FFCP PHASE1:Hg19::chr3:159557799..159557818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000483730_5end | |association_with_transcript=-30bp_to_ENST00000483730_5end | ||
|cluster_id=chr3:159557799..159557818,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_6_at_SCHIP1_5end | |description=CAGE_peak_6_at_SCHIP1_5end | ||
|id=chr3:159557799..159557818,+ | |id=chr3:159557799..159557818,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.06e-10!25;CL:0000047!1.80e-08!8;CL:0000133!1.60e-07!59 | |ontology_enrichment_celltype=CL:0002319!5.06e-10!25;CL:0000047!1.80e-08!8;CL:0000133!1.60e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.85e-11;25!CL:0000540;6.47e-07;6!CL:0000404;6.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.11e-11,25;CL:0000133,2.06e-10,59;CL:0000047,4.12e-10,8;CL:0000221,1.74e-07,72;CL:0000540,5.18e-07,6;CL:0000031,5.18e-07,6;CL:0000404,5.18e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-14;82!CL:0000133;4.47e-07;59!CL:0000031;6.47e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-62!94;UBERON:0001016!1.04e-62!94;UBERON:0005743!4.01e-58!86;UBERON:0001017!1.58e-55!82;UBERON:0001049!1.53e-52!57;UBERON:0005068!1.53e-52!57;UBERON:0006241!1.53e-52!57;UBERON:0007135!1.53e-52!57;UBERON:0003075!1.94e-48!86;UBERON:0007284!1.94e-48!86;UBERON:0002346!4.53e-45!90;UBERON:0002616!6.57e-45!59;UBERON:0004121!1.08e-43!169;UBERON:0000955!2.56e-43!69;UBERON:0006238!2.56e-43!69;UBERON:0000924!7.70e-42!173;UBERON:0006601!7.70e-42!173;UBERON:0002780!1.32e-41!41;UBERON:0001890!1.32e-41!41;UBERON:0006240!1.32e-41!41;UBERON:0003080!3.23e-40!42;UBERON:0003056!9.71e-39!61;UBERON:0007023!1.70e-38!115;UBERON:0001893!1.52e-37!34;UBERON:0002020!1.87e-37!34;UBERON:0003528!1.87e-37!34;UBERON:0002791!1.80e-36!33;UBERON:0001869!1.93e-35!32;UBERON:0000033!2.98e-33!123;UBERON:0000153!4.41e-33!129;UBERON:0007811!4.41e-33!129;UBERON:0000956!3.51e-28!25;UBERON:0000203!3.51e-28!25;UBERON:0002619!1.61e-25!22;UBERON:0001950!2.40e-23!20;UBERON:0000025!1.00e-15!194;UBERON:0000119!1.49e-15!312;UBERON:0000483!4.58e-15!309;UBERON:0003076!4.81e-13!15;UBERON:0003057!4.81e-13!15;UBERON:0000064!1.95e-12!219;UBERON:0004111!3.08e-12!241;UBERON:0000922!2.28e-11!612;UBERON:0004732!3.57e-11!13;UBERON:0002420!6.16e-11!9;UBERON:0007245!6.16e-11!9;UBERON:0010009!6.16e-11!9;UBERON:0010011!6.16e-11!9;UBERON:0000454!6.16e-11!9;UBERON:0000477!9.39e-11!286;UBERON:0002308!1.32e-10!9;UBERON:0000125!1.32e-10!9;UBERON:0000475!4.13e-10!365;UBERON:0004733!4.25e-10!12;UBERON:0002028!4.25e-10!12;UBERON:0007277!4.25e-10!12;UBERON:0001871!1.34e-09!7;UBERON:0000468!1.37e-09!659;UBERON:0000467!2.49e-09!625;UBERON:0000480!3.08e-09!626;UBERON:0000923!5.70e-09!604;UBERON:0005291!5.70e-09!604;UBERON:0006598!5.70e-09!604;UBERON:0002532!5.70e-09!604;UBERON:0002050!7.01e-09!605;UBERON:0005423!7.01e-09!605;UBERON:0009663!1.11e-08!7;UBERON:0000481!1.86e-08!347;UBERON:0000200!4.11e-08!6;UBERON:0002680!2.62e-07!9;UBERON:0001895!2.62e-07!9;UBERON:0010092!2.62e-07!9;UBERON:0002298!4.67e-07!8;UBERON:0007625!4.90e-07!11;UBERON:0000349!5.79e-07!5;UBERON:0001872!8.10e-07!5;UBERON:0002021!8.58e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!1.04e-62!94;UBERON:0001016!1.04e-62!94;UBERON:0005743!4.01e-58!86;UBERON:0001017!1.58e-55!82;UBERON:0001049!1.53e-52!57;UBERON:0005068!1.53e-52!57;UBERON:0006241!1.53e-52!57;UBERON:0007135!1.53e-52!57;UBERON:0003075!1.94e-48!86;UBERON:0007284!1.94e-48!86;UBERON:0002346!4.53e-45!90;UBERON:0002616!6.57e-45!59;UBERON:0004121!1.08e-43!169;UBERON:0000955!2.56e-43!69;UBERON:0006238!2.56e-43!69;UBERON:0000924!7.70e-42!173;UBERON:0006601!7.70e-42!173;UBERON:0002780!1.32e-41!41;UBERON:0001890!1.32e-41!41;UBERON:0006240!1.32e-41!41;UBERON:0003080!3.23e-40!42;UBERON:0003056!9.71e-39!61;UBERON:0007023!1.70e-38!115;UBERON:0001893!1.52e-37!34;UBERON:0002020!1.87e-37!34;UBERON:0003528!1.87e-37!34;UBERON:0002791!1.80e-36!33;UBERON:0001869!1.93e-35!32;UBERON:0000033!2.98e-33!123;UBERON:0000153!4.41e-33!129;UBERON:0007811!4.41e-33!129;UBERON:0000956!3.51e-28!25;UBERON:0000203!3.51e-28!25;UBERON:0002619!1.61e-25!22;UBERON:0001950!2.40e-23!20;UBERON:0000025!1.00e-15!194;UBERON:0000119!1.49e-15!312;UBERON:0000483!4.58e-15!309;UBERON:0003076!4.81e-13!15;UBERON:0003057!4.81e-13!15;UBERON:0000064!1.95e-12!219;UBERON:0004111!3.08e-12!241;UBERON:0000922!2.28e-11!612;UBERON:0004732!3.57e-11!13;UBERON:0002420!6.16e-11!9;UBERON:0007245!6.16e-11!9;UBERON:0010009!6.16e-11!9;UBERON:0010011!6.16e-11!9;UBERON:0000454!6.16e-11!9;UBERON:0000477!9.39e-11!286;UBERON:0002308!1.32e-10!9;UBERON:0000125!1.32e-10!9;UBERON:0000475!4.13e-10!365;UBERON:0004733!4.25e-10!12;UBERON:0002028!4.25e-10!12;UBERON:0007277!4.25e-10!12;UBERON:0001871!1.34e-09!7;UBERON:0000468!1.37e-09!659;UBERON:0000467!2.49e-09!625;UBERON:0000480!3.08e-09!626;UBERON:0000923!5.70e-09!604;UBERON:0005291!5.70e-09!604;UBERON:0006598!5.70e-09!604;UBERON:0002532!5.70e-09!604;UBERON:0002050!7.01e-09!605;UBERON:0005423!7.01e-09!605;UBERON:0009663!1.11e-08!7;UBERON:0000481!1.86e-08!347;UBERON:0000200!4.11e-08!6;UBERON:0002680!2.62e-07!9;UBERON:0001895!2.62e-07!9;UBERON:0010092!2.62e-07!9;UBERON:0002298!4.67e-07!8;UBERON:0007625!4.90e-07!11;UBERON:0000349!5.79e-07!5;UBERON:0001872!8.10e-07!5;UBERON:0002021!8.58e-07!5 | ||
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| ||
|short_description=p6@SCHIP1 | |short_description=p6@SCHIP1 | ||
}} | }} |
Latest revision as of 09:39, 16 September 2015
Short description: | p6@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCHIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -30bp_to_ENST00000483730_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.11e-11 | 25 |
neurectodermal cell | 2.06e-10 | 59 |
neuronal stem cell | 4.12e-10 | 8 |
ectodermal cell | 1.74e-07 | 72 |
neuron | 5.18e-07 | 6 |
neuroblast | 5.18e-07 | 6 |
electrically signaling cell | 5.18e-07 | 6 |