FFCP PHASE1:Hg19::chr6:160114515..160114568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-155bp_to_ENST00000538183_5end | |association_with_transcript=-155bp_to_ENST00000538183_5end | ||
|cluster_id=chr6:160114515..160114568,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_5_at_SOD2_5end | |description=CAGE_peak_5_at_SOD2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.81e-17!42;CL:0000860!3.49e-15!45;CL:0000766!4.35e-12!76;CL:0002194!3.32e-11!63;CL:0000576!3.32e-11!63;CL:0000040!3.32e-11!63;CL:0000559!3.32e-11!63;CL:0002009!1.37e-10!65;CL:0000839!1.20e-08!70;CL:0000557!3.53e-08!71 | |ontology_enrichment_celltype=CL:0002057!1.81e-17!42;CL:0000860!3.49e-15!45;CL:0000766!4.35e-12!76;CL:0002194!3.32e-11!63;CL:0000576!3.32e-11!63;CL:0000040!3.32e-11!63;CL:0000559!3.32e-11!63;CL:0002009!1.37e-10!65;CL:0000839!1.20e-08!70;CL:0000557!3.53e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-16;33!CL:0002057;2.32e-16;33!CL:0000473;7.46e-14;39!CL:0000234;7.46e-14;39!CL:0000576;2.56e-09;48!CL:0000766;2.87e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.32e-16;33!CL:0002057;2.32e-16;33!CL:0000473;7.46e-14;39!CL:0000234;7.46e-14;39!CL:0000576;2.56e-09;48!CL:0000766;2.87e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.65e-18,48;CL:0000234,6.65e-18,48;CL:0000860,1.69e-17,42;CL:0002057,1.69e-17,42;CL:0000766,4.44e-13,72;CL:0002194,2.87e-12,59;CL:0000576,2.87e-12,59;CL:0000040,2.87e-12,59;CL:0000559,2.87e-12,59;CL:0002009,1.66e-11,61;CL:0000839,1.96e-09,66;CL:0000557,7.24e-09,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-13;42 | |ontology_enrichment_development_v019=CL:0002057;2.06e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-24!115;UBERON:0000468!1.10e-15!659;UBERON:0000467!1.61e-14!625;UBERON:0000480!3.52e-14!626;UBERON:0000922!4.81e-14!612;UBERON:0002050!6.97e-13!605;UBERON:0005423!6.97e-13!605;UBERON:0000923!7.79e-13!604;UBERON:0005291!7.79e-13!604;UBERON:0006598!7.79e-13!604;UBERON:0002532!7.79e-13!604;UBERON:0001049!5.12e-09!57;UBERON:0005068!5.12e-09!57;UBERON:0006241!5.12e-09!57;UBERON:0007135!5.12e-09!57;UBERON:0005743!1.27e-08!86;UBERON:0001017!1.54e-08!82;UBERON:0002193!2.60e-08!112;UBERON:0000062!7.53e-08!511;UBERON:0002616!8.23e-08!59;UBERON:0003075!1.71e-07!86;UBERON:0007284!1.71e-07!86;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0002405!2.73e-07!115;UBERON:0002020!3.48e-07!34;UBERON:0003528!3.48e-07!34;UBERON:0002390!3.75e-07!102;UBERON:0003061!3.75e-07!102;UBERON:0002204!4.14e-07!167;UBERON:0001893!5.22e-07!34;UBERON:0001869!7.88e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.49e-24!115;UBERON:0000468!1.10e-15!659;UBERON:0000467!1.61e-14!625;UBERON:0000480!3.52e-14!626;UBERON:0000922!4.81e-14!612;UBERON:0002050!6.97e-13!605;UBERON:0005423!6.97e-13!605;UBERON:0000923!7.79e-13!604;UBERON:0005291!7.79e-13!604;UBERON:0006598!7.79e-13!604;UBERON:0002532!7.79e-13!604;UBERON:0001049!5.12e-09!57;UBERON:0005068!5.12e-09!57;UBERON:0006241!5.12e-09!57;UBERON:0007135!5.12e-09!57;UBERON:0005743!1.27e-08!86;UBERON:0001017!1.54e-08!82;UBERON:0002193!2.60e-08!112;UBERON:0000062!7.53e-08!511;UBERON:0002616!8.23e-08!59;UBERON:0003075!1.71e-07!86;UBERON:0007284!1.71e-07!86;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0002405!2.73e-07!115;UBERON:0002020!3.48e-07!34;UBERON:0003528!3.48e-07!34;UBERON:0002390!3.75e-07!102;UBERON:0003061!3.75e-07!102;UBERON:0002204!4.14e-07!167;UBERON:0001893!5.22e-07!34;UBERON:0001869!7.88e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.45e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002619;8.45e-07;22 | ||
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| ||
|short_description=p5@SOD2 | |short_description=p5@SOD2 | ||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p5@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -155bp_to_ENST00000538183_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.65e-18 | 48 |
phagocyte | 6.65e-18 | 48 |
classical monocyte | 1.69e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-17 | 42 |
myeloid leukocyte | 4.44e-13 | 72 |
monopoietic cell | 2.87e-12 | 59 |
monocyte | 2.87e-12 | 59 |
monoblast | 2.87e-12 | 59 |
promonocyte | 2.87e-12 | 59 |
macrophage dendritic cell progenitor | 1.66e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.96e-09 | 66 |
granulocyte monocyte progenitor cell | 7.24e-09 | 67 |