FFCP PHASE1:Hg19::chr13:102142296..102142310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ02 | |UniProt=B4DQ02 | ||
|association_with_transcript=0bp_to_ENST00000376162_5end | |association_with_transcript=0bp_to_ENST00000376162_5end | ||
|cluster_id=chr13:102142296..102142310,+ | |||
|description=CAGE_peak_16_at_ITGBL1_5end | |description=CAGE_peak_16_at_ITGBL1_5end | ||
|id=chr13:102142296..102142310,+ | |id=chr13:102142296..102142310,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.01e-27!24;CL:0000071!2.11e-19!18;CL:0002546!2.11e-19!18;CL:0000115!6.16e-18!35;CL:0000213!5.87e-17!57;CL:0000215!5.87e-17!57;CL:0000076!3.46e-15!62;CL:0002078!1.38e-13!44;CL:0002541!1.62e-12!3;CL:0002618!1.75e-12!3;CL:0002543!1.54e-10!6;CL:0002544!2.45e-10!6;CL:0005020!5.02e-10!6;CL:0002138!5.02e-10!6;CL:0005022!5.02e-10!6;CL:0000222!1.28e-07!119;CL:1000413!6.86e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.01e-27!24;CL:0000071!2.11e-19!18;CL:0002546!2.11e-19!18;CL:0000115!6.16e-18!35;CL:0000213!5.87e-17!57;CL:0000215!5.87e-17!57;CL:0000076!3.46e-15!62;CL:0002078!1.38e-13!44;CL:0002541!1.62e-12!3;CL:0002618!1.75e-12!3;CL:0002543!1.54e-10!6;CL:0002544!2.45e-10!6;CL:0005020!5.02e-10!6;CL:0002138!5.02e-10!6;CL:0005022!5.02e-10!6;CL:0000222!1.28e-07!119;CL:1000413!6.86e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.41e-13;24!CL:0002618;1.96e-12;3!CL:0002541;2.74e-12;3!CL:0002144;2.74e-12;3!CL:0000071;2.33e-08;18!CL:0002543;7.37e-07;6!CL:0002138;7.37e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;3.41e-13;24!CL:0002618;1.96e-12;3!CL:0002541;2.74e-12;3!CL:0002144;2.74e-12;3!CL:0000071;2.33e-08;18!CL:0002543;7.37e-07;6!CL:0002138;7.37e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.20e-13,24;CL:0002618,2.07e-12,3;CL:0002144,2.31e-12,3;CL:0002541,3.24e-12,3;CL:0000213,1.02e-09,58;CL:0000215,1.02e-09,58;CL:0000115,4.60e-09,36;CL:0000071,2.25e-08,18;CL:0002546,2.25e-08,18;CL:0002078,2.18e-07,45;CL:0005020,7.17e-07,6;CL:0002138,7.17e-07,6;CL:0005022,7.17e-07,6;CL:0002543,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-08;18!CL:0005022;7.37e-07;6 | |ontology_enrichment_development_v019=CL:0002546;2.33e-08;18!CL:0005022;7.37e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.11e-19!18;UBERON:0004638!2.11e-19!18;UBERON:0004852!2.11e-19!18;UBERON:0000487!1.72e-15!22;UBERON:0006914!2.22e-13!25;UBERON:0000476!1.62e-12!3;UBERON:0000920!1.62e-12!3;UBERON:0002066!2.39e-12!5;UBERON:0000478!2.31e-11!24;UBERON:0002046!3.02e-11!5;UBERON:0004117!3.02e-11!5;UBERON:0007689!3.02e-11!5;UBERON:0007123!3.02e-11!5;UBERON:0003091!3.02e-11!5;UBERON:0001638!2.91e-10!9;UBERON:0003920!2.91e-10!9;UBERON:0004582!2.91e-10!9;UBERON:0000055!5.52e-10!69;UBERON:0001009!2.48e-08!113;UBERON:0002049!2.90e-08!79;UBERON:0007798!2.90e-08!79;UBERON:0004535!1.17e-07!110;UBERON:0001473!1.59e-07!8;UBERON:0004536!1.59e-07!8;UBERON:0006558!1.59e-07!8;UBERON:0003915!6.86e-07!9;UBERON:0004700!6.86e-07!9;UBERON:0001917!6.86e-07!9 | |ontology_enrichment_uberon=UBERON:0001986!2.11e-19!18;UBERON:0004638!2.11e-19!18;UBERON:0004852!2.11e-19!18;UBERON:0000487!1.72e-15!22;UBERON:0006914!2.22e-13!25;UBERON:0000476!1.62e-12!3;UBERON:0000920!1.62e-12!3;UBERON:0002066!2.39e-12!5;UBERON:0000478!2.31e-11!24;UBERON:0002046!3.02e-11!5;UBERON:0004117!3.02e-11!5;UBERON:0007689!3.02e-11!5;UBERON:0007123!3.02e-11!5;UBERON:0003091!3.02e-11!5;UBERON:0001638!2.91e-10!9;UBERON:0003920!2.91e-10!9;UBERON:0004582!2.91e-10!9;UBERON:0000055!5.52e-10!69;UBERON:0001009!2.48e-08!113;UBERON:0002049!2.90e-08!79;UBERON:0007798!2.90e-08!79;UBERON:0004535!1.17e-07!110;UBERON:0001473!1.59e-07!8;UBERON:0004536!1.59e-07!8;UBERON:0006558!1.59e-07!8;UBERON:0003915!6.86e-07!9;UBERON:0004700!6.86e-07!9;UBERON:0001917!6.86e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0004638;2.33e-08;18!UBERON:0001986;2.33e-08;18!UBERON:0004852;2.33e-08;18!UBERON:0002066;5.54e-08;5!UBERON:0000487;5.24e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0004638;2.33e-08;18!UBERON:0001986;2.33e-08;18!UBERON:0004852;2.33e-08;18!UBERON:0002066;5.54e-08;5!UBERON:0000487;5.24e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0000920,3.24e-12,3;UBERON:0004638,2.25e-08,18;UBERON:0001986,2.25e-08,18;UBERON:0004852,2.25e-08,18;UBERON:0002066,5.73e-08,5;UBERON:0000487,5.09e-07,22 | |||
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| ||
|short_description=p16@ITGBL1 | |short_description=p16@ITGBL1 | ||
}} | }} |
Latest revision as of 08:46, 16 September 2015
Short description: | p16@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ITGBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376162_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B4DQ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.20e-13 | 24 |
endothelial cell of umbilical vein | 2.07e-12 | 3 |
capillary endothelial cell | 2.31e-12 | 3 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
lining cell | 1.02e-09 | 58 |
barrier cell | 1.02e-09 | 58 |
endothelial cell | 4.60e-09 | 36 |
blood vessel endothelial cell | 2.25e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.25e-08 | 18 |
meso-epithelial cell | 2.18e-07 | 45 |
lymphangioblast | 7.17e-07 | 6 |
endothelial cell of lymphatic vessel | 7.17e-07 | 6 |
vascular lymphangioblast | 7.17e-07 | 6 |
vein endothelial cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
egg chorion | 3.24e-12 | 3 |
blood vessel endothelium | 2.25e-08 | 18 |
endothelium | 2.25e-08 | 18 |
cardiovascular system endothelium | 2.25e-08 | 18 |
umbilical vein | 5.73e-08 | 5 |
simple squamous epithelium | 5.09e-07 | 22 |