FFCP PHASE1:Hg19::chr10:116853091..116853131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26033 | |EntrezGene=26033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29063 | |HGNC=29063 | ||
|TSSclassifier=strong | |||
|UniProt=F5H129,E9PL90,Q5VV63 | |UniProt=F5H129,E9PL90,Q5VV63 | ||
|association_with_transcript=0bp_to_ENST00000485327,ENST00000526946,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | |association_with_transcript=0bp_to_ENST00000485327,ENST00000526946,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | ||
|cluster_id=chr10:116853091..116853131,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_ATRNL1_5end | |description=CAGE_peak_1_at_ATRNL1_5end | ||
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|ontology_enrichment_celltype=CL:0000133!5.44e-08!59 | |ontology_enrichment_celltype=CL:0000133!5.44e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000147;6.45e-08;14!CL:0000540;5.62e-07;6!CL:0000404;5.62e-07;6!CL:0002321;9.50e-07;15 | |ontology_enrichment_celltype_v019=CL:0000147;6.45e-08;14!CL:0000540;5.62e-07;6!CL:0000404;5.62e-07;6!CL:0002321;9.50e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,4.37e-08,14;CL:0000148,5.44e-07,10;CL:0000541,5.44e-07,10;CL:0000540,6.79e-07,6;CL:0000031,6.79e-07,6;CL:0000404,6.79e-07,6;CL:0000133,8.25e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-12;82!CL:0000031;5.62e-07;6 | |ontology_enrichment_development_v019=UBERON:0006601;4.15e-12;82!CL:0000031;5.62e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-31;41!UBERON:0001890;2.16e-31;41!UBERON:0001869;3.78e-31;32!UBERON:0001893;8.11e-31;34!UBERON:0003528;9.60e-31;34!UBERON:0002020;9.60e-31;34!UBERON:0002791;1.52e-30;32!UBERON:0002619;8.49e-30;22!UBERON:0000073;1.69e-28;53!UBERON:0002616;1.69e-28;53!UBERON:0001950;1.18e-27;20!UBERON:0000956;2.99e-27;25!UBERON:0000203;2.99e-27;25!UBERON:0000955;5.16e-22;68!UBERON:0001017;1.05e-21;75!UBERON:0001016;2.95e-19;83!UBERON:0002420;1.65e-10;9!UBERON:0007245;1.65e-10;9!UBERON:0010009;1.65e-10;9!UBERON:0010011;1.65e-10;9!UBERON:0000454;1.65e-10;9!UBERON:0000125;4.32e-10;9!UBERON:0002308;4.32e-10;9!UBERON:0001871;9.26e-10;6!UBERON:0001894;3.13e-09;7!UBERON:0000200;3.24e-09;6!UBERON:0011216;7.79e-09;132!UBERON:0007023;8.83e-09;114!UBERON:0000922;2.38e-08;49!UBERON:0004733;3.46e-08;12!UBERON:0002028;3.46e-08;12!UBERON:0009663;3.55e-08;7!UBERON:0001872;4.87e-08;5!UBERON:0002021;6.52e-08;5!UBERON:0004732;2.29e-07;13!UBERON:0000349;2.47e-07;5!UBERON:0002298;4.32e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-31;41!UBERON:0001890;2.16e-31;41!UBERON:0001869;3.78e-31;32!UBERON:0001893;8.11e-31;34!UBERON:0003528;9.60e-31;34!UBERON:0002020;9.60e-31;34!UBERON:0002791;1.52e-30;32!UBERON:0002619;8.49e-30;22!UBERON:0000073;1.69e-28;53!UBERON:0002616;1.69e-28;53!UBERON:0001950;1.18e-27;20!UBERON:0000956;2.99e-27;25!UBERON:0000203;2.99e-27;25!UBERON:0000955;5.16e-22;68!UBERON:0001017;1.05e-21;75!UBERON:0001016;2.95e-19;83!UBERON:0002420;1.65e-10;9!UBERON:0007245;1.65e-10;9!UBERON:0010009;1.65e-10;9!UBERON:0010011;1.65e-10;9!UBERON:0000454;1.65e-10;9!UBERON:0000125;4.32e-10;9!UBERON:0002308;4.32e-10;9!UBERON:0001871;9.26e-10;6!UBERON:0001894;3.13e-09;7!UBERON:0000200;3.24e-09;6!UBERON:0011216;7.79e-09;132!UBERON:0007023;8.83e-09;114!UBERON:0000922;2.38e-08;49!UBERON:0004733;3.46e-08;12!UBERON:0002028;3.46e-08;12!UBERON:0009663;3.55e-08;7!UBERON:0001872;4.87e-08;5!UBERON:0002021;6.52e-08;5!UBERON:0004732;2.29e-07;13!UBERON:0000349;2.47e-07;5!UBERON:0002298;4.32e-07;6 | ||
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| ||
|short_description=p1@ATRNL1 | |short_description=p1@ATRNL1 | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p1@ATRNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATRNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000485327, ENST00000526946, ENST00000529665, NM_207303, uc001lce.2, uc001lcf.2, uc001lcg.2, uc009xyq.2_5end |
EntrezGene: | ATRNL1 |
HGNC: | 29063 |
UniProt: | F5H129E9PL90Q5VV63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 4.37e-08 | 14 |
melanocyte | 5.44e-07 | 10 |
melanoblast | 5.44e-07 | 10 |
neuron | 6.79e-07 | 6 |
neuroblast | 6.79e-07 | 6 |
electrically signaling cell | 6.79e-07 | 6 |
neurectodermal cell | 8.25e-07 | 59 |