FFCP PHASE1:Hg19::chr2:242447692..242447726,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10494 | |EntrezGene=10494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11404 | |HGNC=11404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002wbm.2_5end | |association_with_transcript=0bp_to_uc002wbm.2_5end | ||
|cluster_id=chr2:242447692..242447726,- | |||
|coexpression_cluster_id=C843 | |coexpression_cluster_id=C843 | ||
|description=CAGE_peak_4_at_STK25_5end | |description=CAGE_peak_4_at_STK25_5end | ||
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|ontology_enrichment_celltype=CL:0000220!5.24e-32!246;CL:0002321!1.76e-31!248;CL:0000222!4.04e-29!119;CL:0002078!5.39e-19!44;CL:0000055!1.22e-18!180;CL:0000115!3.32e-18!35;CL:0002139!8.38e-17!24;CL:0000213!1.25e-16!57;CL:0000215!1.25e-16!57;CL:0000066!1.83e-13!254;CL:0000071!4.08e-13!18;CL:0002546!4.08e-13!18;CL:0000183!8.66e-13!59;CL:0000680!2.40e-11!57;CL:0000056!2.40e-11!57;CL:0000355!2.40e-11!57;CL:0000187!1.15e-10!54;CL:0000393!2.64e-10!60;CL:0000211!2.64e-10!60;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:0000144!1.09e-08!625;CL:1000449!2.66e-08!16;CL:0000057!3.78e-08!75;CL:0000359!8.43e-08!32;CL:1000497!1.65e-07!18;CL:0002518!1.65e-07!18;CL:0000548!2.00e-07!679;CL:0000004!2.00e-07!679;CL:0000255!2.00e-07!679;CL:1000413!2.25e-07!9;CL:0002371!2.25e-07!591;CL:0000012!2.45e-07!682;CL:0002681!3.72e-07!13;CL:0002584!3.72e-07!13 | |ontology_enrichment_celltype=CL:0000220!5.24e-32!246;CL:0002321!1.76e-31!248;CL:0000222!4.04e-29!119;CL:0002078!5.39e-19!44;CL:0000055!1.22e-18!180;CL:0000115!3.32e-18!35;CL:0002139!8.38e-17!24;CL:0000213!1.25e-16!57;CL:0000215!1.25e-16!57;CL:0000066!1.83e-13!254;CL:0000071!4.08e-13!18;CL:0002546!4.08e-13!18;CL:0000183!8.66e-13!59;CL:0000680!2.40e-11!57;CL:0000056!2.40e-11!57;CL:0000355!2.40e-11!57;CL:0000187!1.15e-10!54;CL:0000393!2.64e-10!60;CL:0000211!2.64e-10!60;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:0000144!1.09e-08!625;CL:1000449!2.66e-08!16;CL:0000057!3.78e-08!75;CL:0000359!8.43e-08!32;CL:1000497!1.65e-07!18;CL:0002518!1.65e-07!18;CL:0000548!2.00e-07!679;CL:0000004!2.00e-07!679;CL:0000255!2.00e-07!679;CL:1000413!2.25e-07!9;CL:0002371!2.25e-07!591;CL:0000012!2.45e-07!682;CL:0002681!3.72e-07!13;CL:0002584!3.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.61e-18;24!CL:0000115;4.00e-17;36!CL:0000071;2.01e-14;18!CL:0002078;3.29e-13;45!CL:0000213;5.60e-11;58!CL:0000215;5.60e-11;58!CL:1000449;1.68e-09;15!CL:1000497;1.45e-08;17!CL:0002518;1.45e-08;17!CL:0002681;1.71e-08;12!CL:0002584;1.71e-08;12!CL:1000413;4.95e-08;9!CL:0000359;2.65e-07;32 | |ontology_enrichment_celltype_v019=CL:0002139;1.61e-18;24!CL:0000115;4.00e-17;36!CL:0000071;2.01e-14;18!CL:0002078;3.29e-13;45!CL:0000213;5.60e-11;58!CL:0000215;5.60e-11;58!CL:1000449;1.68e-09;15!CL:1000497;1.45e-08;17!CL:0002518;1.45e-08;17!CL:0002681;1.71e-08;12!CL:0002584;1.71e-08;12!CL:1000413;4.95e-08;9!CL:0000359;2.65e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.05e-29,121;CL:0002321,3.71e-28,250;CL:0000115,3.49e-20,36;CL:0002078,3.95e-20,45;CL:0002139,3.43e-18,24;CL:0000213,2.58e-17,58;CL:0000215,2.58e-17,58;CL:0000071,3.63e-14,18;CL:0002546,3.63e-14,18;CL:0000680,1.97e-11,58;CL:0000056,1.97e-11,58;CL:0000355,1.97e-11,58;CL:0000187,1.06e-10,55;CL:0000066,1.24e-10,253;CL:0000393,3.95e-10,61;CL:0000211,3.95e-10,61;CL:1000449,1.32e-09,15;CL:0000192,2.56e-09,43;CL:0000514,2.56e-09,43;CL:1000497,1.19e-08,17;CL:0002518,1.19e-08,17;CL:0000057,1.28e-08,76;CL:0002681,2.21e-08,12;CL:0002584,2.21e-08,12;CL:0000359,3.87e-08,32;CL:1000413,6.62e-08,9;CL:0000076,9.90e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.01e-14;18!CL:0000222;6.78e-09;121 | |ontology_enrichment_development_v019=CL:0002546;2.01e-14;18!CL:0000222;6.78e-09;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.62e-25!312;UBERON:0000483!8.42e-25!309;UBERON:0003914!7.23e-21!118;UBERON:0002049!8.53e-21!79;UBERON:0007798!8.53e-21!79;UBERON:0005256!2.70e-19!143;UBERON:0000055!3.09e-19!69;UBERON:0000490!2.63e-18!138;UBERON:0004872!5.03e-18!84;UBERON:0000481!5.32e-17!347;UBERON:0001981!1.13e-16!60;UBERON:0007500!1.13e-16!60;UBERON:0004537!1.13e-16!60;UBERON:0006965!1.13e-16!60;UBERON:0002100!1.88e-16!216;UBERON:0000475!4.64e-16!365;UBERON:0000486!9.40e-16!82;UBERON:0000914!1.58e-15!83;UBERON:0002329!1.58e-15!83;UBERON:0003077!1.58e-15!83;UBERON:0003059!1.58e-15!83;UBERON:0007282!1.58e-15!83;UBERON:0009618!1.58e-15!83;UBERON:0007285!1.58e-15!83;UBERON:0000477!3.02e-15!286;UBERON:0003104!8.04e-15!238;UBERON:0009142!8.04e-15!238;UBERON:0004111!8.81e-15!241;UBERON:0004290!3.21e-14!70;UBERON:0004535!9.75e-14!110;UBERON:0001009!1.13e-13!113;UBERON:0000025!2.97e-13!194;UBERON:0001986!4.08e-13!18;UBERON:0004638!4.08e-13!18;UBERON:0004852!4.08e-13!18;UBERON:0001134!1.06e-12!61;UBERON:0002036!1.06e-12!61;UBERON:0003082!1.06e-12!61;UBERON:0000487!2.02e-12!22;UBERON:0006914!5.82e-12!25;UBERON:0002385!1.01e-11!63;UBERON:0001015!1.01e-11!63;UBERON:0000383!1.01e-11!63;UBERON:0001637!2.58e-11!42;UBERON:0003509!2.58e-11!42;UBERON:0004572!2.58e-11!42;UBERON:0000468!4.16e-11!659;UBERON:0000467!3.97e-10!625;UBERON:0000480!7.36e-10!626;UBERON:0002050!1.46e-08!605;UBERON:0005423!1.46e-08!605;UBERON:0000923!2.01e-08!604;UBERON:0005291!2.01e-08!604;UBERON:0006598!2.01e-08!604;UBERON:0002532!2.01e-08!604;UBERON:0004211!2.66e-08!16;UBERON:0001285!2.66e-08!16;UBERON:0007684!2.66e-08!16;UBERON:0003220!2.66e-08!16;UBERON:0004208!2.66e-08!16;UBERON:0000922!3.85e-08!612;UBERON:0000353!3.96e-08!17;UBERON:0006555!4.48e-08!17;UBERON:0005103!4.48e-08!17;UBERON:0000083!4.48e-08!17;UBERON:0009201!4.48e-08!17;UBERON:0004819!4.48e-08!17;UBERON:0006553!4.48e-08!17;UBERON:0003074!4.48e-08!17;UBERON:0003060!4.48e-08!17;UBERON:0004573!1.65e-07!33;UBERON:0004571!1.65e-07!33;UBERON:0003915!2.25e-07!9;UBERON:0004700!2.25e-07!9;UBERON:0001917!2.25e-07!9;UBERON:0001225!3.72e-07!13;UBERON:0008987!3.72e-07!13;UBERON:0000080!5.93e-07!18;UBERON:0002120!5.93e-07!18;UBERON:0004875!5.93e-07!18;UBERON:0005721!5.93e-07!18;UBERON:0005754!5.93e-07!18;UBERON:0007297!5.93e-07!18;UBERON:0001851!6.61e-07!16;UBERON:0004876!8.10e-07!20 | |ontology_enrichment_uberon=UBERON:0000119!4.62e-25!312;UBERON:0000483!8.42e-25!309;UBERON:0003914!7.23e-21!118;UBERON:0002049!8.53e-21!79;UBERON:0007798!8.53e-21!79;UBERON:0005256!2.70e-19!143;UBERON:0000055!3.09e-19!69;UBERON:0000490!2.63e-18!138;UBERON:0004872!5.03e-18!84;UBERON:0000481!5.32e-17!347;UBERON:0001981!1.13e-16!60;UBERON:0007500!1.13e-16!60;UBERON:0004537!1.13e-16!60;UBERON:0006965!1.13e-16!60;UBERON:0002100!1.88e-16!216;UBERON:0000475!4.64e-16!365;UBERON:0000486!9.40e-16!82;UBERON:0000914!1.58e-15!83;UBERON:0002329!1.58e-15!83;UBERON:0003077!1.58e-15!83;UBERON:0003059!1.58e-15!83;UBERON:0007282!1.58e-15!83;UBERON:0009618!1.58e-15!83;UBERON:0007285!1.58e-15!83;UBERON:0000477!3.02e-15!286;UBERON:0003104!8.04e-15!238;UBERON:0009142!8.04e-15!238;UBERON:0004111!8.81e-15!241;UBERON:0004290!3.21e-14!70;UBERON:0004535!9.75e-14!110;UBERON:0001009!1.13e-13!113;UBERON:0000025!2.97e-13!194;UBERON:0001986!4.08e-13!18;UBERON:0004638!4.08e-13!18;UBERON:0004852!4.08e-13!18;UBERON:0001134!1.06e-12!61;UBERON:0002036!1.06e-12!61;UBERON:0003082!1.06e-12!61;UBERON:0000487!2.02e-12!22;UBERON:0006914!5.82e-12!25;UBERON:0002385!1.01e-11!63;UBERON:0001015!1.01e-11!63;UBERON:0000383!1.01e-11!63;UBERON:0001637!2.58e-11!42;UBERON:0003509!2.58e-11!42;UBERON:0004572!2.58e-11!42;UBERON:0000468!4.16e-11!659;UBERON:0000467!3.97e-10!625;UBERON:0000480!7.36e-10!626;UBERON:0002050!1.46e-08!605;UBERON:0005423!1.46e-08!605;UBERON:0000923!2.01e-08!604;UBERON:0005291!2.01e-08!604;UBERON:0006598!2.01e-08!604;UBERON:0002532!2.01e-08!604;UBERON:0004211!2.66e-08!16;UBERON:0001285!2.66e-08!16;UBERON:0007684!2.66e-08!16;UBERON:0003220!2.66e-08!16;UBERON:0004208!2.66e-08!16;UBERON:0000922!3.85e-08!612;UBERON:0000353!3.96e-08!17;UBERON:0006555!4.48e-08!17;UBERON:0005103!4.48e-08!17;UBERON:0000083!4.48e-08!17;UBERON:0009201!4.48e-08!17;UBERON:0004819!4.48e-08!17;UBERON:0006553!4.48e-08!17;UBERON:0003074!4.48e-08!17;UBERON:0003060!4.48e-08!17;UBERON:0004573!1.65e-07!33;UBERON:0004571!1.65e-07!33;UBERON:0003915!2.25e-07!9;UBERON:0004700!2.25e-07!9;UBERON:0001917!2.25e-07!9;UBERON:0001225!3.72e-07!13;UBERON:0008987!3.72e-07!13;UBERON:0000080!5.93e-07!18;UBERON:0002120!5.93e-07!18;UBERON:0004875!5.93e-07!18;UBERON:0005721!5.93e-07!18;UBERON:0005754!5.93e-07!18;UBERON:0007297!5.93e-07!18;UBERON:0001851!6.61e-07!16;UBERON:0004876!8.10e-07!20 | ||
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| ||
|short_description=p4@STK25 | |short_description=p4@STK25 | ||
}} | }} |
Latest revision as of 10:40, 16 September 2015
Short description: | p4@STK25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STK25_5end |
Coexpression cluster: | C843_Alveolar_Mesenchymal_Hepatic_Placental_Renal_Smooth_Fibroblast |
Association with transcript: | 0bp_to_uc002wbm.2_5end |
EntrezGene: | STK25 |
HGNC: | 11404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.05e-29 | 121 |
embryonic cell | 3.71e-28 | 250 |
endothelial cell | 3.49e-20 | 36 |
meso-epithelial cell | 3.95e-20 | 45 |
endothelial cell of vascular tree | 3.43e-18 | 24 |
lining cell | 2.58e-17 | 58 |
barrier cell | 2.58e-17 | 58 |
blood vessel endothelial cell | 3.63e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.63e-14 | 18 |
muscle precursor cell | 1.97e-11 | 58 |
myoblast | 1.97e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.97e-11 | 58 |
muscle cell | 1.06e-10 | 55 |
epithelial cell | 1.24e-10 | 253 |
electrically responsive cell | 3.95e-10 | 61 |
electrically active cell | 3.95e-10 | 61 |
epithelial cell of nephron | 1.32e-09 | 15 |
smooth muscle cell | 2.56e-09 | 43 |
smooth muscle myoblast | 2.56e-09 | 43 |
kidney cell | 1.19e-08 | 17 |
kidney epithelial cell | 1.19e-08 | 17 |
fibroblast | 1.28e-08 | 76 |
kidney cortical cell | 2.21e-08 | 12 |
renal cortical epithelial cell | 2.21e-08 | 12 |
vascular associated smooth muscle cell | 3.87e-08 | 32 |
endothelial cell of artery | 6.62e-08 | 9 |
squamous epithelial cell | 9.90e-07 | 63 |