FFCP PHASE1:Hg19::chr8:133894107..133894124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7038 | |EntrezGene=7038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11764 | |HGNC=11764 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000520769_5end | |association_with_transcript=0bp_to_ENST00000520769_5end | ||
|cluster_id=chr8:133894107..133894124,+ | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_5_at_TG_5end | |description=CAGE_peak_5_at_TG_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002623!1.69e-16!3;CL:0002251!5.34e-11!21;CL:0000622!4.40e-10!5;CL:0000154!1.80e-08!6 | |ontology_enrichment_celltype=CL:0002623!1.69e-16!3;CL:0002251!5.34e-11!21;CL:0000622!4.40e-10!5;CL:0000154!1.80e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.66e-34;3!CL:0000622;6.65e-21;5!CL:0000154;1.33e-17;6!CL:0000150;4.42e-12;9 | |ontology_enrichment_celltype_v019=CL:0002623;4.66e-34;3!CL:0000622;6.65e-21;5!CL:0000154;1.33e-17;6!CL:0000150;4.42e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.66e-34,3;CL:0000622,6.65e-21,5;CL:0000154,1.33e-17,6;CL:0000150,4.42e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.79e-26;1!UBERON:0007123;6.65e-21;5 | |ontology_enrichment_development_v019=UBERON:0008801;9.79e-26;1!UBERON:0007123;6.65e-21;5 | ||
|ontology_enrichment_disease=DOID:1749!3.43e-12!14 | |ontology_enrichment_disease=DOID:1749!3.43e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;9.79e-26;1!DOID:3149;9.79e-26;1!DOID:3451;1.37e-13;2!DOID:4159;1.37e-13;2!DOID:0060122;1.37e-13;2 | |ontology_enrichment_disease_v019=DOID:3151;9.79e-26;1!DOID:3149;9.79e-26;1!DOID:3451;1.37e-13;2!DOID:4159;1.37e-13;2!DOID:0060122;1.37e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001044!8.56e-22!6;UBERON:0003293!8.56e-22!6;UBERON:0003294!8.56e-22!6;UBERON:0010047!8.56e-22!6;UBERON:0000167!8.56e-22!6;UBERON:0000166!3.21e-18!21;UBERON:0003408!4.36e-18!10;UBERON:0000165!2.92e-13!28;UBERON:0000930!2.92e-13!28;UBERON:0000078!4.34e-13!18;UBERON:0000161!1.12e-12!35;UBERON:0000974!1.56e-12!10;UBERON:0001052!5.91e-12!4;UBERON:0000341!1.81e-11!2;UBERON:0004907!1.18e-09!5;UBERON:0001007!2.37e-08!155;UBERON:0001555!2.37e-08!155;UBERON:0007026!2.37e-08!155;UBERON:0004119!2.88e-08!169;UBERON:0000925!2.88e-08!169;UBERON:0006595!2.88e-08!169;UBERON:0001004!1.24e-07!72;UBERON:0006562!3.81e-07!11;UBERON:0001444!4.43e-07!48;UBERON:0000344!8.66e-07!12;UBERON:0002530!8.80e-07!59 | |ontology_enrichment_uberon=UBERON:0001044!8.56e-22!6;UBERON:0003293!8.56e-22!6;UBERON:0003294!8.56e-22!6;UBERON:0010047!8.56e-22!6;UBERON:0000167!8.56e-22!6;UBERON:0000166!3.21e-18!21;UBERON:0003408!4.36e-18!10;UBERON:0000165!2.92e-13!28;UBERON:0000930!2.92e-13!28;UBERON:0000078!4.34e-13!18;UBERON:0000161!1.12e-12!35;UBERON:0000974!1.56e-12!10;UBERON:0001052!5.91e-12!4;UBERON:0000341!1.81e-11!2;UBERON:0004907!1.18e-09!5;UBERON:0001007!2.37e-08!155;UBERON:0001555!2.37e-08!155;UBERON:0007026!2.37e-08!155;UBERON:0004119!2.88e-08!169;UBERON:0000925!2.88e-08!169;UBERON:0006595!2.88e-08!169;UBERON:0001004!1.24e-07!72;UBERON:0006562!3.81e-07!11;UBERON:0001444!4.43e-07!48;UBERON:0000344!8.66e-07!12;UBERON:0002530!8.80e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.18e-37;6!UBERON:0003293;1.18e-37;6!UBERON:0003294;1.18e-37;6!UBERON:0010047;1.18e-37;6!UBERON:0003408;1.18e-37;6!UBERON:0000167;1.18e-37;6!UBERON:0001831;9.79e-26;1!UBERON:0001567;9.79e-26;1!UBERON:0002046;6.65e-21;5!UBERON:0001041;1.26e-16;14!UBERON:0000341;8.28e-14;2!UBERON:0001829;1.37e-13;2!UBERON:0004089;1.37e-13;2!UBERON:0000161;1.91e-12;19!UBERON:0000166;1.91e-12;19!UBERON:0000165;1.17e-08;28!UBERON:0002365;4.02e-08;31!UBERON:0002330;4.02e-08;31!UBERON:0000014;1.92e-07;4!UBERON:0007811;5.68e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0001044;1.18e-37;6!UBERON:0003293;1.18e-37;6!UBERON:0003294;1.18e-37;6!UBERON:0010047;1.18e-37;6!UBERON:0003408;1.18e-37;6!UBERON:0000167;1.18e-37;6!UBERON:0001831;9.79e-26;1!UBERON:0001567;9.79e-26;1!UBERON:0002046;6.65e-21;5!UBERON:0001041;1.26e-16;14!UBERON:0000341;8.28e-14;2!UBERON:0001829;1.37e-13;2!UBERON:0004089;1.37e-13;2!UBERON:0000161;1.91e-12;19!UBERON:0000166;1.91e-12;19!UBERON:0000165;1.17e-08;28!UBERON:0002365;4.02e-08;31!UBERON:0002330;4.02e-08;31!UBERON:0000014;1.92e-07;4!UBERON:0007811;5.68e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.18e-37,6;UBERON:0003293,1.18e-37,6;UBERON:0003294,1.18e-37,6;UBERON:0010047,1.18e-37,6;UBERON:0000167,1.18e-37,6;UBERON:0001831,9.79e-26,1;UBERON:0001567,9.79e-26,1;UBERON:0008801,9.79e-26,1;UBERON:0003408,5.96e-23,10;UBERON:0002046,6.65e-21,5;UBERON:0004117,6.65e-21,5;UBERON:0007689,6.65e-21,5;UBERON:0007123,6.65e-21,5;UBERON:0003091,6.65e-21,5;UBERON:0000341,8.28e-14,2;UBERON:0001829,1.37e-13,2;UBERON:0004089,1.37e-13,2;UBERON:0000166,7.66e-11,22;UBERON:0002530,8.72e-11,59;UBERON:0009722,4.62e-10,11;UBERON:0007690,4.62e-10,11;UBERON:0000165,2.21e-08,29;UBERON:0000930,2.21e-08,29;UBERON:0002365,7.02e-08,31;UBERON:0002330,7.02e-08,31;UBERON:0000014,2.04e-07,4;UBERON:0000161,7.22e-07,36;UBERON:0000153,7.88e-07,62;UBERON:0007811,7.88e-07,62 | |||
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|short_description=p5@TG | |short_description=p5@TG | ||
}} | }} |
Latest revision as of 11:54, 16 September 2015
Short description: | p5@TG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TG_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 0bp_to_ENST00000520769_5end |
EntrezGene: | TG |
HGNC: | 11764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.66e-34 | 3 |
acinar cell | 6.65e-21 | 5 |
protein secreting cell | 1.33e-17 | 6 |
glandular epithelial cell | 4.42e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.18e-37 | 6 |
gland of oral region | 1.18e-37 | 6 |
gland of foregut | 1.18e-37 | 6 |
oral gland | 1.18e-37 | 6 |
oral cavity | 1.18e-37 | 6 |
parotid gland | 9.79e-26 | 1 |
cheek | 9.79e-26 | 1 |
parotid gland primordium | 9.79e-26 | 1 |
gland of gut | 5.96e-23 | 10 |
thyroid gland | 6.65e-21 | 5 |
pharyngeal pouch | 6.65e-21 | 5 |
thyroid diverticulum | 6.65e-21 | 5 |
pharyngeal pouch 2 | 6.65e-21 | 5 |
thyroid primordium | 6.65e-21 | 5 |
throat | 8.28e-14 | 2 |
major salivary gland | 1.37e-13 | 2 |
midface | 1.37e-13 | 2 |
oral opening | 7.66e-11 | 22 |
gland | 8.72e-11 | 59 |
entire pharyngeal arch endoderm | 4.62e-10 | 11 |
early pharyngeal endoderm | 4.62e-10 | 11 |
mouth | 2.21e-08 | 29 |
stomodeum | 2.21e-08 | 29 |
exocrine gland | 7.02e-08 | 31 |
exocrine system | 7.02e-08 | 31 |
zone of skin | 2.04e-07 | 4 |
orifice | 7.22e-07 | 36 |
anterior region of body | 7.88e-07 | 62 |
craniocervical region | 7.88e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.26e-25 | 1 |
keratoacanthoma | 1.26e-25 | 1 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |