FFCP PHASE1:Hg19::chr12:122107518..122107540,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283385 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29807 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000392462_5end | |||
|cluster_id=chr12:122107518..122107540,- | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_4_at_MORN3_5end | |||
|id=chr12:122107518..122107540,- | |||
|ontology_enrichment_celltype=CL:0000039!4.68e-24!7;CL:0000586!4.68e-24!7;CL:0002322!2.62e-14!5;CL:0002536!2.92e-10!2;CL:0000223!7.24e-09!59;CL:0000066!5.10e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.81e-25;7!CL:0000586;1.81e-25;7!CL:0002563;3.36e-12;4!CL:0002253;6.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.64e-25,7;CL:0000586,1.64e-25,7;CL:0002563,3.27e-12,4;CL:0002253,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.95e-18;10!UBERON:0005564;5.95e-18;10!UBERON:0003124;9.37e-13;1 | |||
|ontology_enrichment_disease=DOID:305!1.65e-07!106;DOID:0050687!2.46e-07!143;DOID:3095!3.20e-07!22;DOID:2994!3.20e-07!22;DOID:193!9.74e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:1799;7.03e-13;1!DOID:10165;7.03e-13;1!DOID:1798;7.03e-13;1!DOID:178;2.20e-12;1!DOID:326;2.20e-12;1!DOID:3978;2.20e-12;1!DOID:3394;2.20e-12;1!DOID:5844;2.20e-12;1!DOID:3095;2.80e-08;22!DOID:2994;2.80e-08;22!DOID:114;8.06e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.03e-13,1;DOID:10165,7.03e-13,1;DOID:1798,7.03e-13,1;DOID:178,2.46e-12,1;DOID:326,2.46e-12,1;DOID:3978,2.46e-12,1;DOID:3394,2.46e-12,1;DOID:5844,2.46e-12,1;DOID:3095,2.72e-08,22;DOID:2994,2.72e-08,22;DOID:114,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.59e-15!8;UBERON:0003133!1.77e-11!48;UBERON:0005631!2.25e-11!14;UBERON:0000158!2.25e-11!14;UBERON:0003135!1.02e-10!11;UBERON:0005156!1.41e-10!59;UBERON:0000990!1.41e-10!59;UBERON:0000991!1.42e-07!21;UBERON:0009196!1.42e-07!21;UBERON:0009117!1.42e-07!21;UBERON:0005564!1.42e-07!21;UBERON:0000995!2.56e-07!21;UBERON:0003101!2.89e-07!22;UBERON:0000079!2.89e-07!22;UBERON:0004176!3.35e-07!22;UBERON:0005795!5.87e-07!22;UBERON:0003975!5.87e-07!22;UBERON:0002323!9.13e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.35e-22;8!UBERON:0003135;2.39e-16;11!UBERON:0003101;1.69e-12;22!UBERON:0000079;1.69e-12;22!UBERON:0001242;3.36e-12;4!UBERON:0001262;3.36e-12;4!UBERON:0004786;3.36e-12;4!UBERON:0004808;3.36e-12;4!UBERON:0001277;3.36e-12;4!UBERON:0001052;5.40e-12;4!UBERON:0004907;8.88e-10;5!UBERON:0000991;1.13e-08;21!UBERON:0000485;2.41e-07;7!UBERON:0003929;2.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.16e-22,8;UBERON:0003135,2.25e-16,11;UBERON:0003101,1.71e-12,22;UBERON:0000079,1.71e-12,22;UBERON:0001242,3.27e-12,4;UBERON:0001262,3.27e-12,4;UBERON:0004786,3.27e-12,4;UBERON:0004808,3.27e-12,4;UBERON:0001277,3.27e-12,4;UBERON:0001052,5.70e-12,4;UBERON:0004907,9.28e-10,5;UBERON:0000991,1.09e-08,21;UBERON:0009196,1.09e-08,21;UBERON:0009117,1.09e-08,21;UBERON:0005564,1.09e-08,21;UBERON:0005156,1.39e-08,59;UBERON:0000990,1.39e-08,59;UBERON:0004176,2.67e-08,22;UBERON:0003133,5.56e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.10366105501537,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.69169171316418,12.8353431505974,3.15077378573823,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,4.09923907158428,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,2.77695581336209,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,0,0,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7144828371051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9103915300046,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93778776509765,1.3360870263278,0.275684698604535,0,5.07717278062204,10.450601076091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@MORN3 | |||
}} |
Latest revision as of 22:25, 16 September 2015
Short description: | p4@MORN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MORN3_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | 15bp_to_ENST00000392462_5end |
EntrezGene: | MORN3 |
HGNC: | 29807 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.64e-25 | 7 |
germ cell | 1.64e-25 | 7 |
intestinal epithelial cell | 3.27e-12 | 4 |
epithelial cell of large intestine | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.16e-22 | 8 |
male reproductive organ | 2.25e-16 | 11 |
male organism | 1.71e-12 | 22 |
male reproductive system | 1.71e-12 | 22 |
intestinal mucosa | 3.27e-12 | 4 |
wall of intestine | 3.27e-12 | 4 |
gastrointestinal system mucosa | 3.27e-12 | 4 |
gastrointestinal system epithelium | 3.27e-12 | 4 |
intestinal epithelium | 3.27e-12 | 4 |
rectum | 5.70e-12 | 4 |
lower digestive tract | 9.28e-10 | 5 |
gonad | 1.09e-08 | 21 |
indifferent external genitalia | 1.09e-08 | 21 |
indifferent gonad | 1.09e-08 | 21 |
gonad primordium | 1.09e-08 | 21 |
reproductive structure | 1.39e-08 | 59 |
reproductive system | 1.39e-08 | 59 |
external genitalia | 2.67e-08 | 22 |
reproductive organ | 5.56e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.03e-13 | 1 |
endocrine pancreas cancer | 7.03e-13 | 1 |
pancreatic endocrine carcinoma | 7.03e-13 | 1 |
vascular disease | 2.46e-12 | 1 |
ischemia | 2.46e-12 | 1 |
extrinsic cardiomyopathy | 2.46e-12 | 1 |
myocardial ischemia | 2.46e-12 | 1 |
myocardial infarction | 2.46e-12 | 1 |
germ cell and embryonal cancer | 2.72e-08 | 22 |
germ cell cancer | 2.72e-08 | 22 |
heart disease | 8.52e-07 | 2 |