FFCP PHASE1:Hg19::chr10:11206863..11206877,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:11206863..11206877,+ to FFCP PHASE1:Hg19::chr10:11206863..11206877,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10659 | |EntrezGene=10659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2550 | |HGNC=2550 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VZZ6,O95319 | |UniProt=Q5VZZ6,O95319 | ||
|association_with_transcript=-115bp_to_ENST00000315874,ENST00000354440,ENST00000354897,ENST00000427450,NM_001025076,NM_001083591,uc001iko.3,uc001ikp.3,uc010qbk.1,uc010qbl.1,uc010qbm.1_5end | |||
|cluster_id=chr10:11206863..11206877,+ | |||
|description=CAGE_peak_18_at_CELF2_5end | |||
|id=chr10:11206863..11206877,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.26e-35!172;CL:0000566!1.26e-35!172;CL:0000988!3.84e-33!182;CL:0002032!3.43e-32!165;CL:0000837!3.43e-32!165;CL:0000738!5.69e-28!140;CL:0000542!2.11e-24!53;CL:0000051!2.11e-24!53;CL:0000838!9.06e-24!52;CL:0000084!6.50e-22!25;CL:0000827!6.50e-22!25;CL:0002087!2.45e-20!119;CL:0002031!1.81e-19!124;CL:0000791!1.48e-17!18;CL:0000789!1.48e-17!18;CL:0002420!1.48e-17!18;CL:0002419!1.48e-17!18;CL:0000790!1.48e-17!18;CL:0000763!2.86e-11!112;CL:0000049!2.86e-11!112;CL:0000625!2.90e-09!11;CL:0000624!4.91e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.22e-35;18!CL:0000789;2.22e-35;18!CL:0002419;2.22e-35;18!CL:0000084;4.12e-32;25!CL:0000624;2.99e-21;6!CL:0000542;1.71e-15;53!CL:0000625;7.72e-15;11!CL:0000623;2.94e-12;3!CL:0000226;6.95e-11;3!CL:0000898;6.95e-11;3!CL:0000842;6.95e-11;3!CL:0000815;1.31e-07;2!CL:0000792;1.31e-07;2!CL:0002677;1.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-35,18;CL:0000789,1.24e-35,18;CL:0002420,1.24e-35,18;CL:0002419,1.24e-35,18;CL:0000790,1.24e-35,18;CL:0000084,2.31e-32,25;CL:0000827,2.31e-32,25;CL:0000838,2.90e-30,52;CL:0000542,1.40e-29,53;CL:0000051,1.40e-29,53;CL:0000037,1.14e-22,168;CL:0000624,2.19e-21,6;CL:0000988,4.80e-21,177;CL:0002032,1.09e-19,161;CL:0000837,1.09e-19,161;CL:0000738,2.47e-18,136;CL:0002087,9.19e-17,115;CL:0000625,7.76e-15,11;CL:0002031,3.58e-13,120;CL:0000623,2.59e-12,3;CL:0000825,2.59e-12,3;CL:0000226,4.00e-11,3;CL:0000842,4.00e-11,3;CL:0000898,4.60e-11,3;CL:0000893,4.43e-08,2;CL:0002489,4.43e-08,2;CL:0000809,4.43e-08,2;CL:0000808,4.43e-08,2;CL:0000894,4.43e-08,2;CL:0000806,4.43e-08,2;CL:0000807,4.43e-08,2;CL:0000805,4.43e-08,2;CL:0002425,4.43e-08,2;CL:0000815,8.06e-08,2;CL:0000792,8.06e-08,2;CL:0002677,8.06e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-35;18!CL:0000051;1.71e-15;53!CL:0002425;6.52e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!1.03e-11!51;DOID:0060083!1.03e-11!51;DOID:1240!1.09e-11!39;DOID:8692!2.34e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-11!115;UBERON:0000178!9.51e-11!15;UBERON:0000179!9.51e-11!15;UBERON:0000463!9.51e-11!15;UBERON:0002390!1.28e-10!102;UBERON:0003061!1.28e-10!102;UBERON:0002193!3.25e-09!112;UBERON:0004177!2.40e-08!7;UBERON:0002020!2.46e-08!34;UBERON:0003528!2.46e-08!34;UBERON:0001049!1.33e-07!57;UBERON:0005068!1.33e-07!57;UBERON:0006241!1.33e-07!57;UBERON:0007135!1.33e-07!57;UBERON:0001893!2.02e-07!34;UBERON:0001869!3.08e-07!32;UBERON:0002791!5.77e-07!33;UBERON:0002619!9.37e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-10;15!UBERON:0000179;1.77e-10;15!UBERON:0000463;1.77e-10;15!UBERON:0002370;6.52e-08;2!UBERON:0005058;6.52e-08;2!UBERON:0009113;6.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.93e-14,4;UBERON:0005058,2.93e-14,4;UBERON:0009113,2.93e-14,4;UBERON:0003295,2.93e-14,4;UBERON:0005562,2.93e-14,4;UBERON:0000178,1.37e-10,15;UBERON:0000179,1.37e-10,15;UBERON:0000463,1.37e-10,15;UBERON:0003351,1.57e-09,6;UBERON:0004177,3.58e-08,7;UBERON:0005057,3.58e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.985207073399349,1.57421562627358,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0.880801318004542,0.553995408531877,2.20598892217156,1.30206522429511,0,0.971680998056939,0,0,0.377875943688809,0.242584061187816,0,0,0,0.575384784644301,0.512321413058201,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0.852449501065388,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,3.41527781465669,1.17447437874188,1.14681968437569,3.96513985737078,5.60508562981536,0,3.14735632182133,5.50215067848831,3.28962398399215,0.501559486172034,1.30368906653436,0.946895611469467,0,1.00269411196656,1.76763544484902,3.1014745241707,0.541607727530031,1.40900451698243,1.04047478047903,0.657751618414705,0.552700035571697,0.869409257205157,1.03800594213442,2.67540828089713,0,1.58633079776593,2.29932296161153,2.40539211837841,3.28925599625354,1.27426165729639,1.30216690771284,0,1.35517607169996,1.27986611154418,0,0.710331756132051,0.821127996921047,3.42731463482045,5.88368430723716,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0.414656231081544,2.16179930125442,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,4.92576900504818,7.97822026980214,3.85029108839245,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,1.50999940573032,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,2.02979043692868,0.764637207142375,0.569647187174163,1.66762242820452,0.411362273086194,0.648473311192717,2.16012574895246,0,0,0,0,0.185803175125719,0,0.711418433484141,1.75368900001705,9.18065108590956,6.51118258450047,2.32840940996271,0.649243880549111,7.30072663094993,8.21644844519492,0,0,1.01575066680962,0.802940375518498,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.422008249231538,0,1.15362711958732,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,2.35470384592537,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.530745387020035,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.92290463259083,0.797189041880179,0.654261577023377,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,1.09394961803644,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.339848664884159,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.187967835959707,0.515663103788617,0.199882311849858,0,0,0,0,0.458729283404541,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,1.22718928688412,2.3588391432426,0,0.0636471582781649,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.985207073399349,1.57421562627358,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0.880801318004542,0.553995408531877,2.20598892217156,1.30206522429511,0,0.971680998056939,0,0,0.377875943688809,0.242584061187816,0,0,0,0.575384784644301,0.512321413058201,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0.852449501065388,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,3.41527781465669,1.17447437874188,1.14681968437569,3.96513985737078,5.60508562981536,0,3.14735632182133,5.50215067848831,3.28962398399215,0.501559486172034,1.30368906653436,0.946895611469467,0,1.00269411196656,1.76763544484902,3.1014745241707,0.541607727530031,1.40900451698243,1.04047478047903,0.657751618414705,0.552700035571697,0.869409257205157,1.03800594213442,2.67540828089713,0,1.58633079776593,2.29932296161153,2.40539211837841,3.28925599625354,1.27426165729639,1.30216690771284,0,1.35517607169996,1.27986611154418,0,0.710331756132051,0.821127996921047,3.42731463482045,5.88368430723716,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0.414656231081544,2.16179930125442,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,4.92576900504818,7.97822026980214,3.85029108839245,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,1.50999940573032,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,2.02979043692868,0.764637207142375,0.569647187174163,1.66762242820452,0.411362273086194,0.648473311192717,2.16012574895246,0,0,0,0,0.185803175125719,0,0.711418433484141,1.75368900001705,9.18065108590956,6.51118258450047,2.32840940996271,0.649243880549111,7.30072663094993,8.21644844519492,0,0,1.01575066680962,0.802940375518498,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.422008249231538,0,1.15362711958732,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,2.35470384592537,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.530745387020035,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.92290463259083,0.797189041880179,0.654261577023377,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,1.09394961803644,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.339848664884159,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.187967835959707,0.515663103788617,0.199882311849858,0,0,0,0,0.458729283404541,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,1.22718928688412,2.3588391432426,0,0.0636471582781649,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p18@CELF2 | |||
}} | }} |
Latest revision as of 08:22, 16 September 2015
Short description: | p18@CELF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CELF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000315874, ENST00000354440, ENST00000354897, ENST00000427450, NM_001025076, NM_001083591, uc001iko.3, uc001ikp.3, uc010qbk.1, uc010qbl.1, uc010qbm.1_5end |
EntrezGene: | CELF2 |
HGNC: | 2550 |
UniProt: | Q5VZZ6O95319 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.93e-14 | 4 |
hemolymphoid system gland | 2.93e-14 | 4 |
thymic region | 2.93e-14 | 4 |
pharyngeal gland | 2.93e-14 | 4 |
thymus primordium | 2.93e-14 | 4 |
blood | 1.37e-10 | 15 |
haemolymphatic fluid | 1.37e-10 | 15 |
organism substance | 1.37e-10 | 15 |
pharyngeal epithelium | 1.57e-09 | 6 |
hemopoietic organ | 3.58e-08 | 7 |
immune organ | 3.58e-08 | 7 |