FFCP PHASE1:Hg19::chr7:129906687..129906712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1358 | |EntrezGene=1358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2297 | |HGNC=2297 | ||
|TSSclassifier=strong | |||
|UniProt=P48052 | |UniProt=P48052 | ||
|association_with_transcript=0bp_to_ENST00000480781,ENST00000487259,NM_001869,uc003vpq.2,uc011kpc.1_5end | |association_with_transcript=0bp_to_ENST00000480781,ENST00000487259,NM_001869,uc003vpq.2,uc011kpc.1_5end | ||
|cluster_id=chr7:129906687..129906712,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_CPA2_5end | |description=CAGE_peak_1_at_CPA2_5end | ||
|id=chr7:129906687..129906712,+ | |id=chr7:129906687..129906712,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000946;5.54e-10;1!CL:0000786;5.54e-10;1!CL:0002563;1.17e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.79e-10,1;CL:0000786,5.79e-10,1;CL:0000980,5.79e-10,1;CL:0002563,1.17e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.16e-10;1 | |||
|ontology_enrichment_disease=DOID:114!1.09e-11!2;DOID:178!9.15e-07!1;DOID:326!9.15e-07!1;DOID:3978!9.15e-07!1;DOID:3394!9.15e-07!1;DOID:5844!9.15e-07!1 | |ontology_enrichment_disease=DOID:114!1.09e-11!2;DOID:178!9.15e-07!1;DOID:326!9.15e-07!1;DOID:3978!9.15e-07!1;DOID:3394!9.15e-07!1;DOID:5844!9.15e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:114;3.45e-18;2!DOID:178;3.88e-10;1!DOID:326;3.88e-10;1!DOID:3978;3.88e-10;1!DOID:3394;3.88e-10;1!DOID:5844;3.88e-10;1!DOID:1287;1.46e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.90e-18,2;DOID:178,3.71e-10,1;DOID:326,3.71e-10,1;DOID:3978,3.71e-10,1;DOID:3394,3.71e-10,1;DOID:5844,3.71e-10,1;DOID:1287,1.34e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.00e-13!35;UBERON:0007023!4.10e-09!115;UBERON:0000160!1.16e-08!27;UBERON:0002106!1.46e-07!3;UBERON:0004854!1.46e-07!3;UBERON:0009034!1.46e-07!3;UBERON:0002095!1.46e-07!3;UBERON:0004782!1.46e-07!3;UBERON:0003281!1.46e-07!3;UBERON:0009664!1.46e-07!3;UBERON:0002296!1.46e-07!3;UBERON:0005602!1.46e-07!3;UBERON:0001179!1.46e-07!3;UBERON:0006293!1.46e-07!3;UBERON:0004177!4.32e-07!7;UBERON:0007029!6.96e-07!1 | |ontology_enrichment_uberon=UBERON:0005409!5.00e-13!35;UBERON:0007023!4.10e-09!115;UBERON:0000160!1.16e-08!27;UBERON:0002106!1.46e-07!3;UBERON:0004854!1.46e-07!3;UBERON:0009034!1.46e-07!3;UBERON:0002095!1.46e-07!3;UBERON:0004782!1.46e-07!3;UBERON:0003281!1.46e-07!3;UBERON:0009664!1.46e-07!3;UBERON:0002296!1.46e-07!3;UBERON:0005602!1.46e-07!3;UBERON:0001179!1.46e-07!3;UBERON:0006293!1.46e-07!3;UBERON:0004177!4.32e-07!7;UBERON:0007029!6.96e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.59e-18;22!UBERON:0000160;3.23e-17;17!UBERON:0002108;9.52e-17;4!UBERON:0004921;5.74e-11;33!UBERON:0007029;2.37e-10;1!UBERON:0001242;1.17e-09;4!UBERON:0001262;1.17e-09;4!UBERON:0004786;1.17e-09;4!UBERON:0004808;1.17e-09;4!UBERON:0001277;1.17e-09;4!UBERON:0000922;1.95e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.19e-17,17;UBERON:0002108,9.52e-17,4;UBERON:0005409,6.67e-16,25;UBERON:0007029,2.37e-10,1;UBERON:0001242,1.17e-09,4;UBERON:0001262,1.17e-09,4;UBERON:0004786,1.17e-09,4;UBERON:0004808,1.17e-09,4;UBERON:0001277,1.17e-09,4 | |||
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|short_description=p1@CPA2 | |short_description=p1@CPA2 | ||
}} | }} |
Latest revision as of 06:20, 16 September 2015
Short description: | p1@CPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPA2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000480781, ENST00000487259, NM_001869, uc003vpq.2, uc011kpc.1_5end |
EntrezGene: | CPA2 |
HGNC: | 2297 |
UniProt: | P48052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 5.79e-10 | 1 |
plasma cell | 5.79e-10 | 1 |
plasmablast | 5.79e-10 | 1 |
intestinal epithelial cell | 1.17e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.19e-17 | 17 |
small intestine | 9.52e-17 | 4 |
gastrointestinal system | 6.67e-16 | 25 |
surface | 2.37e-10 | 1 |
intestinal mucosa | 1.17e-09 | 4 |
wall of intestine | 1.17e-09 | 4 |
gastrointestinal system mucosa | 1.17e-09 | 4 |
gastrointestinal system epithelium | 1.17e-09 | 4 |
intestinal epithelium | 1.17e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.90e-18 | 2 |
vascular disease | 3.71e-10 | 1 |
ischemia | 3.71e-10 | 1 |
extrinsic cardiomyopathy | 3.71e-10 | 1 |
myocardial ischemia | 3.71e-10 | 1 |
myocardial infarction | 3.71e-10 | 1 |
cardiovascular system disease | 1.34e-09 | 4 |