FFCP PHASE2:Hg19::chr3:16555238..16555305,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23180 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30278 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30278 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q14699,Q8N5I0 | ||
|association_with_transcript=-16bp_to_NM_015150,uc003cay.2_5end | |association_with_transcript=-16bp_to_NM_015150,uc003cay.2_5end | ||
|cluster_id=chr3:16555238..16555305,- | |cluster_id=chr3:16555238..16555305,- |
Latest revision as of 13:14, 16 September 2015
Short description: | p2@RFTN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFTN1_5end |
Coexpression cluster: | C4302_migratory_lymphoma_mycosis_immature_B_Adipocyte_Hair |
Association with transcript: | -16bp_to_NM_015150, uc003cay.2_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | Q14699Q8N5I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RFTN1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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multi fate stem cell | 3.48e-18 | 427 |
somatic stem cell | 8.34e-17 | 433 |
connective tissue cell | 4.31e-16 | 361 |
stem cell | 1.03e-15 | 441 |
mesenchymal cell | 1.09e-14 | 354 |
motile cell | 4.61e-12 | 386 |
leukocyte | 6.71e-09 | 136 |
lymphoid lineage restricted progenitor cell | 1.20e-08 | 52 |
lymphocyte | 2.83e-08 | 53 |
common lymphoid progenitor | 2.83e-08 | 53 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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connective tissue | 2.98e-15 | 371 |
tissue | 5.08e-08 | 773 |
Showing 1 to 2 of 2 entries