FFCP PHASE1:Hg19::chr16:50715239..50715250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124460 | |EntrezGene=124460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30390 | |HGNC=30390 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z614 | |UniProt=Q7Z614 | ||
|association_with_transcript=13bp_to_ENST00000300590,ENST00000413750,ENST00000423026,NM_001144972,NM_153337,NM_182854,uc002egi.3,uc002egk.2,uc010vgp.1_5end | |association_with_transcript=13bp_to_ENST00000300590,ENST00000413750,ENST00000423026,NM_001144972,NM_153337,NM_182854,uc002egi.3,uc002egk.2,uc010vgp.1_5end | ||
|cluster_id=chr16:50715239..50715250,- | |||
|description=CAGE_peak_3_at_SNX20_5end | |description=CAGE_peak_3_at_SNX20_5end | ||
|id=chr16:50715239..50715250,- | |id=chr16:50715239..50715250,- | ||
|ontology_enrichment_celltype=CL:0000037!1.81e-89!172;CL:0000566!1.81e-89!172;CL:0000738!1.69e-86!140;CL:0002032!1.75e-86!165;CL:0000837!1.75e-86!165;CL:0000988!5.44e-82!182;CL:0002031!3.01e-75!124;CL:0002087!4.99e-74!119;CL:0000763!2.36e-43!112;CL:0000049!2.36e-43!112;CL:0000766!3.14e-39!76;CL:0000542!4.09e-39!53;CL:0000051!4.09e-39!53;CL:0000838!2.05e-38!52;CL:0000839!2.39e-34!70;CL:0000557!7.97e-34!71;CL:0002194!2.13e-30!63;CL:0000576!2.13e-30!63;CL:0000040!2.13e-30!63;CL:0000559!2.13e-30!63;CL:0002009!2.27e-30!65;CL:0002057!7.55e-26!42;CL:0000860!3.21e-23!45;CL:0000134!4.15e-20!358;CL:0002320!5.84e-19!365;CL:0000945!9.09e-19!24;CL:0000826!9.09e-19!24;CL:0000084!3.42e-18!25;CL:0000827!3.42e-18!25;CL:0000219!5.48e-15!390;CL:0000791!9.75e-15!18;CL:0000789!9.75e-15!18;CL:0002420!9.75e-15!18;CL:0002419!9.75e-15!18;CL:0000790!9.75e-15!18;CL:0000236!4.16e-11!14;CL:0000048!8.15e-11!430;CL:0000723!3.47e-10!436;CL:0000625!6.69e-10!11;CL:0000034!2.19e-09!444;CL:0002393!4.93e-08!9;CL:0002397!4.93e-08!9;CL:0000990!2.36e-07!8;CL:0000451!2.87e-07!10 | |ontology_enrichment_celltype=CL:0000037!1.81e-89!172;CL:0000566!1.81e-89!172;CL:0000738!1.69e-86!140;CL:0002032!1.75e-86!165;CL:0000837!1.75e-86!165;CL:0000988!5.44e-82!182;CL:0002031!3.01e-75!124;CL:0002087!4.99e-74!119;CL:0000763!2.36e-43!112;CL:0000049!2.36e-43!112;CL:0000766!3.14e-39!76;CL:0000542!4.09e-39!53;CL:0000051!4.09e-39!53;CL:0000838!2.05e-38!52;CL:0000839!2.39e-34!70;CL:0000557!7.97e-34!71;CL:0002194!2.13e-30!63;CL:0000576!2.13e-30!63;CL:0000040!2.13e-30!63;CL:0000559!2.13e-30!63;CL:0002009!2.27e-30!65;CL:0002057!7.55e-26!42;CL:0000860!3.21e-23!45;CL:0000134!4.15e-20!358;CL:0002320!5.84e-19!365;CL:0000945!9.09e-19!24;CL:0000826!9.09e-19!24;CL:0000084!3.42e-18!25;CL:0000827!3.42e-18!25;CL:0000219!5.48e-15!390;CL:0000791!9.75e-15!18;CL:0000789!9.75e-15!18;CL:0002420!9.75e-15!18;CL:0002419!9.75e-15!18;CL:0000790!9.75e-15!18;CL:0000236!4.16e-11!14;CL:0000048!8.15e-11!430;CL:0000723!3.47e-10!436;CL:0000625!6.69e-10!11;CL:0000034!2.19e-09!444;CL:0002393!4.93e-08!9;CL:0002397!4.93e-08!9;CL:0000990!2.36e-07!8;CL:0000451!2.87e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.53e-20;25!CL:0000542;2.66e-19;53!CL:0000791;2.01e-17;18!CL:0000789;2.01e-17;18!CL:0002419;2.01e-17;18!CL:0000625;4.72e-15;11!CL:0000945;4.67e-14;24!CL:0002087;1.20e-13;104!CL:0000738;2.32e-13;136!CL:0000576;4.68e-11;48!CL:0000766;2.02e-10;69!CL:0000988;1.20e-09;177!CL:0000236;4.65e-09;13!CL:0000860;9.83e-08;33!CL:0002057;9.83e-08;33!CL:0000473;1.30e-07;39!CL:0000234;1.30e-07;39!CL:0000097;6.39e-07;5!CL:0000219;7.62e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.73e-61,136;CL:0002031,7.77e-56,120;CL:0002087,9.45e-53,115;CL:0000037,5.95e-51,168;CL:0002032,1.95e-50,161;CL:0000837,1.95e-50,161;CL:0000988,2.13e-47,177;CL:0000838,3.61e-33,52;CL:0000542,2.31e-32,53;CL:0000051,2.31e-32,53;CL:0000766,3.26e-27,72;CL:0000839,2.97e-23,66;CL:0000557,8.91e-23,67;CL:0000084,2.79e-20,25;CL:0000827,2.79e-20,25;CL:0002194,6.05e-20,59;CL:0000576,6.05e-20,59;CL:0000040,6.05e-20,59;CL:0000559,6.05e-20,59;CL:0000763,9.84e-20,108;CL:0000049,9.84e-20,108;CL:0002009,4.80e-19,61;CL:0000791,2.79e-17,18;CL:0000789,2.79e-17,18;CL:0002420,2.79e-17,18;CL:0002419,2.79e-17,18;CL:0000790,2.79e-17,18;CL:0000625,5.22e-15,11;CL:0000134,2.23e-14,354;CL:0000945,2.35e-14,24;CL:0000826,2.35e-14,24;CL:0002320,9.47e-14,361;CL:0000473,1.56e-12,48;CL:0000234,1.56e-12,48;CL:0000860,6.19e-12,42;CL:0002057,6.19e-12,42;CL:0000219,1.48e-11,386;CL:0000236,4.64e-11,14;CL:0000048,6.46e-09,427;CL:0000723,1.48e-08,433;CL:0000034,4.26e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000051;2.66e-19;53!CL:0000790;2.01e-17;18!CL:0002057;1.12e-09;42!CL:0000049;8.50e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.31e-13!51;DOID:0060083!2.31e-13!51;DOID:1240!4.21e-10!39 | |ontology_enrichment_disease=DOID:2531!2.31e-13!51;DOID:0060083!2.31e-13!51;DOID:1240!4.21e-10!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-43!102;UBERON:0003061!2.76e-43!102;UBERON:0002193!5.71e-41!112;UBERON:0002371!3.42e-30!80;UBERON:0001474!1.15e-26!86;UBERON:0002405!1.59e-24!115;UBERON:0004765!8.56e-20!101;UBERON:0001434!8.56e-20!101;UBERON:0002384!6.67e-18!375;UBERON:0003081!1.26e-09!216;UBERON:0000178!3.74e-08!15;UBERON:0000179!3.74e-08!15;UBERON:0000463!3.74e-08!15;UBERON:0004177!3.67e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!2.76e-43!102;UBERON:0003061!2.76e-43!102;UBERON:0002193!5.71e-41!112;UBERON:0002371!3.42e-30!80;UBERON:0001474!1.15e-26!86;UBERON:0002405!1.59e-24!115;UBERON:0004765!8.56e-20!101;UBERON:0001434!8.56e-20!101;UBERON:0002384!6.67e-18!375;UBERON:0003081!1.26e-09!216;UBERON:0000178!3.74e-08!15;UBERON:0000179!3.74e-08!15;UBERON:0000463!3.74e-08!15;UBERON:0004177!3.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.73e-11;15!UBERON:0000179;5.73e-11;15!UBERON:0000463;5.73e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.01e-32,98;UBERON:0003061,9.01e-32,98;UBERON:0002193,8.94e-31,108;UBERON:0002405,9.96e-22,93;UBERON:0002371,4.70e-19,76;UBERON:0001474,4.92e-17,82;UBERON:0004765,9.02e-15,90;UBERON:0002384,6.75e-13,371;UBERON:0001434,1.80e-12,100;UBERON:0000178,3.43e-11,15;UBERON:0000179,3.43e-11,15;UBERON:0000463,3.43e-11,15;UBERON:0003081,5.97e-10,203;UBERON:0002370,7.43e-09,4;UBERON:0005058,7.43e-09,4;UBERON:0009113,7.43e-09,4;UBERON:0003295,7.43e-09,4;UBERON:0005562,7.43e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,2.05251473624864,2.36132343941038,0.393364276848904,1.15148819429164,0.309632246632152,0,0,0,0.619737604642413,0.284338464974843,0.587200878669695,0.553995408531877,0.601633342410425,1.08505435357926,1.11957737119962,1.29557466407592,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,1.16214518452842,0.411167888021826,0,3.16461631554365,1.7931249457037,3.78371567821736,0.689491361473237,0,0,1.12945403725563,0.272906150057846,0.449446968890169,1.83650335422542,0.641858054152187,0.639337125799041,2.96866170168044,3.59034583718937,3.40979800426155,1.16083695451434,0.56738522469114,0.622822248995575,4.52247597462138,0.521482918420201,2.6062661364614,0.605399502633369,0,0.316462387440884,1.05627643155971,1.06302149982522,1.46761051855863,0.22465726229299,1.50176892841506,0.803627933485401,1.42506371870624,0.79566670879636,0.547992461293902,1.75996244461323,1.63841583378639,0,2.98711155796555,2.40237592221607,0.574752439954483,1.98313461835459,0.954053754535364,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0,0.393419540227666,0.393010762749165,0.411202997999018,0.334372990781356,1.30368906653436,0.946895611469467,0,2.1167986808183,1.76763544484902,0.443067789167242,1.62482318259009,3.45846563259323,4.68213651215562,1.64437904603676,2.76350017785848,2.02862160014537,0.444859689486181,0.802622484269139,0,2.26618685395132,1.14966148080576,1.03088233644789,0.759059076058509,3.50421955756506,2.60433381542567,0,1.35517607169996,2.43174561193395,2.49861453104692,1.4206635122641,4.92676798152628,1.41124720257313,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,1.74129737299267,2.26028532882071,1.66943437013739,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.47730203652438,0.468008530278475,1.48631162288728,0,0,0,0,0,0,0.985326475791887,2.0251139823042,1.4512968087854,1.29707958075265,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.2329365839288,1.37921532141349,0.862510299438069,0.898401253958239,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,4.58782324285425,2.84823593587081,2.85878130549347,2.05681136543097,1.94541993357815,2.70015718619057,3.17250070517708,0,0,0,0.743212700502875,0.144269212976445,0.0711418433484141,0,0.399158742865633,0.191505370132367,1.69338866179106,0,0,2.51058146936511,0.47003968731907,0,0.677167111206413,0.481764225311099,0.605399121573143,0.851692475380653,1.37402137902306,2.15068535015921,0.671028323677248,1.33479313369527,0.976940477010201,0,0,0,0,0,0,0.293016358543788,0,2.45175445410452,0,0,0,0,0,0,0,1.15362711958732,0,0.19924798825107,0.552567831062295,0,0,1.23084805461069,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0.784901281975124,0.831058409500782,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.8402114799552,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.677386656526276,0,0.136203406111576,0,0,0,0.899895566206002,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.427149650270779,0,0.828478110694391,1.48849806543585,0,0.974340787047167,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.930053882193542,0.817826971279221,0,0,0,0.79994958341972,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,1.72850981333669,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.939839179798536,0.773494655682926,0.299823467774787,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,2.45437857376823,2.97958628620118,0,0.0636471582781649,0,0,0.3422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| ||
|short_description=p3@SNX20 | |short_description=p3@SNX20 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p3@SNX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNX20_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000300590, ENST00000413750, ENST00000423026, NM_001144972, NM_153337, NM_182854, uc002egi.3, uc002egk.2, uc010vgp.1_5end |
EntrezGene: | SNX20 |
HGNC: | 30390 |
UniProt: | Q7Z614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.01e-32 | 98 |
blood island | 9.01e-32 | 98 |
hemolymphoid system | 8.94e-31 | 108 |
immune system | 9.96e-22 | 93 |
bone marrow | 4.70e-19 | 76 |
bone element | 4.92e-17 | 82 |
skeletal element | 9.02e-15 | 90 |
connective tissue | 6.75e-13 | 371 |
skeletal system | 1.80e-12 | 100 |
blood | 3.43e-11 | 15 |
haemolymphatic fluid | 3.43e-11 | 15 |
organism substance | 3.43e-11 | 15 |
lateral plate mesoderm | 5.97e-10 | 203 |
thymus | 7.43e-09 | 4 |
hemolymphoid system gland | 7.43e-09 | 4 |
thymic region | 7.43e-09 | 4 |
pharyngeal gland | 7.43e-09 | 4 |
thymus primordium | 7.43e-09 | 4 |