FFCP PHASE1:Hg19::chr14:80782230..80782250,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2884 | |HGNC=2884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000553594_5end | |association_with_transcript=-11bp_to_ENST00000553594_5end | ||
|cluster_id=chr14:80782230..80782250,- | |||
|description=CAGE_peak_7_at_DIO2_5end | |description=CAGE_peak_7_at_DIO2_5end | ||
|id=chr14:80782230..80782250,- | |id=chr14:80782230..80782250,- | ||
|ontology_enrichment_celltype=CL:0002620!2.19e-11!23;CL:0000064!5.31e-07!3;CL:0005012!5.31e-07!3;CL:0000067!5.31e-07!3;CL:0002304!5.31e-07!3;CL:0000359!6.62e-07!32 | |ontology_enrichment_celltype=CL:0002620!2.19e-11!23;CL:0000064!5.31e-07!3;CL:0005012!5.31e-07!3;CL:0000067!5.31e-07!3;CL:0002304!5.31e-07!3;CL:0000359!6.62e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.21e-21;3!CL:0000067;1.21e-21;3!CL:0005012;1.21e-21;3!CL:0002304;1.21e-21;3!CL:0002595;1.72e-13;5!CL:0002174;2.33e-08;1!CL:0000501;2.33e-08;1!CL:0000342;4.72e-08;1!CL:0002565;4.72e-08;1!CL:0000306;1.20e-07;4!CL:0002222;1.20e-07;4!CL:0002224;1.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.83e-22,3;CL:0000067,8.83e-22,3;CL:0005012,8.83e-22,3;CL:0002304,8.83e-22,3;CL:0002595,1.62e-13,5;CL:0002174,2.69e-08,1;CL:0000501,2.69e-08,1;CL:0000342,7.16e-08,1;CL:0002565,7.16e-08,1;CL:0000306,1.16e-07,4;CL:0002222,1.16e-07,4;CL:0002224,1.16e-07,4;CL:0000359,1.48e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.23e-09!14 | |ontology_enrichment_disease=DOID:2394!1.23e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.79e-12;14!DOID:2513;1.05e-08;1!DOID:193;3.81e-08;29!DOID:5662;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.36e-12,14;DOID:2513,1.05e-08,1;DOID:193,3.57e-08,29;DOID:5662,5.82e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.06e-12!11;UBERON:0004872!1.84e-11!84;UBERON:0002049!2.31e-11!79;UBERON:0007798!2.31e-11!79;UBERON:0000020!6.35e-11!23;UBERON:0001981!7.55e-11!60;UBERON:0007500!7.55e-11!60;UBERON:0004537!7.55e-11!60;UBERON:0006965!7.55e-11!60;UBERON:0001032!2.54e-10!24;UBERON:0004456!2.54e-10!24;UBERON:0004535!4.01e-10!110;UBERON:0001009!1.31e-09!113;UBERON:0000970!3.94e-09!20;UBERON:0000488!1.20e-08!4;UBERON:0001456!1.21e-08!21;UBERON:0001637!1.36e-08!42;UBERON:0003509!1.36e-08!42;UBERON:0004572!1.36e-08!42;UBERON:0000055!1.39e-08!69;UBERON:0002104!1.45e-08!21;UBERON:0003914!1.83e-08!118;UBERON:0000019!4.65e-08!19;UBERON:0000047!4.65e-08!19;UBERON:0004088!4.65e-08!19;UBERON:0003072!4.65e-08!19;UBERON:0003071!4.65e-08!19;UBERON:0004128!4.65e-08!19;UBERON:0000475!1.56e-07!365;UBERON:0002097!3.67e-07!40;UBERON:0000490!4.15e-07!138;UBERON:0001048!4.40e-07!168;UBERON:0001778!5.31e-07!3;UBERON:0001775!5.31e-07!3;UBERON:0002199!7.40e-07!45;UBERON:0002416!7.40e-07!45;UBERON:0004573!9.68e-07!33;UBERON:0004571!9.68e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;6.07e-28;4!UBERON:0007625;5.98e-22;11!UBERON:0001778;1.21e-21;3!UBERON:0001775;1.21e-21;3!UBERON:0002203;1.01e-18;6!UBERON:0001768;1.01e-18;6!UBERON:0002200;1.01e-18;6!UBERON:0001801;3.75e-17;14!UBERON:0003513;2.47e-16;7!UBERON:0003834;1.72e-13;5!UBERON:0001533;1.72e-13;5!UBERON:0000019;1.63e-12;19!UBERON:0000047;1.63e-12;19!UBERON:0004088;1.63e-12;19!UBERON:0010230;1.63e-12;19!UBERON:0000970;7.30e-12;20!UBERON:0002104;2.83e-11;21!UBERON:0001456;2.83e-11;21!UBERON:0006876;2.71e-10;11!UBERON:0000020;3.00e-10;23!UBERON:0001032;8.41e-10;24!UBERON:0004456;8.41e-10;24!UBERON:0002049;9.15e-09;75!UBERON:0007798;9.15e-09;75!UBERON:0000992;1.18e-08;13!UBERON:0004573;2.35e-08;33!UBERON:0004571;2.35e-08;33!UBERON:0002506;4.72e-08;1!UBERON:0001769;4.72e-08;1!UBERON:0001637;9.20e-08;42!UBERON:0003509;9.20e-08;42!UBERON:0004572;9.20e-08;42!UBERON:0010077;1.20e-07;4!UBERON:0005389;1.20e-07;4!UBERON:0000484;1.20e-07;4!UBERON:0000965;1.20e-07;4!UBERON:0001803;1.20e-07;4!UBERON:0002119;1.20e-07;4!UBERON:0010371;2.70e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,6.75e-28,4;UBERON:0007625,6.10e-22,11;UBERON:0001778,8.83e-22,3;UBERON:0001775,8.83e-22,3;UBERON:0002203,1.09e-18,6;UBERON:0001768,1.09e-18,6;UBERON:0002200,1.09e-18,6;UBERON:0001801,3.81e-17,14;UBERON:0003513,2.42e-16,7;UBERON:0002049,8.41e-15,78;UBERON:0007798,8.41e-15,78;UBERON:0003834,1.62e-13,5;UBERON:0001533,1.62e-13,5;UBERON:0000019,7.38e-12,20;UBERON:0000047,7.38e-12,20;UBERON:0010312,7.38e-12,20;UBERON:0004088,7.38e-12,20;UBERON:0010230,7.38e-12,20;UBERON:0003072,7.38e-12,20;UBERON:0004128,7.38e-12,20;UBERON:0003071,7.38e-12,20;UBERON:0000970,2.86e-11,21;UBERON:0002104,2.86e-11,21;UBERON:0001456,9.81e-11,22;UBERON:0006876,2.81e-10,11;UBERON:0007500,3.55e-10,59;UBERON:0001981,3.55e-10,59;UBERON:0004537,3.55e-10,59;UBERON:0006965,3.55e-10,59;UBERON:0004535,7.86e-10,109;UBERON:0000020,8.48e-10,24;UBERON:0001032,8.48e-10,24;UBERON:0004456,8.48e-10,24;UBERON:0004573,9.61e-10,33;UBERON:0004571,9.61e-10,33;UBERON:0001637,1.14e-09,42;UBERON:0003509,1.14e-09,42;UBERON:0004572,1.14e-09,42;UBERON:0001009,1.70e-09,112;UBERON:0000992,1.02e-08,13;UBERON:0000055,1.31e-08,68;UBERON:0002506,7.16e-08,1;UBERON:0001769,7.16e-08,1;UBERON:0002119,1.08e-07,4;UBERON:0010077,1.16e-07,4;UBERON:0005389,1.16e-07,4;UBERON:0000484,1.16e-07,4;UBERON:0002546,1.16e-07,4;UBERON:0000965,1.16e-07,4;UBERON:0001803,1.16e-07,4;UBERON:0003073,1.16e-07,4;UBERON:0005426,1.16e-07,4;UBERON:0000490,1.51e-07,148;UBERON:0005085,1.81e-07,31;UBERON:0004872,9.40e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,3.54767035940102,4.0404001418838,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,2.09749718104953,0,0.417989933073621,0,0,0,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0,0.624320153660641,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.635795703478686,0.600182192168805,0.412210116953756,0.515281080091258,0.558350568994769,0,0,0.504867548488229,0.276149695926898,0.484938170456436,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,1.44331342025273,0.231860809950154,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,2.39344304926383,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,4.43687148900173,0,0,0,0,0,2.86382923133343,0,0,0,0,0,4.75530963519025,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,2.75682671773062,5.30751180192976,4.38450885253763,0,0,0.811641507850816,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0,0,8.08702927920699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0,0,2.28993983504656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,2.14882720709979,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0.777186002913902,0,1.27437413730962,0,1.70789252563885,0.414706207840855,0.797525143673985,7.30443086536427,0.450772826991655,0,0,1.63663793282303,0,0.464033759878494,15.9238355479446,0,0,0,0,0,0,2.60994291965212,0.226705925512272,0,0,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0.112131862580613,0.12729431655633,0.202117188958219,0.870866991587845,0.684466602170562,0.26940821205835,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,3.54767035940102,4.0404001418838,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,2.09749718104953,0,0.417989933073621,0,0,0,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0,0.624320153660641,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.635795703478686,0.600182192168805,0.412210116953756,0.515281080091258,0.558350568994769,0,0,0.504867548488229,0.276149695926898,0.484938170456436,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,1.44331342025273,0.231860809950154,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,2.39344304926383,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,4.43687148900173,0,0,0,0,0,2.86382923133343,0,0,0,0,0,4.75530963519025,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,2.75682671773062,5.30751180192976,4.38450885253763,0,0,0.811641507850816,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0,0,8.08702927920699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0,0,2.28993983504656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,2.14882720709979,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0.777186002913902,0,1.27437413730962,0,1.70789252563885,0.414706207840855,0.797525143673985,7.30443086536427,0.450772826991655,0,0,1.63663793282303,0,0.464033759878494,15.9238355479446,0,0,0,0,0,0,2.60994291965212,0.226705925512272,0,0,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0.112131862580613,0.12729431655633,0.202117188958219,0.870866991587845,0.684466602170562,0.26940821205835,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p7@DIO2 | |short_description=p7@DIO2 | ||
}} | }} |
Latest revision as of 07:36, 16 September 2015
Short description: | p7@DIO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DIO2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000553594_5end |
EntrezGene: | NA |
HGNC: | 2884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.83e-22 | 3 |
ciliated epithelial cell | 8.83e-22 | 3 |
multi-ciliated epithelial cell | 8.83e-22 | 3 |
non-pigmented ciliary epithelial cell | 8.83e-22 | 3 |
smooth muscle cell of the subclavian artery | 1.62e-13 | 5 |
follicular cell of ovary | 2.69e-08 | 1 |
granulosa cell | 2.69e-08 | 1 |
pigment cell (sensu Vertebrata) | 7.16e-08 | 1 |
iris pigment epithelial cell | 7.16e-08 | 1 |
crystallin accumulating cell | 1.16e-07 | 4 |
vertebrate lens cell | 1.16e-07 | 4 |
lens epithelial cell | 1.16e-07 | 4 |
vascular associated smooth muscle cell | 1.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.36e-12 | 14 |
basal cell carcinoma | 1.05e-08 | 1 |
reproductive organ cancer | 3.57e-08 | 29 |
pleomorphic carcinoma | 5.82e-08 | 1 |