FFCP PHASE1:Hg19::chr11:124767043..124767111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54538 | |EntrezGene=54538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17985 | |HGNC=17985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-301bp_to_ENST00000532300_5end | |association_with_transcript=-301bp_to_ENST00000532300_5end | ||
|cluster_id=chr11:124767043..124767111,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_2_at_ROBO4_5end | |description=CAGE_peak_2_at_ROBO4_5end | ||
|id=chr11:124767043..124767111,- | |id=chr11:124767043..124767111,- | ||
|ontology_enrichment_celltype=CL:0002139!4.60e-26!24;CL:0000115!3.21e-23!35;CL:0000071!7.50e-20!18;CL:0002546!7.50e-20!18;CL:0002078!6.94e-18!44;CL:0000213!4.08e-17!57;CL:0000215!4.08e-17!57;CL:0000222!8.69e-12!119;CL:1000413!7.66e-11!9;CL:0005020!9.31e-08!6;CL:0002138!9.31e-08!6;CL:0005022!9.31e-08!6;CL:0002544!9.51e-08!6;CL:0002543!2.22e-07!6;CL:0000188!6.46e-07!9 | |ontology_enrichment_celltype=CL:0002139!4.60e-26!24;CL:0000115!3.21e-23!35;CL:0000071!7.50e-20!18;CL:0002546!7.50e-20!18;CL:0002078!6.94e-18!44;CL:0000213!4.08e-17!57;CL:0000215!4.08e-17!57;CL:0000222!8.69e-12!119;CL:1000413!7.66e-11!9;CL:0005020!9.31e-08!6;CL:0002138!9.31e-08!6;CL:0005022!9.31e-08!6;CL:0002544!9.51e-08!6;CL:0002543!2.22e-07!6;CL:0000188!6.46e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.85e-60;24!CL:0000115;6.52e-51;36!CL:0000071;1.86e-45;18!CL:0002078;7.89e-30;45!CL:1000413;9.77e-24;9!CL:0000213;5.02e-21;58!CL:0000215;5.02e-21;58!CL:0002138;2.23e-16;6!CL:0002544;2.44e-16;6!CL:0002543;1.62e-15;6!CL:0000056;2.24e-10;4!CL:0002144;1.86e-09;3!CL:0002188;1.14e-08;5!CL:0000515;2.61e-08;3!CL:0002618;2.88e-08;3!CL:0002582;1.14e-07;3!CL:0000076;1.45e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.76e-60,36;CL:0002139,2.17e-60,24;CL:0002078,1.69e-46,45;CL:0000071,2.12e-45,18;CL:0002546,2.12e-45,18;CL:0000213,5.42e-34,58;CL:0000215,5.42e-34,58;CL:1000413,9.84e-24,9;CL:0000222,1.93e-22,121;CL:0005020,2.30e-16,6;CL:0002138,2.30e-16,6;CL:0005022,2.30e-16,6;CL:0002544,2.42e-16,6;CL:0002543,1.82e-15,6;CL:0002321,1.36e-12,250;CL:0000076,9.21e-12,63;CL:0000515,1.94e-10,4;CL:0002144,1.86e-09,3;CL:0002188,1.32e-08,5;CL:0002618,3.19e-08,3;CL:0002582,8.06e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.86e-45;18!CL:0005022;2.23e-16;6!CL:0000515;2.24e-10;4!CL:0000222;5.27e-09;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.50e-20!18;UBERON:0004638!7.50e-20!18;UBERON:0004852!7.50e-20!18;UBERON:0000487!8.42e-15!22;UBERON:0000055!2.31e-14!69;UBERON:0006914!2.96e-13!25;UBERON:0000119!3.85e-13!312;UBERON:0000483!1.42e-12!309;UBERON:0004872!3.73e-11!84;UBERON:0003915!7.66e-11!9;UBERON:0004700!7.66e-11!9;UBERON:0001917!7.66e-11!9;UBERON:0002049!9.33e-11!79;UBERON:0007798!9.33e-11!79;UBERON:0007023!1.02e-10!115;UBERON:0001981!2.00e-10!60;UBERON:0007500!2.00e-10!60;UBERON:0004537!2.00e-10!60;UBERON:0006965!2.00e-10!60;UBERON:0004111!2.49e-10!241;UBERON:0000477!1.83e-08!286;UBERON:0000025!2.04e-08!194;UBERON:0001009!4.34e-08!113;UBERON:0004535!9.65e-08!110;UBERON:0001473!3.33e-07!8;UBERON:0004536!3.33e-07!8;UBERON:0006558!3.33e-07!8 | |ontology_enrichment_uberon=UBERON:0001986!7.50e-20!18;UBERON:0004638!7.50e-20!18;UBERON:0004852!7.50e-20!18;UBERON:0000487!8.42e-15!22;UBERON:0000055!2.31e-14!69;UBERON:0006914!2.96e-13!25;UBERON:0000119!3.85e-13!312;UBERON:0000483!1.42e-12!309;UBERON:0004872!3.73e-11!84;UBERON:0003915!7.66e-11!9;UBERON:0004700!7.66e-11!9;UBERON:0001917!7.66e-11!9;UBERON:0002049!9.33e-11!79;UBERON:0007798!9.33e-11!79;UBERON:0007023!1.02e-10!115;UBERON:0001981!2.00e-10!60;UBERON:0007500!2.00e-10!60;UBERON:0004537!2.00e-10!60;UBERON:0006965!2.00e-10!60;UBERON:0004111!2.49e-10!241;UBERON:0000477!1.83e-08!286;UBERON:0000025!2.04e-08!194;UBERON:0001009!4.34e-08!113;UBERON:0004535!9.65e-08!110;UBERON:0001473!3.33e-07!8;UBERON:0004536!3.33e-07!8;UBERON:0006558!3.33e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.86e-45;18!UBERON:0001986;1.86e-45;18!UBERON:0004852;1.86e-45;18!UBERON:0000487;3.45e-36;22!UBERON:0006914;3.44e-31;25!UBERON:0000490;6.08e-25;33!UBERON:0003915;9.77e-24;9!UBERON:0004700;9.77e-24;9!UBERON:0001917;9.77e-24;9!UBERON:0000055;4.71e-17;65!UBERON:0001473;9.25e-16;8!UBERON:0004536;9.25e-16;8!UBERON:0006558;9.25e-16;8!UBERON:0002465;2.35e-12;10!UBERON:0007500;5.80e-12;56!UBERON:0001981;5.80e-12;56!UBERON:0004537;5.80e-12;56!UBERON:0002049;6.65e-11;75!UBERON:0007798;6.65e-11;75!UBERON:0001638;4.61e-10;9!UBERON:0003920;4.61e-10;9!UBERON:0004582;4.61e-10;9!UBERON:0010523;1.86e-09;3!UBERON:0001915;1.86e-09;3!UBERON:0001982;1.86e-09;3!UBERON:0003914;3.58e-09;74!UBERON:0000947;2.39e-08;21!UBERON:0010191;2.39e-08;21!UBERON:0004535;6.09e-08;109!UBERON:0000025;1.78e-07;93!UBERON:0001637;2.96e-07;42!UBERON:0003509;2.96e-07;42!UBERON:0004572;2.96e-07;42!UBERON:0001009;3.38e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.12e-45,18;UBERON:0001986,2.12e-45,18;UBERON:0004852,2.12e-45,18;UBERON:0000487,3.83e-36,22;UBERON:0006914,3.77e-31,25;UBERON:0000055,4.90e-31,68;UBERON:0002049,7.69e-26,78;UBERON:0007798,7.69e-26,78;UBERON:0003915,9.84e-24,9;UBERON:0004700,9.84e-24,9;UBERON:0001917,9.84e-24,9;UBERON:0007500,5.49e-21,59;UBERON:0001981,5.49e-21,59;UBERON:0004537,5.49e-21,59;UBERON:0006965,5.49e-21,59;UBERON:0004535,1.15e-19,109;UBERON:0001009,7.07e-19,112;UBERON:0004872,3.83e-18,83;UBERON:0001473,8.05e-16,8;UBERON:0004536,8.05e-16,8;UBERON:0006558,8.05e-16,8;UBERON:0003914,7.73e-14,117;UBERON:0002465,2.10e-12,10;UBERON:0000490,1.04e-11,148;UBERON:0001638,4.97e-10,9;UBERON:0003920,4.97e-10,9;UBERON:0004582,4.97e-10,9;UBERON:0010523,1.86e-09,3;UBERON:0001915,1.86e-09,3;UBERON:0001982,1.86e-09,3;UBERON:0000119,1.49e-08,309;UBERON:0000947,2.80e-08,21;UBERON:0010191,2.80e-08,21;UBERON:0000483,3.40e-08,306;UBERON:0004111,9.08e-08,240;UBERON:0001637,1.89e-07,42;UBERON:0003509,1.89e-07,42;UBERON:0004572,1.89e-07,42 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.816002764977012,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,11.5282196272689,12.9035189265919,12.4970580578734,19.7857779673403,14.6824802673467,8.52865930014209,22.5714563859755,13.9545049951438,14.9421830328418,10.0416183829401,31.0178574174043,30.4108842287405,41.0024256680925,7.35326160691737,10.5318453224629,3.48268940307911,4.26605807989723,3.26573293401634,18.397996495906,9.49265659568129,7.32806975721629,0,0,0,0,0.633152558322899,0.662045904066094,2.29469296599051,1.06400514659507,0,0,0,0,0.808264032418128,0.653847612453835,0,0,0.468642863667593,0,3.4228309292667,0.597794722207204,0.352303495931295,0,0.140450806702248,0,2.21101771161182,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0.673344455816265,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,1.05965950579781,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0.643240938192885,5.52539685409922,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,8.41450642820675,0.4115740113314,0,0,0,0,0,0,0,2.96325770603289,2.24803506515239,0.502644862058154,0,0,0,1.44331342025273,0,0,17.9014395223732,9.25971025153221,9.13219930726072,0,0,0,0,0,0,0,0.283550194484773,0,0,4.60059214998253,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0,0.5867062865676,0,3.57656445851882,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.199945982364114,0,0,0,0,0,2.85273810081437,2.75084482668401,4.31500277355805,7.69962141931551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.157702415033935,2.57711112983969,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,1.37257369524342,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,2.46735510084249,0.532685175939381,1.31403449622095,6.75030757938707,1.85936605535935,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,6.8240030442538,15.1383397696099,1.0795795805107,18.5072703228347,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,2.12675580242668,0.308097234229289,0.767518373630648,1.24052915236078,0.322260734604821,0.145016693914229,0.511359764496605,1.24644849905432,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0.511795582622668,0,2.86382923133343,0,0.899362287916574,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,5.09838797021595,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.52418000472609,1.37588825977293,0,0,0,0.678923115418936,0,0,0.274083849293502,0.19871461170299,0.253243183823515,0,0,0,0,0,0,0,0,0.124252535565433,0,2.98989253361951,3.97490815986866,0.101998217636322,0,0,0.273810757783986,0,0,0,0.837847203816763,0,1.43574604915363,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.425246896606173,0,0.551639951094387,0.0524545881349981,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,1.19730191562487,0,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0.854299300541557,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,2.0055191521816,0.919036730290385,0.327872630709804,0,0,0.122026264901963,0,0,0,0.683060432355218,0,0,0,0,0,0,0,3.73137007217185,0,0.554805861502613,0.189403005275089,0.251567901752575,0,1.14420034198462,4.08323494160745,0,1.47855149989634,0.796483835818512,0.449803112163605,0.155262956876259,0.829412415681711,1.06336685823198,0.521745061811734,0.751288044986092,0,0.406870733204662,0.545545977607678,0.966695013382396,0,0.796191777397232,8.80061082258938,1.03018711554838,0,0,0.192619830407303,0,0,0.226705925512272,0.926089897295336,0,0.179088841081487,0.926404341482917,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0,0.256916900385838,0,0,0,0,0.622415272177961,0.645902582527404,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0.171488009437418,0.339848664884159,0.263091094251396,0,0,0,0.3142311798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| ||
|short_description=p2@ROBO4 | |short_description=p2@ROBO4 | ||
}} | }} |
Latest revision as of 12:14, 16 September 2015
Short description: | p2@ROBO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROBO4_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -301bp_to_ENST00000532300_5end |
EntrezGene: | ROBO4 |
HGNC: | 17985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.76e-60 | 36 |
endothelial cell of vascular tree | 2.17e-60 | 24 |
meso-epithelial cell | 1.69e-46 | 45 |
blood vessel endothelial cell | 2.12e-45 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.12e-45 | 18 |
lining cell | 5.42e-34 | 58 |
barrier cell | 5.42e-34 | 58 |
endothelial cell of artery | 9.84e-24 | 9 |
mesodermal cell | 1.93e-22 | 121 |
lymphangioblast | 2.30e-16 | 6 |
endothelial cell of lymphatic vessel | 2.30e-16 | 6 |
vascular lymphangioblast | 2.30e-16 | 6 |
aortic endothelial cell | 2.42e-16 | 6 |
vein endothelial cell | 1.82e-15 | 6 |
embryonic cell | 1.36e-12 | 250 |
squamous epithelial cell | 9.21e-12 | 63 |
skeletal muscle myoblast | 1.94e-10 | 4 |
capillary endothelial cell | 1.86e-09 | 3 |
glomerular endothelial cell | 1.32e-08 | 5 |
endothelial cell of umbilical vein | 3.19e-08 | 3 |
visceral preadipocyte | 8.06e-08 | 3 |