FFCP PHASE1:Hg19::chr10:129845823..129845863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000306042_5end | |association_with_transcript=0bp_to_ENST00000306042_5end | ||
|cluster_id=chr10:129845823..129845863,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_PTPRE_5end | |description=CAGE_peak_2_at_PTPRE_5end | ||
|id=chr10:129845823..129845863,+ | |id=chr10:129845823..129845863,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.44e-58!140;CL:0000037!2.12e-57!172;CL:0000566!2.12e-57!172;CL:0000988!1.15e-53!182;CL:0002032!7.92e-53!165;CL:0000837!7.92e-53!165;CL:0002087!6.14e-48!119;CL:0002031!8.42e-48!124;CL:0000766!1.22e-35!76;CL:0000763!7.29e-34!112;CL:0000049!7.29e-34!112;CL:0000557!1.76e-31!71;CL:0002009!4.75e-30!65;CL:0000839!1.48e-29!70;CL:0002194!4.34e-29!63;CL:0000576!4.34e-29!63;CL:0000040!4.34e-29!63;CL:0000559!4.34e-29!63;CL:0002057!2.79e-27!42;CL:0000860!2.61e-23!45;CL:0000542!2.37e-16!53;CL:0000051!2.37e-16!53;CL:0000838!3.22e-16!52;CL:0000084!1.23e-10!25;CL:0000827!1.23e-10!25;CL:0000791!1.27e-09!18;CL:0000789!1.27e-09!18;CL:0002420!1.27e-09!18;CL:0002419!1.27e-09!18;CL:0000790!1.27e-09!18;CL:0002320!1.76e-07!365;CL:0000134!2.88e-07!358;CL:0000094!3.84e-07!8;CL:0000625!7.80e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.44e-58!140;CL:0000037!2.12e-57!172;CL:0000566!2.12e-57!172;CL:0000988!1.15e-53!182;CL:0002032!7.92e-53!165;CL:0000837!7.92e-53!165;CL:0002087!6.14e-48!119;CL:0002031!8.42e-48!124;CL:0000766!1.22e-35!76;CL:0000763!7.29e-34!112;CL:0000049!7.29e-34!112;CL:0000557!1.76e-31!71;CL:0002009!4.75e-30!65;CL:0000839!1.48e-29!70;CL:0002194!4.34e-29!63;CL:0000576!4.34e-29!63;CL:0000040!4.34e-29!63;CL:0000559!4.34e-29!63;CL:0002057!2.79e-27!42;CL:0000860!2.61e-23!45;CL:0000542!2.37e-16!53;CL:0000051!2.37e-16!53;CL:0000838!3.22e-16!52;CL:0000084!1.23e-10!25;CL:0000827!1.23e-10!25;CL:0000791!1.27e-09!18;CL:0000789!1.27e-09!18;CL:0002420!1.27e-09!18;CL:0002419!1.27e-09!18;CL:0000790!1.27e-09!18;CL:0002320!1.76e-07!365;CL:0000134!2.88e-07!358;CL:0000094!3.84e-07!8;CL:0000625!7.80e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.11e-22;33!CL:0002057;4.11e-22;33!CL:0000473;2.55e-21;39!CL:0000234;2.55e-21;39!CL:0000576;1.67e-19;48!CL:0000766;5.27e-18;69!CL:0002087;6.32e-15;104!CL:0000738;6.36e-14;136!CL:0000763;8.30e-12;100!CL:0000084;1.69e-11;25!CL:0000542;8.97e-11;53!CL:0000988;1.06e-10;177!CL:0000791;1.73e-10;18!CL:0000789;1.73e-10;18!CL:0002419;1.73e-10;18!CL:0000094;1.01e-07;8!CL:0000625;2.19e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-67,136;CL:0000037,3.27e-67,168;CL:0002032,4.60e-62,161;CL:0000837,4.60e-62,161;CL:0000988,1.06e-61,177;CL:0002087,1.51e-56,115;CL:0002031,6.39e-56,120;CL:0000766,1.96e-43,72;CL:0000763,2.84e-41,108;CL:0000049,2.84e-41,108;CL:0000557,1.11e-38,67;CL:0002009,1.24e-37,61;CL:0002194,1.42e-36,59;CL:0000576,1.42e-36,59;CL:0000040,1.42e-36,59;CL:0000559,1.42e-36,59;CL:0000839,2.06e-36,66;CL:0000473,3.49e-33,48;CL:0000234,3.49e-33,48;CL:0000860,6.77e-30,42;CL:0002057,6.77e-30,42;CL:0000542,1.25e-17,53;CL:0000051,1.25e-17,53;CL:0000838,1.75e-17,52;CL:0000084,1.48e-11,25;CL:0000827,1.48e-11,25;CL:0000791,1.93e-10,18;CL:0000789,1.93e-10,18;CL:0002420,1.93e-10,18;CL:0002419,1.93e-10,18;CL:0000790,1.93e-10,18;CL:0000134,1.61e-09,354;CL:0002320,2.40e-09,361;CL:0000094,1.04e-07,8;CL:0000625,2.27e-07,11;CL:0002393,4.31e-07,9;CL:0002397,4.31e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-21;42!CL:0000049;1.30e-11;108!CL:0000051;8.97e-11;53!CL:0000790;1.73e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-39!102;UBERON:0003061!2.37e-39!102;UBERON:0002193!9.90e-35!112;UBERON:0002371!9.71e-31!80;UBERON:0001474!3.74e-26!86;UBERON:0004765!2.91e-21!101;UBERON:0001434!2.91e-21!101;UBERON:0002405!2.30e-19!115;UBERON:0003081!1.79e-09!216;UBERON:0000178!7.82e-07!15;UBERON:0000179!7.82e-07!15;UBERON:0000463!7.82e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.37e-39!102;UBERON:0003061!2.37e-39!102;UBERON:0002193!9.90e-35!112;UBERON:0002371!9.71e-31!80;UBERON:0001474!3.74e-26!86;UBERON:0004765!2.91e-21!101;UBERON:0001434!2.91e-21!101;UBERON:0002405!2.30e-19!115;UBERON:0003081!1.79e-09!216;UBERON:0000178!7.82e-07!15;UBERON:0000179!7.82e-07!15;UBERON:0000463!7.82e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;6.77e-08;32!UBERON:0000178;6.28e-07;15!UBERON:0000179;6.28e-07;15!UBERON:0000463;6.28e-07;15 | |||
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| ||
|short_description=p2@PTPRE | |short_description=p2@PTPRE | ||
}} | }} |
Latest revision as of 01:47, 17 September 2015
Short description: | p2@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000306042_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.12e-46 | 98 |
blood island | 6.12e-46 | 98 |
hemolymphoid system | 6.75e-41 | 108 |
bone marrow | 4.79e-37 | 76 |
immune system | 1.34e-34 | 93 |
skeletal element | 2.17e-32 | 90 |
bone element | 2.45e-32 | 82 |
skeletal system | 3.66e-25 | 100 |
lateral plate mesoderm | 3.55e-10 | 203 |
connective tissue | 1.43e-08 | 371 |
blood | 7.34e-07 | 15 |
haemolymphatic fluid | 7.34e-07 | 15 |
organism substance | 7.34e-07 | 15 |