FFCP PHASE1:Hg19::chr19:19617430..19617443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54815 | |EntrezGene=54815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29989 | |HGNC=29989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-476bp_to_AK024670_5end | |association_with_transcript=-476bp_to_AK024670_5end | ||
|cluster_id=chr19:19617430..19617443,+ | |||
|description=CAGE_peak_9_at_GATAD2A_5end | |description=CAGE_peak_9_at_GATAD2A_5end | ||
|id=chr19:19617430..19617443,+ | |id=chr19:19617430..19617443,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.42e-12!625;CL:0000003!4.25e-12!722;CL:0000548!1.10e-11!679;CL:0000004!1.10e-11!679;CL:0000255!1.10e-11!679;CL:0000012!1.31e-11!682;CL:0002087!2.05e-11!119;CL:0002032!8.02e-11!165;CL:0000837!8.02e-11!165;CL:0000766!8.25e-11!76;CL:0000988!1.92e-10!182;CL:0002194!2.16e-10!63;CL:0000576!2.16e-10!63;CL:0000040!2.16e-10!63;CL:0000559!2.16e-10!63;CL:0002031!2.93e-10!124;CL:0000037!9.58e-10!172;CL:0000566!9.58e-10!172;CL:0000839!1.77e-09!70;CL:0002009!2.36e-09!65;CL:0002371!2.77e-09!591;CL:0000738!2.78e-09!140;CL:0000063!8.98e-09!578;CL:0000763!1.98e-08!112;CL:0000049!1.98e-08!112;CL:0002057!2.07e-08!42;CL:0000557!3.68e-08!71;CL:0000860!4.50e-08!45 | |ontology_enrichment_celltype=CL:0000144!3.42e-12!625;CL:0000003!4.25e-12!722;CL:0000548!1.10e-11!679;CL:0000004!1.10e-11!679;CL:0000255!1.10e-11!679;CL:0000012!1.31e-11!682;CL:0002087!2.05e-11!119;CL:0002032!8.02e-11!165;CL:0000837!8.02e-11!165;CL:0000766!8.25e-11!76;CL:0000988!1.92e-10!182;CL:0002194!2.16e-10!63;CL:0000576!2.16e-10!63;CL:0000040!2.16e-10!63;CL:0000559!2.16e-10!63;CL:0002031!2.93e-10!124;CL:0000037!9.58e-10!172;CL:0000566!9.58e-10!172;CL:0000839!1.77e-09!70;CL:0002009!2.36e-09!65;CL:0002371!2.77e-09!591;CL:0000738!2.78e-09!140;CL:0000063!8.98e-09!578;CL:0000763!1.98e-08!112;CL:0000049!1.98e-08!112;CL:0002057!2.07e-08!42;CL:0000557!3.68e-08!71;CL:0000860!4.50e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-10;33!CL:0002057;2.21e-10;33!CL:0000473;6.67e-10;39!CL:0000234;6.67e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.76e-11,161;CL:0000837,1.76e-11,161;CL:0000766,2.12e-11,72;CL:0000473,7.17e-11,48;CL:0000234,7.17e-11,48;CL:0000988,8.92e-11,177;CL:0002087,8.97e-11,115;CL:0000037,1.63e-10,168;CL:0002194,1.67e-10,59;CL:0000576,1.67e-10,59;CL:0000040,1.67e-10,59;CL:0000559,1.67e-10,59;CL:0002031,4.68e-10,120;CL:0000839,1.07e-09,66;CL:0002009,1.29e-09,61;CL:0000738,1.37e-09,136;CL:0000763,1.52e-09,108;CL:0000049,1.52e-09,108;CL:0000860,3.78e-09,42;CL:0002057,3.78e-09,42;CL:0000557,1.37e-08,67;CL:0000034,5.80e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.68e-09!80;UBERON:0001474!4.29e-08!86;UBERON:0002390!6.37e-08!102;UBERON:0003061!6.37e-08!102;UBERON:0002193!2.35e-07!112;UBERON:0004765!4.62e-07!101;UBERON:0001434!4.62e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.90e-10,76;UBERON:0001474,1.26e-08,82;UBERON:0002390,3.25e-08,98;UBERON:0003061,3.25e-08,98;UBERON:0004765,7.38e-08,90;UBERON:0002193,1.29e-07,108;UBERON:0002405,1.47e-07,93;UBERON:0001434,2.15e-07,100 | |||
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| ||
|short_description=p9@GATAD2A | |short_description=p9@GATAD2A | ||
}} | }} |
Latest revision as of 20:04, 16 September 2015
Short description: | p9@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GATAD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -476bp_to_AK024670_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.76e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-11 | 161 |
myeloid leukocyte | 2.12e-11 | 72 |
defensive cell | 7.17e-11 | 48 |
phagocyte | 7.17e-11 | 48 |
hematopoietic cell | 8.92e-11 | 177 |
nongranular leukocyte | 8.97e-11 | 115 |
hematopoietic stem cell | 1.63e-10 | 168 |
monopoietic cell | 1.67e-10 | 59 |
monocyte | 1.67e-10 | 59 |
monoblast | 1.67e-10 | 59 |
promonocyte | 1.67e-10 | 59 |
hematopoietic lineage restricted progenitor cell | 4.68e-10 | 120 |
myeloid lineage restricted progenitor cell | 1.07e-09 | 66 |
macrophage dendritic cell progenitor | 1.29e-09 | 61 |
leukocyte | 1.37e-09 | 136 |
myeloid cell | 1.52e-09 | 108 |
common myeloid progenitor | 1.52e-09 | 108 |
classical monocyte | 3.78e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.78e-09 | 42 |
granulocyte monocyte progenitor cell | 1.37e-08 | 67 |
stem cell | 5.80e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.90e-10 | 76 |
bone element | 1.26e-08 | 82 |
hematopoietic system | 3.25e-08 | 98 |
blood island | 3.25e-08 | 98 |
skeletal element | 7.38e-08 | 90 |
hemolymphoid system | 1.29e-07 | 108 |
immune system | 1.47e-07 | 93 |
skeletal system | 2.15e-07 | 100 |