FFCP PHASE1:Hg19::chr8:140614315..140614330,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51305 | |EntrezGene=51305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6283 | |HGNC=6283 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000523653_5end | |association_with_transcript=-8bp_to_ENST00000523653_5end | ||
|cluster_id=chr8:140614315..140614330,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_2_at_KCNK9_5end | |description=CAGE_peak_2_at_KCNK9_5end | ||
|id=chr8:140614315..140614330,- | |id=chr8:140614315..140614330,- | ||
|ontology_enrichment_celltype=CL:1000507!7.83e-09!12;CL:1000494!7.83e-09!12;CL:1000497!4.99e-08!18;CL:0002518!4.99e-08!18 | |ontology_enrichment_celltype=CL:1000507!7.83e-09!12;CL:1000494!7.83e-09!12;CL:1000497!4.99e-08!18;CL:0002518!4.99e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.04e-16;10!CL:1000494;1.04e-16;10!CL:1000449;2.30e-11;15!CL:1000497;4.22e-10;17!CL:0002518;4.22e-10;17!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0002306;2.88e-07;3!CL:0002681;6.74e-07;12!CL:0002584;6.74e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.57e-17,10;CL:1000494,8.57e-17,10;CL:1000449,2.03e-11,15;CL:1000497,3.78e-10,17;CL:0002518,3.78e-10,17;CL:0000239,2.97e-07,3;CL:1000615,2.97e-07,3;CL:0002306,2.97e-07,3;CL:0002681,6.35e-07,12;CL:0002584,6.35e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!1.89e-10!14;DOID:299!3.89e-09!25;DOID:4929!6.24e-09!2;DOID:162!1.64e-08!235;DOID:14566!3.39e-08!239;DOID:0050686!2.90e-07!137 | |ontology_enrichment_disease=DOID:3119!1.89e-10!14;DOID:299!3.89e-09!25;DOID:4929!6.24e-09!2;DOID:162!1.64e-08!235;DOID:14566!3.39e-08!239;DOID:0050686!2.90e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:4960;8.94e-20;1!DOID:0070004;8.94e-20;1!DOID:12603;1.42e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.95e-20,1;DOID:0070004,8.95e-20,1;DOID:12603,1.30e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!7.83e-09!12;UBERON:0001231!7.83e-09!12;UBERON:0004810!7.83e-09!12;UBERON:0002113!9.10e-07!27;UBERON:0003918!9.10e-07!27;UBERON:0005095!9.10e-07!27;UBERON:0007687!9.10e-07!27;UBERON:0003887!9.20e-07!21 | |ontology_enrichment_uberon=UBERON:0009773!7.83e-09!12;UBERON:0001231!7.83e-09!12;UBERON:0004810!7.83e-09!12;UBERON:0002113!9.10e-07!27;UBERON:0003918!9.10e-07!27;UBERON:0005095!9.10e-07!27;UBERON:0007687!9.10e-07!27;UBERON:0003887!9.20e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.04e-16;10!UBERON:0009773;1.04e-16;10!UBERON:0001231;1.04e-16;10!UBERON:0004810;1.04e-16;10!UBERON:0006555;2.30e-11;15!UBERON:0004819;2.30e-11;15!UBERON:0001285;2.30e-11;15!UBERON:0007684;2.30e-11;15!UBERON:0002113;2.54e-07;24!UBERON:0011143;2.54e-07;24!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0004134;2.88e-07;3!UBERON:0001225;6.74e-07;12!UBERON:0008987;6.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.57e-17,10;UBERON:0004211,2.03e-11,15;UBERON:0009773,2.03e-11,15;UBERON:0001231,2.03e-11,15;UBERON:0001285,2.03e-11,15;UBERON:0007684,2.03e-11,15;UBERON:0004208,2.03e-11,15;UBERON:0006555,9.59e-11,16;UBERON:0004819,9.59e-11,16;UBERON:0006853,2.97e-07,3;UBERON:0007685,2.97e-07,3;UBERON:0004134,2.97e-07,3;UBERON:0001225,6.35e-07,12;UBERON:0008987,6.35e-07,12;UBERON:0002113,7.88e-07,26;UBERON:0003918,7.88e-07,26;UBERON:0011143,7.88e-07,26;UBERON:0005095,7.88e-07,26;UBERON:0007687,7.88e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80479845162965,0.462092022626489,1.56869953835371,0,0.633309773357254,0,0,0,0,0,0,0,0,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90186667764009,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,5.54048765428183,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.47182388134486,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.883352102537187,0,0,0,2.3196288626764,0,0,0,0,0,1.31928620094515,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80479845162965,0.462092022626489,1.56869953835371,0,0.633309773357254,0,0,0,0,0,0,0,0,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90186667764009,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,5.54048765428183,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.47182388134486,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.883352102537187,0,0,0,2.3196288626764,0,0,0,0,0,1.31928620094515,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | ||
|short_description=p2@KCNK9 | |short_description=p2@KCNK9 | ||
}} | }} |
Latest revision as of 18:49, 16 September 2015
Short description: | p2@KCNK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNK9_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -8bp_to_ENST00000523653_5end |
EntrezGene: | KCNK9 |
HGNC: | 6283 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.57e-17 | 10 |
nephron tubule epithelial cell | 8.57e-17 | 10 |
epithelial cell of nephron | 2.03e-11 | 15 |
kidney cell | 3.78e-10 | 17 |
kidney epithelial cell | 3.78e-10 | 17 |
brush border epithelial cell | 2.97e-07 | 3 |
kidney cortex tubule cell | 2.97e-07 | 3 |
epithelial cell of proximal tubule | 2.97e-07 | 3 |
kidney cortical cell | 6.35e-07 | 12 |
renal cortical epithelial cell | 6.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.57e-17 | 10 |
nephron epithelium | 2.03e-11 | 15 |
renal tubule | 2.03e-11 | 15 |
nephron tubule | 2.03e-11 | 15 |
nephron | 2.03e-11 | 15 |
uriniferous tubule | 2.03e-11 | 15 |
nephrogenic mesenchyme | 2.03e-11 | 15 |
excretory tube | 9.59e-11 | 16 |
kidney epithelium | 9.59e-11 | 16 |
renal cortex tubule | 2.97e-07 | 3 |
region of nephron tubule | 2.97e-07 | 3 |
proximal tubule | 2.97e-07 | 3 |
cortex of kidney | 6.35e-07 | 12 |
renal parenchyma | 6.35e-07 | 12 |
kidney | 7.88e-07 | 26 |
kidney mesenchyme | 7.88e-07 | 26 |
upper urinary tract | 7.88e-07 | 26 |
kidney rudiment | 7.88e-07 | 26 |
kidney field | 7.88e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |
acute leukemia | 1.30e-19 | 1 |