FFCP PHASE1:Hg19::chr9:139940480..139940605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56654 | |EntrezGene=56654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7899 | |HGNC=7899 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488145_5end | |association_with_transcript=0bp_to_ENST00000488145_5end | ||
|cluster_id=chr9:139940480..139940605,- | |||
|description=CAGE_peak_2_at_NPDC1_5end | |description=CAGE_peak_2_at_NPDC1_5end | ||
|id=chr9:139940480..139940605,- | |id=chr9:139940480..139940605,- | ||
|ontology_enrichment_celltype=CL:0000222!6.00e-19!119;CL:0002139!4.75e-13!24;CL:0000359!1.75e-12!32;CL:0000115!1.47e-11!35;CL:0000071!2.82e-11!18;CL:0002546!2.82e-11!18;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000213!5.38e-11!57;CL:0000215!5.38e-11!57;CL:0000055!5.46e-11!180;CL:0002078!3.26e-10!44;CL:0000680!9.14e-09!57;CL:0000056!9.14e-09!57;CL:0000355!9.14e-09!57;CL:0000183!1.27e-08!59;CL:0000220!3.42e-08!246;CL:0000187!4.02e-08!54;CL:0002321!7.79e-08!248;CL:0000393!3.05e-07!60;CL:0000211!3.05e-07!60;CL:1000413!5.60e-07!9 | |ontology_enrichment_celltype=CL:0000222!6.00e-19!119;CL:0002139!4.75e-13!24;CL:0000359!1.75e-12!32;CL:0000115!1.47e-11!35;CL:0000071!2.82e-11!18;CL:0002546!2.82e-11!18;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000213!5.38e-11!57;CL:0000215!5.38e-11!57;CL:0000055!5.46e-11!180;CL:0002078!3.26e-10!44;CL:0000680!9.14e-09!57;CL:0000056!9.14e-09!57;CL:0000355!9.14e-09!57;CL:0000183!1.27e-08!59;CL:0000220!3.42e-08!246;CL:0000187!4.02e-08!54;CL:0002321!7.79e-08!248;CL:0000393!3.05e-07!60;CL:0000211!3.05e-07!60;CL:1000413!5.60e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.63e-13;24!CL:0000359;6.04e-12;32!CL:0000071;2.74e-11;18!CL:0000115;2.88e-10;36!CL:0000192;1.31e-08;43!CL:0002078;1.21e-07;45!CL:0000213;5.26e-07;58!CL:0000215;5.26e-07;58!CL:1000413;5.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.17e-19,121;CL:0002139,4.57e-13,24;CL:0000359,1.69e-12,32;CL:0000115,4.72e-12,36;CL:0000213,1.78e-11,58;CL:0000215,1.78e-11,58;CL:0000071,2.73e-11,18;CL:0002546,2.73e-11,18;CL:0000192,4.42e-11,43;CL:0000514,4.42e-11,43;CL:0002078,1.14e-10,45;CL:0000680,1.03e-08,58;CL:0000056,1.03e-08,58;CL:0000355,1.03e-08,58;CL:0002321,4.48e-08,250;CL:0000187,4.50e-08,55;CL:0000393,3.27e-07,61;CL:0000211,3.27e-07,61;CL:1000413,5.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.74e-11;18!CL:0000514;1.31e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.29e-31!241;UBERON:0000055!4.28e-30!69;UBERON:0001981!1.79e-28!60;UBERON:0007500!1.79e-28!60;UBERON:0004537!1.79e-28!60;UBERON:0006965!1.79e-28!60;UBERON:0000477!4.36e-28!286;UBERON:0004872!1.69e-27!84;UBERON:0000025!3.07e-26!194;UBERON:0002049!1.36e-25!79;UBERON:0007798!1.36e-25!79;UBERON:0003914!7.93e-23!118;UBERON:0001637!2.77e-22!42;UBERON:0003509!2.77e-22!42;UBERON:0004572!2.77e-22!42;UBERON:0000483!3.36e-20!309;UBERON:0001009!3.72e-20!113;UBERON:0004535!1.32e-19!110;UBERON:0000119!1.98e-19!312;UBERON:0000475!2.23e-18!365;UBERON:0004573!5.40e-18!33;UBERON:0004571!5.40e-18!33;UBERON:0000468!2.10e-16!659;UBERON:0000481!1.50e-14!347;UBERON:0000467!5.07e-13!625;UBERON:0000480!1.05e-12!626;UBERON:0002100!9.62e-12!216;UBERON:0000947!1.94e-11!21;UBERON:0010191!1.94e-11!21;UBERON:0001986!2.82e-11!18;UBERON:0004638!2.82e-11!18;UBERON:0004852!2.82e-11!18;UBERON:0000490!8.04e-11!138;UBERON:0006914!2.74e-10!25;UBERON:0000487!3.05e-10!22;UBERON:0007023!6.64e-10!115;UBERON:0003103!1.54e-09!69;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63;UBERON:0001134!5.40e-09!61;UBERON:0002036!5.40e-09!61;UBERON:0003082!5.40e-09!61;UBERON:0002050!7.18e-09!605;UBERON:0005423!7.18e-09!605;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0000922!1.84e-08!612;UBERON:0003104!7.70e-08!238;UBERON:0009142!7.70e-08!238;UBERON:0005256!1.14e-07!143;UBERON:0004290!1.14e-07!70;UBERON:0007100!1.15e-07!27;UBERON:0000486!2.00e-07!82;UBERON:0000915!3.15e-07!52;UBERON:0000948!3.15e-07!24;UBERON:0005498!3.15e-07!24;UBERON:0004140!3.15e-07!24;UBERON:0009881!3.15e-07!24;UBERON:0004141!3.15e-07!24;UBERON:0003084!3.15e-07!24;UBERON:0007005!3.15e-07!24;UBERON:0004139!3.15e-07!24;UBERON:0004291!3.15e-07!24;UBERON:0000914!4.48e-07!83;UBERON:0002329!4.48e-07!83;UBERON:0003077!4.48e-07!83;UBERON:0003059!4.48e-07!83;UBERON:0007282!4.48e-07!83;UBERON:0009618!4.48e-07!83;UBERON:0007285!4.48e-07!83;UBERON:0003915!5.60e-07!9;UBERON:0004700!5.60e-07!9;UBERON:0001917!5.60e-07!9;UBERON:0009569!6.99e-07!113 | |ontology_enrichment_uberon=UBERON:0004111!1.29e-31!241;UBERON:0000055!4.28e-30!69;UBERON:0001981!1.79e-28!60;UBERON:0007500!1.79e-28!60;UBERON:0004537!1.79e-28!60;UBERON:0006965!1.79e-28!60;UBERON:0000477!4.36e-28!286;UBERON:0004872!1.69e-27!84;UBERON:0000025!3.07e-26!194;UBERON:0002049!1.36e-25!79;UBERON:0007798!1.36e-25!79;UBERON:0003914!7.93e-23!118;UBERON:0001637!2.77e-22!42;UBERON:0003509!2.77e-22!42;UBERON:0004572!2.77e-22!42;UBERON:0000483!3.36e-20!309;UBERON:0001009!3.72e-20!113;UBERON:0004535!1.32e-19!110;UBERON:0000119!1.98e-19!312;UBERON:0000475!2.23e-18!365;UBERON:0004573!5.40e-18!33;UBERON:0004571!5.40e-18!33;UBERON:0000468!2.10e-16!659;UBERON:0000481!1.50e-14!347;UBERON:0000467!5.07e-13!625;UBERON:0000480!1.05e-12!626;UBERON:0002100!9.62e-12!216;UBERON:0000947!1.94e-11!21;UBERON:0010191!1.94e-11!21;UBERON:0001986!2.82e-11!18;UBERON:0004638!2.82e-11!18;UBERON:0004852!2.82e-11!18;UBERON:0000490!8.04e-11!138;UBERON:0006914!2.74e-10!25;UBERON:0000487!3.05e-10!22;UBERON:0007023!6.64e-10!115;UBERON:0003103!1.54e-09!69;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63;UBERON:0001134!5.40e-09!61;UBERON:0002036!5.40e-09!61;UBERON:0003082!5.40e-09!61;UBERON:0002050!7.18e-09!605;UBERON:0005423!7.18e-09!605;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0000922!1.84e-08!612;UBERON:0003104!7.70e-08!238;UBERON:0009142!7.70e-08!238;UBERON:0005256!1.14e-07!143;UBERON:0004290!1.14e-07!70;UBERON:0007100!1.15e-07!27;UBERON:0000486!2.00e-07!82;UBERON:0000915!3.15e-07!52;UBERON:0000948!3.15e-07!24;UBERON:0005498!3.15e-07!24;UBERON:0004140!3.15e-07!24;UBERON:0009881!3.15e-07!24;UBERON:0004141!3.15e-07!24;UBERON:0003084!3.15e-07!24;UBERON:0007005!3.15e-07!24;UBERON:0004139!3.15e-07!24;UBERON:0004291!3.15e-07!24;UBERON:0000914!4.48e-07!83;UBERON:0002329!4.48e-07!83;UBERON:0003077!4.48e-07!83;UBERON:0003059!4.48e-07!83;UBERON:0007282!4.48e-07!83;UBERON:0009618!4.48e-07!83;UBERON:0007285!4.48e-07!83;UBERON:0003915!5.60e-07!9;UBERON:0004700!5.60e-07!9;UBERON:0001917!5.60e-07!9;UBERON:0009569!6.99e-07!113 | ||
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| ||
|short_description=p2@NPDC1 | |short_description=p2@NPDC1 | ||
}} | }} |
Latest revision as of 15:34, 16 September 2015
Short description: | p2@NPDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000488145_5end |
EntrezGene: | NPDC1 |
HGNC: | 7899 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.17e-19 | 121 |
endothelial cell of vascular tree | 4.57e-13 | 24 |
vascular associated smooth muscle cell | 1.69e-12 | 32 |
endothelial cell | 4.72e-12 | 36 |
lining cell | 1.78e-11 | 58 |
barrier cell | 1.78e-11 | 58 |
blood vessel endothelial cell | 2.73e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.73e-11 | 18 |
smooth muscle cell | 4.42e-11 | 43 |
smooth muscle myoblast | 4.42e-11 | 43 |
meso-epithelial cell | 1.14e-10 | 45 |
muscle precursor cell | 1.03e-08 | 58 |
myoblast | 1.03e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-08 | 58 |
embryonic cell | 4.48e-08 | 250 |
muscle cell | 4.50e-08 | 55 |
electrically responsive cell | 3.27e-07 | 61 |
electrically active cell | 3.27e-07 | 61 |
endothelial cell of artery | 5.50e-07 | 9 |