,3.01999881146064,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,5.35246044999663,2.84823593587081,6.19402616190251,2.87953591160336,3.8908398671563,3.24018862342869,3.96562588147135,0,0,0,0,14.8597289365738,0.853702120180969,0.956557636372934,2.59453182862662,0.383010740264733,0.423347165447766,0.649243880549111,1.40398589056729,0.684704037099577,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657887425858975,0.644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0.476128862927481,0.452122368852043,0.620747142958579,0,0,0.202117188958219,0,0,2.42467390852515,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p3@UXS1 | |||
}} |
Latest revision as of 05:11, 16 September 2015
Short description: | p3@UXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UXS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -5bp_to_ENST00000416298_5end |
EntrezGene: | UXS1 |
HGNC: | 17729 |
UniProt: | C9JCB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.45e-46 | 18 |
alpha-beta T cell | 1.45e-46 | 18 |
immature T cell | 1.45e-46 | 18 |
mature T cell | 1.45e-46 | 18 |
immature alpha-beta T cell | 1.45e-46 | 18 |
lymphoid lineage restricted progenitor cell | 8.06e-33 | 52 |
CD8-positive, alpha-beta T cell | 2.86e-32 | 11 |
T cell | 3.08e-32 | 25 |
pro-T cell | 3.08e-32 | 25 |
lymphocyte | 4.56e-32 | 53 |
common lymphoid progenitor | 4.56e-32 | 53 |
CD4-positive, alpha-beta T cell | 7.34e-19 | 6 |
nongranular leukocyte | 2.11e-14 | 115 |
leukocyte | 4.02e-12 | 136 |
hematopoietic stem cell | 6.13e-11 | 168 |
naive T cell | 8.58e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 2.78e-10 | 120 |
hematopoietic cell | 5.44e-10 | 177 |
single nucleate cell | 2.08e-09 | 3 |
mononuclear cell | 2.08e-09 | 3 |
natural killer cell | 5.79e-09 | 3 |
pro-NK cell | 5.79e-09 | 3 |
hematopoietic oligopotent progenitor cell | 2.76e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.76e-08 | 161 |
regulatory T cell | 6.27e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.27e-08 | 2 |
naive regulatory T cell | 6.27e-08 | 2 |
B cell | 5.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 1.72e-26 | 15 |
haemolymphatic fluid | 1.72e-26 | 15 |
organism substance | 1.72e-26 | 15 |