FFCP PHASE1:Hg19::chr17:5389876..5389920,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24967 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=160bp_to_uc002gcd.2_5end | |||
|cluster_id=chr17:5389876..5389920,+ | |||
|description=CAGE_peak_1_at_MIS12_5end | |||
|id=chr17:5389876..5389920,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.09e-10!172;CL:0000566!3.09e-10!172;CL:0000838!3.53e-10!52;CL:0000542!7.11e-10!53;CL:0000051!7.11e-10!53;CL:0002032!1.57e-09!165;CL:0000837!1.57e-09!165;CL:0000988!2.09e-09!182;CL:0002031!1.43e-08!124;CL:0002087!1.53e-07!119;CL:0000945!6.39e-07!24;CL:0000826!6.39e-07!24;CL:0000738!7.19e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.02e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.50e-10,52;CL:0000542,7.05e-10,53;CL:0000051,7.05e-10,53;CL:0000037,1.99e-09,168;CL:0000988,6.82e-09,177;CL:0002032,9.65e-09,161;CL:0000837,9.65e-09,161;CL:0002031,8.95e-08,120;CL:0000945,6.36e-07,24;CL:0000826,6.36e-07,24;CL:0002087,8.74e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.04e-31!235;DOID:14566!1.84e-29!239;DOID:0050687!1.45e-20!143;DOID:305!1.63e-19!106;DOID:0050686!3.40e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.72e-31,235;DOID:14566,2.26e-29,239;DOID:0050687,1.62e-20,143;DOID:305,1.78e-19,106;DOID:0050686,3.37e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0001557!6.05e-07!19;UBERON:0001737!9.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.78e-07;9!UBERON:0001557;8.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,6.02e-07,19;UBERON:0001737,9.00e-07,9 | |||
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| |||
|short_description=p1@MIS12 | |||
}} |
Latest revision as of 07:32, 16 September 2015
Short description: | p1@MIS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIS12_5end |
Coexpression cluster: | NA |
Association with transcript: | 160bp_to_uc002gcd.2_5end |
EntrezGene: | MIS12 |
HGNC: | 24967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.50e-10 | 52 |
lymphocyte | 7.05e-10 | 53 |
common lymphoid progenitor | 7.05e-10 | 53 |
hematopoietic stem cell | 1.99e-09 | 168 |
hematopoietic cell | 6.82e-09 | 177 |
hematopoietic oligopotent progenitor cell | 9.65e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.65e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 8.95e-08 | 120 |
lymphocyte of B lineage | 6.36e-07 | 24 |
pro-B cell | 6.36e-07 | 24 |
nongranular leukocyte | 8.74e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 6.02e-07 | 19 |
larynx | 9.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.72e-31 | 235 |
disease of cellular proliferation | 2.26e-29 | 239 |
cell type cancer | 1.62e-20 | 143 |
carcinoma | 1.78e-19 | 106 |
organ system cancer | 3.37e-11 | 137 |