FFCP PHASE1:Hg19::chr4:177190304..177190315,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140458 | |EntrezGene=140458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17180 | |HGNC=17180 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWX0 | |UniProt=Q8WWX0 | ||
|association_with_transcript=-29bp_to_uc003iuq.1_5end | |association_with_transcript=-29bp_to_uc003iuq.1_5end | ||
|cluster_id=chr4:177190304..177190315,- | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_3_at_ASB5_5end | |description=CAGE_peak_3_at_ASB5_5end | ||
|id=chr4:177190304..177190315,- | |id=chr4:177190304..177190315,- | ||
|ontology_enrichment_celltype=CL:0000188!8.61e-24!9;CL:0000515!2.68e-15!4 | |ontology_enrichment_celltype=CL:0000188!8.61e-24!9;CL:0000515!2.68e-15!4 | ||
|ontology_enrichment_celltype_v019=CL:0000056;1.16e-26;4!CL:0000680;3.73e-23;7!CL:0000515;1.07e-20;3!CL:0000188;1.15e-11;9!CL:0002321;1.02e-10;15!CL:0002622;1.53e-09;3!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1!CL:0000222;1.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.28e-26,4;CL:0000188,1.01e-11,9;CL:0002622,1.71e-09,3;CL:0000228,1.04e-07,1;CL:0002372,1.04e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.16e-26;4!UBERON:0004874;5.90e-08;1!UBERON:0009143;1.04e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.10e-12!63;UBERON:0001015!2.10e-12!63;UBERON:0000383!2.10e-12!63;UBERON:0005256!2.61e-12!143;UBERON:0003104!4.18e-12!238;UBERON:0009142!4.18e-12!238;UBERON:0000914!5.22e-12!83;UBERON:0002329!5.22e-12!83;UBERON:0003077!5.22e-12!83;UBERON:0003059!5.22e-12!83;UBERON:0007282!5.22e-12!83;UBERON:0009618!5.22e-12!83;UBERON:0007285!5.22e-12!83;UBERON:0001134!2.79e-11!61;UBERON:0002036!2.79e-11!61;UBERON:0003082!2.79e-11!61;UBERON:0000475!2.52e-10!365;UBERON:0000481!9.23e-10!347;UBERON:0004290!2.40e-09!70;UBERON:0002100!8.54e-09!216;UBERON:0001630!1.03e-08!2;UBERON:0005090!1.03e-08!2;UBERON:0000341!1.54e-08!2;UBERON:0000078!2.42e-08!18;UBERON:0000161!4.63e-08!35;UBERON:0007023!4.71e-08!115;UBERON:0003127!5.40e-08!2;UBERON:0000490!7.65e-08!138;UBERON:0008814!1.20e-07!15;UBERON:0000486!1.90e-07!82;UBERON:0001007!1.95e-07!155;UBERON:0001555!1.95e-07!155;UBERON:0007026!1.95e-07!155;UBERON:0003102!2.09e-07!95 | |ontology_enrichment_uberon=UBERON:0002385!2.10e-12!63;UBERON:0001015!2.10e-12!63;UBERON:0000383!2.10e-12!63;UBERON:0005256!2.61e-12!143;UBERON:0003104!4.18e-12!238;UBERON:0009142!4.18e-12!238;UBERON:0000914!5.22e-12!83;UBERON:0002329!5.22e-12!83;UBERON:0003077!5.22e-12!83;UBERON:0003059!5.22e-12!83;UBERON:0007282!5.22e-12!83;UBERON:0009618!5.22e-12!83;UBERON:0007285!5.22e-12!83;UBERON:0001134!2.79e-11!61;UBERON:0002036!2.79e-11!61;UBERON:0003082!2.79e-11!61;UBERON:0000475!2.52e-10!365;UBERON:0000481!9.23e-10!347;UBERON:0004290!2.40e-09!70;UBERON:0002100!8.54e-09!216;UBERON:0001630!1.03e-08!2;UBERON:0005090!1.03e-08!2;UBERON:0000341!1.54e-08!2;UBERON:0000078!2.42e-08!18;UBERON:0000161!4.63e-08!35;UBERON:0007023!4.71e-08!115;UBERON:0003127!5.40e-08!2;UBERON:0000490!7.65e-08!138;UBERON:0008814!1.20e-07!15;UBERON:0000486!1.90e-07!82;UBERON:0001007!1.95e-07!155;UBERON:0001555!1.95e-07!155;UBERON:0007026!1.95e-07!155;UBERON:0003102!2.09e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.04e-48;16!UBERON:0002036;5.04e-48;16!UBERON:0002385;1.85e-28;31!UBERON:0001015;1.85e-28;31!UBERON:0000383;1.85e-28;31!UBERON:0005090;1.31e-14;2!UBERON:0001630;1.31e-14;2!UBERON:0000341;2.55e-14;2!UBERON:0001723;5.13e-10;3!UBERON:0001033;5.13e-10;3!UBERON:0002426;3.55e-08;1!UBERON:0003831;3.55e-08;1!UBERON:0003898;3.55e-08;1!UBERON:0004830;3.55e-08;1!UBERON:0003830;3.55e-08;1!UBERON:0005175;3.55e-08;1!UBERON:0001774;3.55e-08;1!UBERON:0001103;3.55e-08;1!UBERON:0001389;3.93e-08;1!UBERON:0000026;3.93e-08;1!UBERON:0008784;3.93e-08;1!UBERON:0006058;3.93e-08;1!UBERON:0003663;3.93e-08;1!UBERON:0004256;3.93e-08;1!UBERON:0004708;3.93e-08;1!UBERON:0002101;3.93e-08;1!UBERON:0004709;3.93e-08;1!UBERON:0002529;3.93e-08;1!UBERON:0010538;3.93e-08;1!UBERON:0003661;3.93e-08;1!UBERON:0010890;3.93e-08;1!UBERON:0002471;3.93e-08;1!UBERON:0001383;3.93e-08;1!UBERON:0010758;3.93e-08;1!UBERON:0010707;3.93e-08;1!UBERON:0000978;3.93e-08;1!UBERON:0002103;3.93e-08;1!UBERON:0001665;3.93e-08;1!UBERON:0003823;3.93e-08;1!UBERON:0000154;3.93e-08;1!UBERON:0010709;3.93e-08;1!UBERON:0000989;5.90e-08;1!UBERON:0008811;5.90e-08;1!UBERON:0007029;1.04e-07;1!UBERON:0001301;1.59e-07;1!UBERON:0001282;1.59e-07;1!UBERON:0009842;1.59e-07;1!UBERON:0003704;1.59e-07;1!UBERON:0001171;1.59e-07;1!UBERON:0001172;1.59e-07;1!UBERON:0003101;4.55e-07;22!UBERON:0000079;4.55e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.35e-14,2;UBERON:0001630,1.35e-14,2;UBERON:0000341,2.81e-14,2;UBERON:0005256,1.29e-13,122;UBERON:0002385,1.34e-12,64;UBERON:0001015,1.34e-12,64;UBERON:0000383,1.34e-12,64;UBERON:0001134,6.45e-11,62;UBERON:0002036,6.45e-11,62;UBERON:0003082,6.45e-11,62;UBERON:0001723,5.02e-10,3;UBERON:0001033,5.02e-10,3;UBERON:0010056,5.02e-10,3;UBERON:0003104,1.59e-09,160;UBERON:0009142,1.59e-09,160;UBERON:0002329,2.80e-09,71;UBERON:0003059,2.80e-09,71;UBERON:0007282,2.80e-09,71;UBERON:0004290,2.80e-09,71;UBERON:0009618,2.80e-09,71;UBERON:0003077,4.01e-09,72;UBERON:0007285,4.01e-09,72;UBERON:0002100,5.06e-09,199;UBERON:0007524,5.69e-09,73;UBERON:0007503,2.86e-08,78;UBERON:0002426,3.55e-08,1;UBERON:0003831,3.55e-08,1;UBERON:0003898,3.55e-08,1;UBERON:0004830,3.55e-08,1;UBERON:0003830,3.55e-08,1;UBERON:0005175,3.55e-08,1;UBERON:0001774,3.55e-08,1;UBERON:0001103,3.55e-08,1;UBERON:0010084,3.55e-08,1;UBERON:0005418,4.07e-08,1;UBERON:0001389,4.07e-08,1;UBERON:0000026,4.07e-08,1;UBERON:0008784,4.07e-08,1;UBERON:0006058,4.07e-08,1;UBERON:0003663,4.07e-08,1;UBERON:0004256,4.07e-08,1;UBERON:0004708,4.07e-08,1;UBERON:0002101,4.07e-08,1;UBERON:0004709,4.07e-08,1;UBERON:0002529,4.07e-08,1;UBERON:0010538,4.07e-08,1;UBERON:0003661,4.07e-08,1;UBERON:0010890,4.07e-08,1;UBERON:0002471,4.07e-08,1;UBERON:0001383,4.07e-08,1;UBERON:0004357,4.07e-08,1;UBERON:0004347,4.07e-08,1;UBERON:0005420,4.07e-08,1;UBERON:0005732,4.07e-08,1;UBERON:0010758,4.07e-08,1;UBERON:0010707,4.07e-08,1;UBERON:0000978,4.07e-08,1;UBERON:0002103,4.07e-08,1;UBERON:0001665,4.07e-08,1;UBERON:0003823,4.07e-08,1;UBERON:0000154,4.07e-08,1;UBERON:0010709,4.07e-08,1;UBERON:0005733,4.07e-08,1;UBERON:0005730,4.07e-08,1;UBERON:0000989,5.70e-08,1;UBERON:0008811,5.70e-08,1;UBERON:0006258,5.70e-08,1;UBERON:0005876,5.70e-08,1;UBERON:0004874,5.70e-08,1;UBERON:0007029,9.10e-08,1;UBERON:0003064,1.04e-07,28;UBERON:0000486,1.18e-07,83;UBERON:0000162,1.74e-07,14;UBERON:0001353,1.74e-07,14;UBERON:0000163,1.74e-07,14;UBERON:0006866,1.74e-07,14;UBERON:0000164,1.74e-07,14;UBERON:0000931,1.74e-07,14;UBERON:0001301,1.75e-07,1;UBERON:0001282,1.99e-07,1;UBERON:0009842,1.99e-07,1;UBERON:0003704,1.99e-07,1;UBERON:0001171,1.99e-07,1;UBERON:0001172,1.99e-07,1;UBERON:0003101,4.62e-07,22;UBERON:0000079,4.62e-07,22;UBERON:0004122,5.42e-07,15;UBERON:0000490,6.14e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,8.25253448005201,4.10952645100767,18.6223401769491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24813458209045,0,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22021878777459,0.154048617114644,0.921022048356777,0.827019434907183,0,0.580066775656914,1.70453254832202,5.78708231703793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34030984802508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,12.0386647094818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.90967049465258,0,0.677942222341597,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.801443762484,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64835494986079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0062902321942,19.5059333026869,11.598144313382,2.91426595835484,0,0,0,0,0,0,0,0,0,4.4126697915703,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,5.11761556562354,7.85612623830343,0,0.0620747142958579,0,0.25458863311266,0.404234377916439,6.53150243690884,19.8495314629463,0.134704106029175,0.645499848534087,2.32862249582209,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,8.25253448005201,4.10952645100767,18.6223401769491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24813458209045,0,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22021878777459,0.154048617114644,0.921022048356777,0.827019434907183,0,0.580066775656914,1.70453254832202,5.78708231703793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34030984802508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,12.0386647094818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.90967049465258,0,0.677942222341597,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.801443762484,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64835494986079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0062902321942,19.5059333026869,11.598144313382,2.91426595835484,0,0,0,0,0,0,0,0,0,4.4126697915703,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,5.11761556562354,7.85612623830343,0,0.0620747142958579,0,0.25458863311266,0.404234377916439,6.53150243690884,19.8495314629463,0.134704106029175,0.645499848534087,2.32862249582209,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p3@ASB5 | |short_description=p3@ASB5 | ||
}} | }} |
Latest revision as of 22:19, 16 September 2015
Short description: | p3@ASB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASB5_5end |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | -29bp_to_uc003iuq.1_5end |
EntrezGene: | ASB5 |
HGNC: | 17180 |
UniProt: | Q8WWX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.28e-26 | 4 |
cell of skeletal muscle | 1.01e-11 | 9 |
prostate stromal cell | 1.71e-09 | 3 |
multinucleate cell | 1.04e-07 | 1 |
myotube | 1.04e-07 | 1 |