FFCP PHASE1:Hg19::chr7:129906632..129906654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1358 | |EntrezGene=1358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2297 | |HGNC=2297 | ||
|TSSclassifier=strong | |||
|UniProt=P48052 | |UniProt=P48052 | ||
|association_with_transcript=-12bp_to_ENST00000222481_5end | |association_with_transcript=-12bp_to_ENST00000222481_5end | ||
|cluster_id=chr7:129906632..129906654,+ | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_2_at_CPA2_5end | |description=CAGE_peak_2_at_CPA2_5end | ||
|id=chr7:129906632..129906654,+ | |id=chr7:129906632..129906654,+ | ||
|ontology_enrichment_celltype=CL:0000946!5.57e-11!1;CL:0000786!5.57e-11!1;CL:0000980!5.57e-11!1;CL:0002563!9.99e-11!4 | |ontology_enrichment_celltype=CL:0000946!5.57e-11!1;CL:0000786!5.57e-11!1;CL:0000980!5.57e-11!1;CL:0002563!9.99e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.91e-19;1!CL:0000786;3.91e-19;1!CL:0002563;4.70e-19;4!CL:0002253;2.27e-10;2!CL:0002231;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.91e-19,1;CL:0000786,3.91e-19,1;CL:0000980,3.91e-19,1;CL:0002563,4.70e-19,4;CL:0002253,2.27e-10,2;CL:0000785,2.99e-10,2;CL:0000955,2.99e-10,2;CL:0000818,2.99e-10,2;CL:0000954,2.99e-10,2;CL:0000816,2.99e-10,2;CL:0002231,2.79e-07,3;CL:0000817,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.99e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.43e-20!35;UBERON:0000160!2.19e-16!27;UBERON:0001242!9.99e-11!4;UBERON:0001262!9.99e-11!4;UBERON:0004786!9.99e-11!4;UBERON:0004808!9.99e-11!4;UBERON:0001277!9.99e-11!4;UBERON:0002108!1.00e-10!14;UBERON:0007190!1.61e-10!1;UBERON:0004921!2.16e-10!129;UBERON:0004185!2.16e-10!129;UBERON:0003350!9.36e-09!5;UBERON:0001007!2.64e-08!155;UBERON:0001555!2.64e-08!155;UBERON:0007026!2.64e-08!155;UBERON:0000060!9.20e-08!12;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169 | |ontology_enrichment_uberon=UBERON:0005409!1.43e-20!35;UBERON:0000160!2.19e-16!27;UBERON:0001242!9.99e-11!4;UBERON:0001262!9.99e-11!4;UBERON:0004786!9.99e-11!4;UBERON:0004808!9.99e-11!4;UBERON:0001277!9.99e-11!4;UBERON:0002108!1.00e-10!14;UBERON:0007190!1.61e-10!1;UBERON:0004921!2.16e-10!129;UBERON:0004185!2.16e-10!129;UBERON:0003350!9.36e-09!5;UBERON:0001007!2.64e-08!155;UBERON:0001555!2.64e-08!155;UBERON:0007026!2.64e-08!155;UBERON:0000060!9.20e-08!12;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.28e-38;22!UBERON:0000160;7.94e-36;17!UBERON:0002108;3.27e-33;4!UBERON:0004921;3.44e-23;33!UBERON:0001242;4.70e-19;4!UBERON:0001262;4.70e-19;4!UBERON:0004786;4.70e-19;4!UBERON:0004808;4.70e-19;4!UBERON:0001277;4.70e-19;4!UBERON:0000485;2.55e-11;7!UBERON:0003929;2.55e-11;7!UBERON:0001555;1.05e-10;54!UBERON:0003350;5.06e-10;8!UBERON:0001155;6.48e-09;9!UBERON:0000059;1.87e-07;11!UBERON:0002114;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-36,17;UBERON:0005409,1.70e-33,25;UBERON:0002108,3.10e-33,4;UBERON:0001242,4.70e-19,4;UBERON:0001262,4.70e-19,4;UBERON:0004786,4.70e-19,4;UBERON:0004808,4.70e-19,4;UBERON:0001277,4.70e-19,4;UBERON:0003350,5.06e-10,8;UBERON:0004921,3.28e-09,118;UBERON:0000485,5.20e-09,9;UBERON:0001155,6.36e-09,9;UBERON:0000059,1.84e-07,11;UBERON:0002114,1.93e-07,2;UBERON:0001007,2.11e-07,145;UBERON:0001555,2.11e-07,145;UBERON:0007026,2.11e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51276978592369,0,0,2.91909962861019,0,0,0,0,0,0,0,0,0,0,0,67.7548009872518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,374.345211380651,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3417856391176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7272079770043,4.80831033108706,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0,2.19100916473955,0,0,0,0,0,76.1798650342177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51276978592369,0,0,2.91909962861019,0,0,0,0,0,0,0,0,0,0,0,67.7548009872518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,374.345211380651,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3417856391176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7272079770043,4.80831033108706,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0,2.19100916473955,0,0,0,0,0,76.1798650342177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CPA2 | |short_description=p2@CPA2 | ||
}} | }} |
Latest revision as of 06:18, 16 September 2015
Short description: | p2@CPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPA2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | -12bp_to_ENST00000222481_5end |
EntrezGene: | CPA2 |
HGNC: | 2297 |
UniProt: | P48052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.91e-19 | 1 |
plasma cell | 3.91e-19 | 1 |
plasmablast | 3.91e-19 | 1 |
intestinal epithelial cell | 4.70e-19 | 4 |
epithelial cell of large intestine | 2.27e-10 | 2 |
mature B cell | 2.99e-10 | 2 |
pre-B-II cell | 2.99e-10 | 2 |
transitional stage B cell | 2.99e-10 | 2 |
small pre-B-II cell | 2.99e-10 | 2 |
immature B cell | 2.99e-10 | 2 |
epithelial cell of prostate | 2.79e-07 | 3 |
precursor B cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.47e-36 | 17 |
gastrointestinal system | 1.70e-33 | 25 |
small intestine | 3.10e-33 | 4 |
intestinal mucosa | 4.70e-19 | 4 |
wall of intestine | 4.70e-19 | 4 |
gastrointestinal system mucosa | 4.70e-19 | 4 |
gastrointestinal system epithelium | 4.70e-19 | 4 |
intestinal epithelium | 4.70e-19 | 4 |
epithelium of mucosa | 5.06e-10 | 8 |
subdivision of digestive tract | 3.28e-09 | 118 |
simple columnar epithelium | 5.20e-09 | 9 |
colon | 6.36e-09 | 9 |
large intestine | 1.84e-07 | 11 |
duodenum | 1.93e-07 | 2 |
digestive system | 2.11e-07 | 145 |
digestive tract | 2.11e-07 | 145 |
primitive gut | 2.11e-07 | 145 |