FFCP PHASE1:Hg19::chr2:26467253..26467283,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3032 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4803 | |||
|TSSclassifier=strong | |||
|UniProt=P55084 | |||
|association_with_transcript=-332bp_to_NM_000183,uc002rgz.2,uc002rha.2,uc010yku.1,uc010ykv.1,uc010ykw.1_5end | |||
|cluster_id=chr2:26467253..26467283,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_HADHB_5end | |||
|id=chr2:26467253..26467283,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.98e-44!112;CL:0000049!1.98e-44!112;CL:0000557!4.99e-44!71;CL:0000766!7.72e-44!76;CL:0000839!2.00e-41!70;CL:0002194!2.64e-40!63;CL:0000576!2.64e-40!63;CL:0000040!2.64e-40!63;CL:0000559!2.64e-40!63;CL:0002032!3.99e-40!165;CL:0000837!3.99e-40!165;CL:0002009!5.41e-40!65;CL:0000037!8.73e-40!172;CL:0000566!8.73e-40!172;CL:0000988!2.51e-38!182;CL:0002057!3.39e-35!42;CL:0000738!3.89e-35!140;CL:0002031!3.36e-33!124;CL:0000860!2.59e-32!45;CL:0002087!4.42e-32!119;CL:0000134!2.07e-10!358;CL:0002320!5.39e-10!365;CL:0002393!6.04e-08!9;CL:0002397!6.04e-08!9;CL:0000219!8.38e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.33e-76;33!CL:0002057;9.33e-76;33!CL:0000473;1.28e-69;39!CL:0000234;1.28e-69;39!CL:0000576;3.19e-55;48!CL:0000766;3.43e-44;69!CL:0000763;1.31e-26;100!CL:0000738;5.57e-15;136!CL:0002087;1.18e-13;104!CL:0000988;1.06e-10;177!CL:0000235;4.83e-10;6!CL:0000875;9.09e-08;3!CL:0000767;9.09e-08;3!CL:0002396;9.09e-08;3!CL:0000840;2.95e-07;5!CL:0000219;4.25e-07;193!CL:0002393;6.56e-07;6!CL:0002397;6.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.23e-105,67;CL:0000766,6.80e-105,72;CL:0000473,2.78e-103,48;CL:0000234,2.78e-103,48;CL:0002009,1.42e-100,61;CL:0002194,4.36e-100,59;CL:0000576,4.36e-100,59;CL:0000040,4.36e-100,59;CL:0000559,4.36e-100,59;CL:0000839,2.17e-99,66;CL:0000860,8.44e-95,42;CL:0002057,8.44e-95,42;CL:0000763,2.19e-87,108;CL:0000049,2.19e-87,108;CL:0002032,3.30e-61,161;CL:0000837,3.30e-61,161;CL:0000738,3.48e-61,136;CL:0000037,5.14e-60,168;CL:0002031,3.06e-59,120;CL:0000988,3.90e-56,177;CL:0002087,1.87e-55,115;CL:0000134,1.10e-21,354;CL:0002320,6.14e-21,361;CL:0000219,2.62e-18,386;CL:0000034,2.52e-16,441;CL:0000723,2.17e-15,433;CL:0000048,4.28e-15,427;CL:0002393,2.96e-13,9;CL:0002397,2.96e-13,9;CL:0000235,7.86e-10,6;CL:0000875,2.13e-08,3;CL:0002396,2.13e-08,3;CL:0000767,6.75e-08,3;CL:0000840,2.09e-07,5;CL:0001029,2.09e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-67;42!CL:0000049;2.14e-24;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.55e-38!80;UBERON:0002390!3.96e-36!102;UBERON:0003061!3.96e-36!102;UBERON:0002193!6.36e-35!112;UBERON:0001474!1.01e-34!86;UBERON:0004765!7.82e-30!101;UBERON:0001434!7.82e-30!101;UBERON:0002405!6.60e-28!115;UBERON:0003081!7.63e-17!216;UBERON:0002204!1.77e-13!167;UBERON:0002384!3.05e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-91,76;UBERON:0001474,7.49e-84,82;UBERON:0002405,2.31e-78,93;UBERON:0002390,1.67e-76,98;UBERON:0003061,1.67e-76,98;UBERON:0004765,3.58e-75,90;UBERON:0002193,4.44e-68,108;UBERON:0001434,2.94e-66,100;UBERON:0003081,8.27e-35,203;UBERON:0002204,5.88e-34,167;UBERON:0002384,8.60e-21,371;UBERON:0000926,6.00e-17,315;UBERON:0004120,6.00e-17,315;UBERON:0006603,6.00e-17,315 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,1.57345710739562,1.53531759238885,1.23852898652861,0,0,0.369754010166788,0.0774672005803016,0.426507697462265,0.880801318004542,2.76997704265939,1.60435557976113,2.17010870715852,0.671746422719773,0.647787332037959,1.03030227053675,2.18097358169347,1.51150377475524,3.63876091781724,5.81072592264212,6.16751832032739,6.81354015969228,6.32923263108731,3.58624989140741,5.91205574721463,5.86067657252252,6.45484683583826,6.77132432971709,5.08254316765033,3.547779950752,4.71919317334678,4.89734227793444,8.34415470397843,7.03270838378945,4.94776950280074,3.39088217956774,3.40979800426155,3.48251086354301,6.80862269629368,2.4912889959823,11.0549412712967,6.77927793946262,5.86409880703815,1.81619850790011,4.78760926783834,4.74693581161327,0.845021145247767,0.850417199860174,1.67726916406701,1.01095768031846,1.50176892841506,1.28580469357664,1.71007646244749,1.9891667719909,1.82664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0.764546456250458,1.32171328579026,0.560508562981536,1.05353633910031,0.196709770113833,0,0.411202997999018,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,1.00803371612366,0.534880391567015,0.289648807765598,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.196468613246569,0.364295288292542,0,3.8945687238562,4.00498395788315,2.79211717089617,0.476981248610684,0,0,0.596287222100115,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,1.1240175325762,0,0,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,1.23108503043699,1.17002132569619,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.581267877027924,0.383382679165211,0.492663237895943,0.704387472105808,1.65862492432618,1.29707958075265,1.00993946741104,0.253991577168676,0,0,0,0,0.600686115687835,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,1.18218456121156,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,1.50999940573032,0.533637789017222,0,0,0.30239029332968,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0.850468526382578,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0.574265537996172,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0.766021480529467,2.32840940996271,0.324621940274555,1.40398589056729,1.14117339516596,1.25343916618419,0,0,0.963528450622197,1.41259795033733,0.425846237690326,0.343505344755765,0.307240764308458,1.11838053946208,0.667396566847634,0.19538809540204,0,0,0.270455678475983,0.33307196799782,2.81974010175699,0,1.02555725490326,0,0.222886768554957,0,0.47748896947538,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0.23056390438806,0,0,0.31900115973192,0,0,1.02193298195737,0.156980256395025,0,0.225595660617181,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0.269604531922708,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0,0.31593289814244,0.300646838828985,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@HADHB | |||
}} |
Latest revision as of 14:50, 16 September 2015
Short description: | p4@HADHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HADHB_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -332bp_to_NM_000183, uc002rgz.2, uc002rha.2, uc010yku.1, uc010ykv.1, uc010ykw.1_5end |
EntrezGene: | HADHB |
HGNC: | 4803 |
UniProt: | P55084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.52e-91 | 76 |
bone element | 7.49e-84 | 82 |
immune system | 2.31e-78 | 93 |
hematopoietic system | 1.67e-76 | 98 |
blood island | 1.67e-76 | 98 |
skeletal element | 3.58e-75 | 90 |
hemolymphoid system | 4.44e-68 | 108 |
skeletal system | 2.94e-66 | 100 |
lateral plate mesoderm | 8.27e-35 | 203 |
musculoskeletal system | 5.88e-34 | 167 |
connective tissue | 8.60e-21 | 371 |
mesoderm | 6.00e-17 | 315 |
mesoderm-derived structure | 6.00e-17 | 315 |
presumptive mesoderm | 6.00e-17 | 315 |