FFCP PHASE1:Hg19::chr12:117197711..117197750,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:117197711..117197750,+ to FFCP PHASE1:Hg19::chr12:117197711..117197750,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84900 | |EntrezGene=84900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25905 | |HGNC=25905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_uc001twc.3_5end | |||
|cluster_id=chr12:117197711..117197750,+ | |||
|description=CAGE_peak_4_at_RNFT2_5end | |||
|id=chr12:117197711..117197750,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.09e-08!7;CL:0000586!5.09e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.83e-14;7!CL:0000586;1.83e-14;7!CL:0002322;2.93e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.51e-14,7;CL:0000586,1.51e-14,7;CL:0002322,2.56e-09,5;CL:0002536,7.68e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.81e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.99e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.19e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.43e-11,14;UBERON:0000158,3.43e-11,14;UBERON:0000305,1.21e-09,7;UBERON:0004871,2.19e-08,8 | |||
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| ||
|short_description=p4@RNFT2 | |||
}} | }} |
Latest revision as of 16:03, 16 September 2015
Short description: | p4@RNFT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNFT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc001twc.3_5end |
EntrezGene: | RNFT2 |
HGNC: | 25905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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germ line cell | 1.51e-14 | 7 |
germ cell | 1.51e-14 | 7 |
embryonic stem cell | 2.56e-09 | 5 |
amniotic epithelial cell | 7.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.43e-11 | 14 |
membranous layer | 3.43e-11 | 14 |
amnion | 1.21e-09 | 7 |
somatic layer of lateral plate mesoderm | 2.19e-08 | 8 |
Ontology term | p-value | n |
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myeloid leukemia | 4.99e-07 | 31 |