FFCP PHASE1:Hg19::chr2:31360908..31361001,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:31360908..31361001,-
|short_description=p2@GALNT14
|description=CAGE_peak_2_at_GALNT14_5end
|association_with_transcript=0bp_to_ENST00000356174,ENST0000042...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79623 | |EntrezGene=79623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22946 | |HGNC=22946 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FL9 | |UniProt=Q96FL9 | ||
|association_with_transcript=0bp_to_ENST00000356174,ENST00000424136,ENST00000455477_5end | |||
|cluster_id=chr2:31360908..31361001,- | |||
|coexpression_cluster_id=C1902 | |||
|description=CAGE_peak_2_at_GALNT14_5end | |||
|id=chr2:31360908..31361001,- | |||
|ontology_enrichment_celltype=CL:0000066!2.17e-13!254;CL:1000497!7.33e-09!18;CL:0002518!7.33e-09!18;CL:0002368!8.30e-08!13;CL:1000449!9.92e-08!16;CL:1000507!1.40e-07!12;CL:1000494!1.40e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.14e-12;17!CL:0002518;1.14e-12;17!CL:1000449;3.53e-11;15!CL:1000507;1.26e-10;10!CL:1000494;1.26e-10;10!CL:0002368;1.51e-09;13!CL:0002681;1.68e-08;12!CL:0002584;1.68e-08;12!CL:0002202;1.71e-07;9!CL:0002632;1.71e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-16,253;CL:1000497,1.44e-12,17;CL:0002518,1.44e-12,17;CL:1000449,4.32e-11,15;CL:1000507,1.28e-10,10;CL:1000494,1.28e-10,10;CL:0002368,1.54e-09,13;CL:0002681,2.03e-08,12;CL:0002584,2.03e-08,12;CL:0002202,1.76e-07,9;CL:0002632,1.76e-07,9;CL:0002076,2.78e-07,42;CL:0002077,9.13e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!9.92e-08!16;UBERON:0001285!9.92e-08!16;UBERON:0007684!9.92e-08!16;UBERON:0003220!9.92e-08!16;UBERON:0004208!9.92e-08!16;UBERON:0009773!1.40e-07!12;UBERON:0001231!1.40e-07!12;UBERON:0004810!1.40e-07!12;UBERON:0006555!1.56e-07!17;UBERON:0005103!1.56e-07!17;UBERON:0000083!1.56e-07!17;UBERON:0009201!1.56e-07!17;UBERON:0004819!1.56e-07!17;UBERON:0006553!1.56e-07!17;UBERON:0003074!1.56e-07!17;UBERON:0003060!1.56e-07!17;UBERON:0001444!2.48e-07!48;UBERON:0000475!3.04e-07!365;UBERON:0001008!3.32e-07!45;UBERON:0000058!3.99e-07!26;UBERON:0006554!4.52e-07!44;UBERON:0000489!9.23e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.50e-13;30!UBERON:0001008;3.50e-13;30!UBERON:0006555;3.53e-11;15!UBERON:0004819;3.53e-11;15!UBERON:0001285;3.53e-11;15!UBERON:0007684;3.53e-11;15!UBERON:0004211;1.26e-10;10!UBERON:0009773;1.26e-10;10!UBERON:0001231;1.26e-10;10!UBERON:0004810;1.26e-10;10!UBERON:0002113;1.79e-10;24!UBERON:0011143;1.79e-10;24!UBERON:0000489;1.60e-08;29!UBERON:0001225;1.68e-08;12!UBERON:0008987;1.68e-08;12!UBERON:0000353;1.84e-08;15!UBERON:0001851;2.79e-07;15!UBERON:0000165;8.86e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.32e-11,15;UBERON:0009773,4.32e-11,15;UBERON:0001231,4.32e-11,15;UBERON:0001285,4.32e-11,15;UBERON:0007684,4.32e-11,15;UBERON:0004208,4.32e-11,15;UBERON:0004810,1.28e-10,10;UBERON:0006555,4.93e-10,16;UBERON:0004819,4.93e-10,16;UBERON:0002113,4.92e-09,26;UBERON:0003918,4.92e-09,26;UBERON:0011143,4.92e-09,26;UBERON:0005095,4.92e-09,26;UBERON:0007687,4.92e-09,26;UBERON:0001225,2.03e-08,12;UBERON:0008987,2.03e-08,12;UBERON:0000353,2.03e-08,15;UBERON:0000033,4.19e-08,56;UBERON:0005177,6.87e-08,101;UBERON:0001444,8.69e-08,49;UBERON:0000489,1.85e-07,31;UBERON:0000165,2.46e-07,29;UBERON:0000930,2.46e-07,29;UBERON:0001008,2.56e-07,48;UBERON:0001851,3.34e-07,15;UBERON:0006554,3.75e-07,47 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,1.47440361900905,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.958120975510189,0.87879847716362,7.56492716904717,6.89644951379544,7.79236735005425,0,0.383829398097213,0.154816123316076,11.9524759182261,19.277178801808,11.0926203050036,8.21152326151197,17.6289848284403,10.5696158160545,0,0,0.217010870715852,13.2110129801555,5.18229865630367,9.01514486719653,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,3.41527781465669,3.52342313622563,1.91136614062614,0,0.560508562981536,6.58460211937693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0.221729397462564,0.087834785693126,7.98972360536047,12.750335090239,9.64039551239516,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.835979866147242,0.775250277507987,0.71153252537342,0.66944122552934,0.402829317109147,0,0,0,1.62028389576352,0.625098097988558,0.898117490504679,0.900891843866578,0,0,0,1.31780417436063,15.511210565933,9.59406914713576,0,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,4.68642863667593,0,1.1409436430889,0.747243402759005,1.29177948508141,4.04682360920329,3.23036855415172,6.32877930890169,6.38738450021193,3.82305390350332,10.6920257155385,3.4617370098998,0,0,6.39677233025452,6.00568895385428,6.09541054065202,2.63386572528503,1.83892677479412,2.40380894250555,0,1.07633781413317,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0.337552664482532,0.194874010322397,0.252433774244115,0,2.58633690910099,0.355009592516614,0.503760491138201,1.01736355386293,8.11695583285847,8.72787585890671,12.0457930063382,2.31750041646231,1.85541675650079,2.20768491452085,1.65857688024593,1.00928340350251,0.36497735907583,0,1.92972281457866,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,18.4538863656162,0,0,0,0,0,3.54473944008842,0,0,0.686271241194102,5.92651541206578,14.6122279234905,6.53438320675601,13.5179129931453,2.93227474779292,6.23960871167747,0,0.463721619900307,0.70445216541493,0,0,0,0,0,0.984868024349589,0,0.297262324577456,1.87467667973554,8.7350706663407,6.94697976487694,3.40322386270824,6.39394664730716,9.96794965829549,0.492663237895943,0,2.07328115540772,4.17947864909188,1.51490920111656,1.0159663086747,8.78573378784039,3.51652341630141,5.13217338068116,4.01027221542962,9.91132090884928,5.43070221998099,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,0,1.02882949704857,1.41849132023278,1.8649552531127,0.142977993658148,0,1.64648067356154,0.65147236858747,0,1.58390374586686,0,0,0,0,8.53837055434615,0,0,0,1.42636905040718,0,1.84928690295345,0.716243852959582,0,0,0,0,1.77866236955724,0,0,1.50764638800914,0,3.74503511973591,11.966458368161,14.5045429702612,0,0,0,0.623912584592421,2.67643483195743,0.946214490203608,0.117141414992713,0,0,0,0,0.553107505625109,0.434418072340414,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,4.61164881697555,2.11786274552562,0,0,0,36.0959690325929,19.3308496132081,17.2556949218908,30.6892371771847,26.4934588521118,3.4120015221269,3.06168669497728,8.2048048118813,6.16909010761157,10.8378575017541,24.5827989188878,24.2132459392786,21.6079762321468,26.1933463024949,0,0,3.59030175162945,1.64007322849853,0.650756789328606,0.412164046590889,13.1860029338415,17.9870709826882,10.9110452219273,7.80072295243825,0,0.290012154876366,0.616194468458578,0.614014698904518,0.551346289938122,0.322260734604821,1.30515024522806,1.36362603865761,0,5.95025695299521,5.18913181885787,14.5478492243826,2.4277867405332,0,0,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,1.27281299170375,0,0.179872457583315,1.37268514868027,0.471249609382746,0.808729926293264,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,2.72481569187698,0.196498082026242,0.35667105148125,0,0,0,4.9331512589543,1.74967360122491,16.0690928251605,12.0654409596442,15.2447378805852,0.564862804660675,9.04061282609583,15.1624328100863,13.3029046061003,10.1078296091062,1.52234282769651,0.764637207142375,2.27858874869665,0.952927101831156,1.23408681925858,3.24236655596359,2.16012574895246,0.79312517629427,0,0,13.7222520949378,1.48642540100575,6.92492222286935,0,0.318852545457645,13.7709766288643,0,0,16.5557189540023,12.3550758369922,0,0.47003968731907,27.5697924799074,0,0,0,0.851692475380653,0,0.307240764308458,0,0.166849141711909,16.9987642999775,0,0,0,0,0,6.36277837387947,0.586032717087576,7.16027078322129,0,4.2620422020962,0,0,0,0,0.562677665642051,4.56365690593914,5.27372397525631,0.211125408127993,0,0.828851746593443,11.0850409055881,0,2.33861130376032,0,8.5374933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| ||
|short_description=p2@GALNT14 | |||
}} | }} |
Latest revision as of 22:33, 16 September 2015
Short description: | p2@GALNT14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GALNT14_5end |
Coexpression cluster: | C1902_Renal_normal_renal_mesothelioma_clear_epidermoid_kidney |
Association with transcript: | 0bp_to_ENST00000356174, ENST00000424136, ENST00000455477_5end |
EntrezGene: | GALNT14 |
HGNC: | 22946 |
UniProt: | Q96FL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-16 | 253 |
kidney cell | 1.44e-12 | 17 |
kidney epithelial cell | 1.44e-12 | 17 |
epithelial cell of nephron | 4.32e-11 | 15 |
kidney tubule cell | 1.28e-10 | 10 |
nephron tubule epithelial cell | 1.28e-10 | 10 |
respiratory epithelial cell | 1.54e-09 | 13 |
kidney cortical cell | 2.03e-08 | 12 |
renal cortical epithelial cell | 2.03e-08 | 12 |
epithelial cell of tracheobronchial tree | 1.76e-07 | 9 |
epithelial cell of lower respiratory tract | 1.76e-07 | 9 |
endo-epithelial cell | 2.78e-07 | 42 |
ecto-epithelial cell | 9.13e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.32e-11 | 15 |
renal tubule | 4.32e-11 | 15 |
nephron tubule | 4.32e-11 | 15 |
nephron | 4.32e-11 | 15 |
uriniferous tubule | 4.32e-11 | 15 |
nephrogenic mesenchyme | 4.32e-11 | 15 |
nephron tubule epithelium | 1.28e-10 | 10 |
excretory tube | 4.93e-10 | 16 |
kidney epithelium | 4.93e-10 | 16 |
kidney | 4.92e-09 | 26 |
kidney mesenchyme | 4.92e-09 | 26 |
upper urinary tract | 4.92e-09 | 26 |
kidney rudiment | 4.92e-09 | 26 |
kidney field | 4.92e-09 | 26 |
cortex of kidney | 2.03e-08 | 12 |
renal parenchyma | 2.03e-08 | 12 |
parenchyma | 2.03e-08 | 15 |
head | 4.19e-08 | 56 |
trunk region element | 6.87e-08 | 101 |
subdivision of head | 8.69e-08 | 49 |
cavitated compound organ | 1.85e-07 | 31 |
mouth | 2.46e-07 | 29 |
stomodeum | 2.46e-07 | 29 |
renal system | 2.56e-07 | 48 |
cortex | 3.34e-07 | 15 |
urinary system structure | 3.75e-07 | 47 |