FFCP PHASE1:Hg19::chr13:108922345..108922413,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:108922345..108922413,+ to FFCP PHASE1:Hg19::chr13:108922345..108922413,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-161bp_to_ENST00000479435_5end | |||
|cluster_id=chr13:108922345..108922413,+ | |||
|description=CAGE_peak_1_at_TNFSF13B_5end | |||
|id=chr13:108922345..108922413,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.62e-47!172;CL:0000566!1.62e-47!172;CL:0000763!2.20e-46!112;CL:0000049!2.20e-46!112;CL:0002032!2.49e-44!165;CL:0000837!2.49e-44!165;CL:0000988!2.43e-43!182;CL:0000738!1.24e-40!140;CL:0000766!4.42e-40!76;CL:0002009!2.72e-37!65;CL:0002194!1.12e-36!63;CL:0000576!1.12e-36!63;CL:0000040!1.12e-36!63;CL:0000559!1.12e-36!63;CL:0000557!1.45e-35!71;CL:0002087!2.15e-33!119;CL:0000839!5.21e-33!70;CL:0002057!3.94e-32!42;CL:0002031!4.52e-31!124;CL:0000860!3.90e-29!45;CL:0000134!6.89e-10!358;CL:0002320!8.56e-09!365;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000451!2.18e-07!10;CL:0000094!3.40e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.28e-31;33!CL:0002057;9.28e-31;33!CL:0000473;2.21e-30;39!CL:0000234;2.21e-30;39!CL:0000576;4.40e-29;48!CL:0000766;2.84e-22;69!CL:0000763;2.06e-17;100!CL:0002087;1.16e-11;104!CL:0000738;7.90e-11;136!CL:0000094;4.87e-09;8!CL:0000988;6.65e-09;177!CL:0000451;3.58e-08;10!CL:0002393;4.28e-07;6!CL:0002397;4.28e-07;6!CL:0000235;5.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.96e-59,108;CL:0000049,1.96e-59,108;CL:0000766,8.45e-55,72;CL:0000037,2.66e-53,168;CL:0002194,7.52e-53,59;CL:0000576,7.52e-53,59;CL:0000040,7.52e-53,59;CL:0000559,7.52e-53,59;CL:0002009,2.71e-52,61;CL:0002032,4.68e-49,161;CL:0000837,4.68e-49,161;CL:0000988,2.20e-48,177;CL:0000473,6.41e-48,48;CL:0000234,6.41e-48,48;CL:0000557,1.75e-47,67;CL:0000738,6.73e-46,136;CL:0000839,1.35e-44,66;CL:0000860,3.16e-42,42;CL:0002057,3.16e-42,42;CL:0002087,1.16e-38,115;CL:0002031,4.36e-33,120;CL:0000134,1.61e-11,354;CL:0002320,1.26e-10,361;CL:0002393,1.09e-09,9;CL:0002397,1.09e-09,9;CL:0000094,4.74e-09,8;CL:0000451,3.64e-08,10;CL:0000219,1.22e-07,386;CL:0000235,5.90e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-30;42!CL:0000049;2.38e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!6.86e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.56e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.04e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.11e-40!102;UBERON:0003061!3.11e-40!102;UBERON:0002193!8.43e-36!112;UBERON:0002371!6.63e-32!80;UBERON:0001474!2.68e-27!86;UBERON:0007023!2.00e-25!115;UBERON:0002405!1.63e-23!115;UBERON:0004765!9.55e-22!101;UBERON:0001434!9.55e-22!101;UBERON:0002204!1.10e-10!167;UBERON:0003081!5.82e-10!216;UBERON:0002384!3.73e-08!375;UBERON:0000178!2.43e-07!15;UBERON:0000179!2.43e-07!15;UBERON:0000463!2.43e-07!15;UBERON:0001049!8.86e-07!57;UBERON:0005068!8.86e-07!57;UBERON:0006241!8.86e-07!57;UBERON:0007135!8.86e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.78e-08;15!UBERON:0000179;4.78e-08;15!UBERON:0000463;4.78e-08;15!UBERON:0002390;9.87e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.97e-51,98;UBERON:0003061,8.97e-51,98;UBERON:0002193,6.47e-46,108;UBERON:0002371,7.73e-42,76;UBERON:0002405,2.71e-38,93;UBERON:0001474,6.86e-37,82;UBERON:0004765,2.28e-31,90;UBERON:0001434,1.76e-29,100;UBERON:0003081,1.80e-18,203;UBERON:0007023,1.56e-17,114;UBERON:0002204,5.15e-14,167;UBERON:0002384,7.96e-10,371;UBERON:0000178,4.79e-08,15;UBERON:0000179,4.79e-08,15;UBERON:0000463,4.79e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74022690387308,0,0,0,0,0,0,0,0,0,22.1598876669059,23.4807685826845,21.6454648612618,26.7487708257255,30.3225224496798,36.3817889792779,0,0,0,0,0,17.6160263600908,39.3336740057633,45.9246784706624,41.8830980481594,22.1676319497525,30.1221109397651,26.272707898687,45.3642504992242,33.2530830446152,53.6110775225074,46.0209493073256,34.1269347058115,36.5453517656222,268.992386821211,176.49472679855,179.017048025659,88.599639949311,58.7391062061282,62.2961838333972,43.1074957552565,26.1989904055532,26.0679241956298,90.6008321417872,69.3206698484362,74.1631065926888,449.917173454681,234.768725020661,331.602855914436,153.230477995892,90.2142507258912,69.7560918875044,170.095346378815,160.095255955002,146.819659020659,487.951999122495,209.918252512912,230.701080444405,98.8674739939888,71.2224404882896,80.0896025841996,80.988943056623,94.311088704466,134.527316065456,36.1966184551386,44.9551690469944,56.0778952057426,0,0,2.66852776159066,3.84057200309856,0.400395987036012,1.14950487990897,1.32208974556972,0,1.1384259382189,1.17447437874188,0.764546456250458,2.64342657158052,2.24203425192614,17.3833495951551,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0,1.69077151827842,0.822189523018381,0,0,0.14828656316206,0,3.1360657141493,0.113309342697566,0.766440987203842,0,1.26509846009751,0.637130828648193,0.651083453856419,0,3.76437797694432,3.07167866770604,4.99722906209383,4.49876778883632,0,0.604820229674197,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.175669571386252,1.37528029272598,0,0,71.0758792103756,75.9205654624805,60.2299561150459,11.4475499666564,30.3157302713468,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.144809087342,147.356500376364,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12801714369232,3.70900393917835,0,0,0,0,0,0,0,3.45547535485173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0.643240938192885,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,34.2241638461482,31.5905757937971,38.9413645196468,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,62.0281281270071,103.96721792645,73.7918788190611,0,0,0,0.579125226670317,0,0,0,2.56139988262505,0.646882724578552,1.92514554419623,0,0,0,0,0,123.586158951285,62.8239064328452,206.378925691146,0,0,0,0.207970861530807,0.178428988797162,0,0,0,2.27407504055985,0,0,0,0,0,0,29.7745957616958,43.1428401637234,25.6146138728266,0,0,0,0.248107807818777,0,0,0,0,0,0,0.462629081407967,0,0.164254312027618,1.03850885836724,0.697262270759755,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0,2.7723022215848,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,78.2320301716423,0,0,0,0,0,0,1.31535265576129,0,0,0,1.54911749049875,0,0,0,0,0.354761064070598,1.68886108238131,1.31717957183961,0,0,0,0,0,2.44773882019626,0,0,0,0,24.8649328523763,28.2915766642679,31.3305952945789,21.440859791201,24.2703741120855,27.2358790700941,29.7017290480963,26.9662559940052,0,0,0,0,0,0,0,6.58611925728295,2.2980644415884,2.32840940996271,10.3879020887858,12.0742786588787,16.8893662484562,9.40079374638139,2.50634477090067,0,27.4605608427326,60.3381124501232,49.3981635720778,109.578204977089,1.84344458585075,5.81557880520281,3.8375302593739,30.2851547873162,4.73290495621912,1.23087398947712,0,0,128.298174629943,0,3.95572084034114,0,1.00299045849731,0,0.47748896947538,0.593929361665277,0,0.994147647766298,2.53204949538923,0.333926115068718,0.16480387422676,0,1.39473591775749,14.919331438682,0,0,4.18488338567636,0,0,0,21.4860395495286,1.28236427328014,64.6604349336737,0,0,2.59750674853184,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.05013945663194,0,0.552896299656123,0.295547618953547,1.09692698576986,0,0,0.538651809526579,0.113942055847001,0,0,0,1.27600463892768,0.732780747214898,5.33034776018635,0,0.156980256395025,1.66211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,2.98578579323551,1.68069372556344,1.83309043480088,0.296521128680622,0,0.208843899010911,2.02203398942031,4.01288823649394,1.87411556580271,0,0,0,0.789168805698781,6.04953580243319,0.61214552326098,9.73073326278715,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,4.36816670605075,0.171986032471617,0.0967563312890851,0,0,0.775912131907355,0,0.451961481561065,0,0.19871461170299,0.823040347426423,0.195551382734803,0,1.49417096317547,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,7.20504346451747,5.7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| 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| ||
|short_description=p1@TNFSF13B | |||
}} | }} |
Latest revision as of 11:06, 16 September 2015
Short description: | p1@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFSF13B_5end |
Coexpression cluster: | NA |
Association with transcript: | -161bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.96e-59 | 108 |
common myeloid progenitor | 1.96e-59 | 108 |
myeloid leukocyte | 8.45e-55 | 72 |
hematopoietic stem cell | 2.66e-53 | 168 |
monopoietic cell | 7.52e-53 | 59 |
monocyte | 7.52e-53 | 59 |
monoblast | 7.52e-53 | 59 |
promonocyte | 7.52e-53 | 59 |
macrophage dendritic cell progenitor | 2.71e-52 | 61 |
hematopoietic oligopotent progenitor cell | 4.68e-49 | 161 |
hematopoietic multipotent progenitor cell | 4.68e-49 | 161 |
hematopoietic cell | 2.20e-48 | 177 |
defensive cell | 6.41e-48 | 48 |
phagocyte | 6.41e-48 | 48 |
granulocyte monocyte progenitor cell | 1.75e-47 | 67 |
leukocyte | 6.73e-46 | 136 |
myeloid lineage restricted progenitor cell | 1.35e-44 | 66 |
classical monocyte | 3.16e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.16e-42 | 42 |
nongranular leukocyte | 1.16e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 4.36e-33 | 120 |
mesenchymal cell | 1.61e-11 | 354 |
connective tissue cell | 1.26e-10 | 361 |
intermediate monocyte | 1.09e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.09e-09 | 9 |
granulocyte | 4.74e-09 | 8 |
dendritic cell | 3.64e-08 | 10 |
motile cell | 1.22e-07 | 386 |
macrophage | 5.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.97e-51 | 98 |
blood island | 8.97e-51 | 98 |
hemolymphoid system | 6.47e-46 | 108 |
bone marrow | 7.73e-42 | 76 |
immune system | 2.71e-38 | 93 |
bone element | 6.86e-37 | 82 |
skeletal element | 2.28e-31 | 90 |
skeletal system | 1.76e-29 | 100 |
lateral plate mesoderm | 1.80e-18 | 203 |
adult organism | 1.56e-17 | 114 |
musculoskeletal system | 5.15e-14 | 167 |
connective tissue | 7.96e-10 | 371 |
blood | 4.79e-08 | 15 |
haemolymphatic fluid | 4.79e-08 | 15 |
organism substance | 4.79e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.04e-07 | 31 |