FFCP PHASE1:Hg19::chr19:18499150..18499175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9518 | |EntrezGene=9518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30142 | |HGNC=30142 | ||
|TSSclassifier=strong | |||
|UniProt=Q99988 | |UniProt=Q99988 | ||
|association_with_transcript=-432bp_to_AF173860_5end | |association_with_transcript=-432bp_to_AF173860_5end | ||
|cluster_id=chr19:18499150..18499175,+ | |||
|coexpression_cluster_id=C1813 | |coexpression_cluster_id=C1813 | ||
|description=CAGE_peak_3_at_GDF15_5end | |description=CAGE_peak_3_at_GDF15_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.49e-13!254;CL:0002321!4.69e-11!248;CL:0000220!4.79e-11!246;CL:0000222!1.44e-09!119;CL:0002139!8.64e-09!24;CL:0000548!5.79e-08!679;CL:0000004!5.79e-08!679;CL:0000255!5.79e-08!679;CL:0000012!1.17e-07!682;CL:0000071!2.81e-07!18;CL:0002546!2.81e-07!18;CL:0000055!5.69e-07!180 | |ontology_enrichment_celltype=CL:0000066!1.49e-13!254;CL:0002321!4.69e-11!248;CL:0000220!4.79e-11!246;CL:0000222!1.44e-09!119;CL:0002139!8.64e-09!24;CL:0000548!5.79e-08!679;CL:0000004!5.79e-08!679;CL:0000255!5.79e-08!679;CL:0000012!1.17e-07!682;CL:0000071!2.81e-07!18;CL:0002546!2.81e-07!18;CL:0000055!5.69e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.89e-08;10!CL:0002139;1.70e-07;24 | |ontology_enrichment_celltype_v019=CL:0000148;1.89e-08;10!CL:0002139;1.70e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.57e-08,10;CL:0000541,1.57e-08,10;CL:0002139,1.35e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.24e-08;2!DOID:2394;3.43e-08;14 | |ontology_enrichment_disease_v019=DOID:1909;1.24e-08;2!DOID:2394;3.43e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.22e-08,2;DOID:2394,3.62e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.07e-10!79;UBERON:0007798!4.07e-10!79;UBERON:0000055!1.60e-09!69;UBERON:0005156!5.11e-09!59;UBERON:0000990!5.11e-09!59;UBERON:0002100!1.15e-08!216;UBERON:0003914!1.61e-08!118;UBERON:0001981!3.26e-08!60;UBERON:0007500!3.26e-08!60;UBERON:0004537!3.26e-08!60;UBERON:0006965!3.26e-08!60;UBERON:0003886!3.46e-08!63;UBERON:0000490!3.91e-08!138;UBERON:0004872!6.08e-08!84;UBERON:0000466!1.16e-07!126;UBERON:0000991!1.77e-07!21;UBERON:0009196!1.77e-07!21;UBERON:0009117!1.77e-07!21;UBERON:0005564!1.77e-07!21;UBERON:0002553!1.85e-07!70;UBERON:0006554!1.90e-07!44;UBERON:0001637!2.04e-07!42;UBERON:0003509!2.04e-07!42;UBERON:0004572!2.04e-07!42;UBERON:0000464!2.73e-07!104;UBERON:0001986!2.81e-07!18;UBERON:0004638!2.81e-07!18;UBERON:0004852!2.81e-07!18;UBERON:0003064!3.08e-07!37;UBERON:0001008!4.24e-07!45;UBERON:0009569!5.52e-07!113;UBERON:0004176!6.64e-07!22;UBERON:0003937!8.70e-07!12;UBERON:0005399!8.70e-07!12 | |ontology_enrichment_uberon=UBERON:0002049!4.07e-10!79;UBERON:0007798!4.07e-10!79;UBERON:0000055!1.60e-09!69;UBERON:0005156!5.11e-09!59;UBERON:0000990!5.11e-09!59;UBERON:0002100!1.15e-08!216;UBERON:0003914!1.61e-08!118;UBERON:0001981!3.26e-08!60;UBERON:0007500!3.26e-08!60;UBERON:0004537!3.26e-08!60;UBERON:0006965!3.26e-08!60;UBERON:0003886!3.46e-08!63;UBERON:0000490!3.91e-08!138;UBERON:0004872!6.08e-08!84;UBERON:0000466!1.16e-07!126;UBERON:0000991!1.77e-07!21;UBERON:0009196!1.77e-07!21;UBERON:0009117!1.77e-07!21;UBERON:0005564!1.77e-07!21;UBERON:0002553!1.85e-07!70;UBERON:0006554!1.90e-07!44;UBERON:0001637!2.04e-07!42;UBERON:0003509!2.04e-07!42;UBERON:0004572!2.04e-07!42;UBERON:0000464!2.73e-07!104;UBERON:0001986!2.81e-07!18;UBERON:0004638!2.81e-07!18;UBERON:0004852!2.81e-07!18;UBERON:0003064!3.08e-07!37;UBERON:0001008!4.24e-07!45;UBERON:0009569!5.52e-07!113;UBERON:0004176!6.64e-07!22;UBERON:0003937!8.70e-07!12;UBERON:0005399!8.70e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004909;9.78e-08;2!UBERON:0001473;9.66e-07;8!UBERON:0004536;9.66e-07;8!UBERON:0006558;9.66e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004909;9.78e-08;2!UBERON:0001473;9.66e-07;8!UBERON:0004536;9.66e-07;8!UBERON:0006558;9.66e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,9.03e-08,2;UBERON:0001473,7.85e-07,8;UBERON:0004536,7.85e-07,8;UBERON:0006558,7.85e-07,8 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,0,0.728590576585084,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.838998872419812,1.37559020970034,1.46296476575767,0,0.71153252537342,0,1.61131726843659,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,0,0,0.112611480483322,0,2.84779697870439,1.28241220751285,0,0,0,0,0.759783069987479,0.264818361626438,1.72101972449288,0.354668382198357,0,1.06748995729705,0.98667019366864,0,0.67355336034844,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0,2.93227474779292,0,0,0,0.117408694235822,1.44366447761074,1.85194205030644,2.09279567458058,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.176096868026452,0.414656231081544,0.144119953416961,0.6312121671319,0,3.81988425558278,0,1.71072446022705,1.33675740514321,2.70308752059526,5.43070221998099,0,0,0.07333828582095,0,0,0,1.86156681609409,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,1.74306691720059,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,11.3703752027992,7.24311499047534,0,0,0.0868836144680828,0.979005787313703,0.686286847621712,0,0,0,0,1.66435439510497,0,2.23297027036899,0.153461973288062,0.280660094433074,0.640695746278505,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0,0.362578348774867,0.40101294060657,2.3941057123333,0.574072240823034,0.728364672026868,2.09799063935079,1.35359883872224,0.616122696835318,1.56869953835371,0,0.105551628892876,0,0.680374821106063,0,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0.671624264166535,0,1.0457418040996,0.256450125116389,0.328014645699706,0.650756789328606,1.44257416306811,0,0,0,0,1.6068392984416,0.870036464629098,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.991709492165869,0,0,3.4393645490887,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.55597265731176,1.28812398067792,0,0.316379424718726,0.762520775695299,0,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.942499218765491,0.202182481573316,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,2.2624869112594,0,0,0,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0.7133421029625,0,0,0.329294892959902,0,0,0.48111056362756,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0,1.02547850262301,0,1.79515288819544,0,0,0.641183153813036,1.06606955203727,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.843992258112108,1.46909527343233,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.627865836814451,1.19472429772959,0.569219092059585,0.416024019039416,0.520679215005393,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0.794305140223502,0,1.09633539717401,0,0,0,0,0.426905989478705,0,0.432271251462318,0,0.857974989309823,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0.236349546921671,0.164831716762333,0.13480708770837,0.688992370603241,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.236417121897595,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.320362237703084,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.124980407962107,12.4352276384151,11.9895440088886,5.88164549245429,0,0,0,0.467426619694449,0,0,0.251567901752575,0,7.55172225709848,0.151230923763239,0.310874401165561,0,0.477890301491107,8.09645601894488,0.776314784381297,0,1.32920857278997,2.60872530905867,0,0,0,1.09109195521536,0.537052785212442,1.85613503951397,0.796191777397232,0,0,0.336749488765919,0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| ||
|short_description=p3@GDF15 | |short_description=p3@GDF15 | ||
}} | }} |
Latest revision as of 15:52, 16 September 2015
Short description: | p3@GDF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDF15_5end |
Coexpression cluster: | C1813_somatostatinoma_melanoma_mesenchymal_placenta_smallcell_Keratocytes_renal |
Association with transcript: | -432bp_to_AF173860_5end |
EntrezGene: | GDF15 |
HGNC: | 30142 |
UniProt: | Q99988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.57e-08 | 10 |
melanoblast | 1.57e-08 | 10 |
endothelial cell of vascular tree | 1.35e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 9.03e-08 | 2 |
lymphatic vessel | 7.85e-07 | 8 |
lymph vasculature | 7.85e-07 | 8 |
lymphatic part of lymphoid system | 7.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.22e-08 | 2 |
ovarian cancer | 3.62e-08 | 14 |