FFCP PHASE1:Hg19::chr2:26257526..26257548,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:26257526..26257548,+
|short_description=p6@RAB10
|description=CAGE_peak_6_at_RAB10_5end
|association_with_transcript=0bp_to_AF091032_5end
|EntrezGene=1089...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10890 | |EntrezGene=10890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9759 | |HGNC=9759 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL28 | |UniProt=Q9UL28 | ||
|association_with_transcript=0bp_to_AF091032_5end | |||
|cluster_id=chr2:26257526..26257548,+ | |||
|description=CAGE_peak_6_at_RAB10_5end | |||
|id=chr2:26257526..26257548,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.79e-11!65;CL:0002194!4.03e-11!63;CL:0000576!4.03e-11!63;CL:0000040!4.03e-11!63;CL:0000559!4.03e-11!63;CL:0002057!1.39e-10!42;CL:0000860!9.70e-10!45;CL:0000839!5.77e-09!70;CL:0000557!8.18e-09!71;CL:0000766!4.43e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.48e-11;39!CL:0000234;2.48e-11;39!CL:0000860;8.28e-11;33!CL:0002057;8.28e-11;33!CL:0000576;8.47e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0002194,3.33e-14,59;CL:0000576,3.33e-14,59;CL:0000040,3.33e-14,59;CL:0000559,3.33e-14,59;CL:0002009,3.35e-14,61;CL:0000860,3.02e-13,42;CL:0002057,3.02e-13,42;CL:0000766,3.45e-12,72;CL:0000557,6.93e-12,67;CL:0000839,1.72e-11,66;CL:0000763,5.05e-08,108;CL:0000049,5.05e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.93e-09;42 | |||
|ontology_enrichment_disease=DOID:14566!4.23e-09!239;DOID:162!1.17e-08!235;DOID:0050687!1.68e-08!143;DOID:305!1.63e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.07e-09!80;UBERON:0001474!7.32e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-14,76;UBERON:0001474,2.49e-12,82;UBERON:0002390,1.32e-11,98;UBERON:0003061,1.32e-11,98;UBERON:0002405,4.22e-11,93;UBERON:0004765,9.13e-11,90;UBERON:0002193,2.34e-10,108;UBERON:0001434,6.21e-09,100 | |||
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|short_description=p6@RAB10 | |||
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Latest revision as of 14:38, 16 September 2015
Short description: | p6@RAB10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF091032_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | Q9UL28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
monopoietic cell | 3.33e-14 | 59 |
monocyte | 3.33e-14 | 59 |
monoblast | 3.33e-14 | 59 |
promonocyte | 3.33e-14 | 59 |
macrophage dendritic cell progenitor | 3.35e-14 | 61 |
classical monocyte | 3.02e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-13 | 42 |
myeloid leukocyte | 3.45e-12 | 72 |
granulocyte monocyte progenitor cell | 6.93e-12 | 67 |
myeloid lineage restricted progenitor cell | 1.72e-11 | 66 |
myeloid cell | 5.05e-08 | 108 |
common myeloid progenitor | 5.05e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-14 | 76 |
bone element | 2.49e-12 | 82 |
hematopoietic system | 1.32e-11 | 98 |
blood island | 1.32e-11 | 98 |
immune system | 4.22e-11 | 93 |
skeletal element | 9.13e-11 | 90 |
hemolymphoid system | 2.34e-10 | 108 |
skeletal system | 6.21e-09 | 100 |