FFCP PHASE1:Hg19::chr8:141018677..141018706,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000524162_5end | |||
|cluster_id=chr8:141018677..141018706,- | |||
|coexpression_cluster_id=C1119 | |||
|description=CAGE_peak_5_at_TRAPPC9_5end | |||
|id=chr8:141018677..141018706,- | |||
|ontology_enrichment_celltype=CL:0000181!7.48e-08!12;CL:0000417!7.48e-08!12;CL:0000668!7.48e-08!12;CL:0000414!7.48e-08!12;CL:0000412!7.48e-08!12;CL:0000182!7.48e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.44e-16;1!CL:0000123;2.23e-08;2!CL:0002535;2.23e-08;2!CL:0000242;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.44e-16,1;CL:0002535,2.31e-08,2;CL:0000242,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.78e-43;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;7.95e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.48e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.81e-27!57;UBERON:0005068!5.81e-27!57;UBERON:0006241!5.81e-27!57;UBERON:0007135!5.81e-27!57;UBERON:0002616!7.01e-26!59;UBERON:0000955!5.01e-21!69;UBERON:0006238!5.01e-21!69;UBERON:0004733!6.35e-21!12;UBERON:0002028!6.35e-21!12;UBERON:0007277!6.35e-21!12;UBERON:0004732!3.32e-19!13;UBERON:0001017!8.70e-19!82;UBERON:0003075!6.04e-18!86;UBERON:0007284!6.04e-18!86;UBERON:0007023!7.03e-18!115;UBERON:0002298!9.74e-18!8;UBERON:0005743!1.12e-17!86;UBERON:0002346!6.54e-17!90;UBERON:0003076!1.86e-16!15;UBERON:0003057!1.86e-16!15;UBERON:0002680!2.85e-16!9;UBERON:0001895!2.85e-16!9;UBERON:0010092!2.85e-16!9;UBERON:0000073!1.60e-15!94;UBERON:0001016!1.60e-15!94;UBERON:0002780!2.48e-14!41;UBERON:0001890!2.48e-14!41;UBERON:0006240!2.48e-14!41;UBERON:0003080!6.30e-14!42;UBERON:0000988!6.14e-13!3;UBERON:0006331!1.16e-12!3;UBERON:0000033!8.71e-11!123;UBERON:0002020!8.94e-11!34;UBERON:0003528!8.94e-11!34;UBERON:0001893!1.09e-10!34;UBERON:0000153!4.74e-10!129;UBERON:0007811!4.74e-10!129;UBERON:0000025!7.31e-10!194;UBERON:0002791!4.43e-09!33;UBERON:0002148!4.79e-09!2;UBERON:0009662!4.79e-09!2;UBERON:0003056!9.61e-09!61;UBERON:0001950!1.05e-07!20;UBERON:0001869!1.65e-07!32;UBERON:0000483!1.95e-07!309;UBERON:0004111!2.05e-07!241;UBERON:0000119!2.72e-07!312;UBERON:0004121!2.72e-07!169;UBERON:0002308!4.06e-07!9;UBERON:0000125!4.06e-07!9;UBERON:0000924!5.23e-07!173;UBERON:0006601!5.23e-07!173;UBERON:0002037!5.70e-07!6;UBERON:0006215!5.70e-07!6;UBERON:0002619!5.86e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.19e-25;9!UBERON:0001895;1.19e-25;9!UBERON:0002037;3.91e-22;6!UBERON:0004733;2.44e-19;12!UBERON:0002028;2.44e-19;12!UBERON:0004732;7.01e-18;13!UBERON:0002108;4.44e-12;4!UBERON:0006955;2.23e-08;2!UBERON:0004801;2.23e-08;2!UBERON:0000160;1.53e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.19e-25,9;UBERON:0001895,1.19e-25,9;UBERON:0010092,1.19e-25,9;UBERON:0002037,4.06e-22,6;UBERON:0006215,4.06e-22,6;UBERON:0004733,2.44e-19,12;UBERON:0002028,2.44e-19,12;UBERON:0007277,2.44e-19,12;UBERON:0004732,7.01e-18,13;UBERON:0003076,1.53e-15,15;UBERON:0003057,1.53e-15,15;UBERON:0002108,4.44e-12,4;UBERON:0006955,2.31e-08,2;UBERON:0004801,2.31e-08,2;UBERON:0000160,1.53e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,4.5774520895125,11.0579259931225,7.38869047383869,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.530745387020035,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,2.57392496792947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0.496771223531068,0,0,0,0,0,0,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,30.4216884348478,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,2.31097092121228,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97376937903421,0,0,0,12.9828045467339,0.154348316215889,1.5299169235277,39.9769701907294,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TRAPPC9 | |||
}} |
Latest revision as of 18:58, 16 September 2015
Short description: | p5@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAPPC9_5end |
Coexpression cluster: | C1119_nonsmall_smallcell_argyrophil_small_duodenum_esophagus_cerebellum |
Association with transcript: | 0bp_to_ENST00000524162_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.44e-16 | 1 |
epithelial cell of cervix | 2.31e-08 | 2 |
Merkel cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.19e-25 | 9 |
metencephalon | 1.19e-25 | 9 |
future metencephalon | 1.19e-25 | 9 |
cerebellum | 4.06e-22 | 6 |
rhombic lip | 4.06e-22 | 6 |
segmental subdivision of hindbrain | 2.44e-19 | 12 |
hindbrain | 2.44e-19 | 12 |
presumptive hindbrain | 2.44e-19 | 12 |
segmental subdivision of nervous system | 7.01e-18 | 13 |
posterior neural tube | 1.53e-15 | 15 |
chordal neural plate | 1.53e-15 | 15 |
small intestine | 4.44e-12 | 4 |
uterine epithelium | 2.31e-08 | 2 |
cervix epithelium | 2.31e-08 | 2 |
intestine | 1.53e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.48e-10 | 14 |