FFCP PHASE1:Hg19::chr12:12397368..12397385,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12397368..12397385,- to FFCP PHASE1:Hg19::chr12:12397368..12397385,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4040 | |EntrezGene=4040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6698 | |HGNC=6698 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000538239_5end | |||
|cluster_id=chr12:12397368..12397385,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_LRP6_5end | |||
|id=chr12:12397368..12397385,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.15e-18;2!UBERON:0006601;5.38e-11;82!UBERON:0006222;1.64e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.76e-55!57;UBERON:0005068!6.76e-55!57;UBERON:0006241!6.76e-55!57;UBERON:0007135!6.76e-55!57;UBERON:0002616!1.24e-46!59;UBERON:0000955!3.51e-45!69;UBERON:0006238!3.51e-45!69;UBERON:0002780!1.31e-44!41;UBERON:0001890!1.31e-44!41;UBERON:0006240!1.31e-44!41;UBERON:0003080!2.32e-43!42;UBERON:0001893!2.82e-43!34;UBERON:0001017!3.63e-43!82;UBERON:0002020!5.19e-43!34;UBERON:0003528!5.19e-43!34;UBERON:0002791!4.54e-41!33;UBERON:0005743!1.24e-40!86;UBERON:0001869!6.44e-39!32;UBERON:0003075!1.27e-36!86;UBERON:0007284!1.27e-36!86;UBERON:0000073!1.06e-35!94;UBERON:0001016!1.06e-35!94;UBERON:0002346!1.74e-34!90;UBERON:0003056!2.72e-29!61;UBERON:0002619!4.64e-28!22;UBERON:0007023!7.36e-28!115;UBERON:0001950!2.34e-27!20;UBERON:0000033!1.20e-24!123;UBERON:0000956!2.99e-24!25;UBERON:0000203!2.99e-24!25;UBERON:0000153!5.72e-23!129;UBERON:0007811!5.72e-23!129;UBERON:0002308!3.18e-22!9;UBERON:0000125!3.18e-22!9;UBERON:0004121!6.01e-19!169;UBERON:0000924!3.14e-18!173;UBERON:0006601!3.14e-18!173;UBERON:0009663!7.38e-18!7;UBERON:0002420!8.43e-18!9;UBERON:0007245!8.43e-18!9;UBERON:0010009!8.43e-18!9;UBERON:0010011!8.43e-18!9;UBERON:0000454!8.43e-18!9;UBERON:0002298!3.33e-15!8;UBERON:0000025!1.83e-12!194;UBERON:0003076!2.27e-12!15;UBERON:0003057!2.27e-12!15;UBERON:0000475!1.59e-11!365;UBERON:0001871!4.66e-11!7;UBERON:0000369!9.99e-11!4;UBERON:0002435!9.99e-11!4;UBERON:0000204!9.99e-11!4;UBERON:0010082!9.99e-11!4;UBERON:0000200!1.22e-10!6;UBERON:0004111!9.41e-10!241;UBERON:0004733!1.19e-09!12;UBERON:0002028!1.19e-09!12;UBERON:0007277!1.19e-09!12;UBERON:0004732!8.17e-09!13;UBERON:0000483!1.09e-08!309;UBERON:0001872!1.61e-08!5;UBERON:0000988!1.66e-08!3;UBERON:0001896!1.66e-08!3;UBERON:0005290!1.66e-08!3;UBERON:0010096!1.66e-08!3;UBERON:0000119!1.75e-08!312;UBERON:0006331!2.71e-08!3;UBERON:0005383!3.07e-08!3;UBERON:0005382!3.07e-08!3;UBERON:0002021!4.33e-08!5;UBERON:0000064!4.47e-08!219;UBERON:0002771!4.63e-08!3;UBERON:0000477!4.81e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.07e-51;41!UBERON:0001890;1.07e-51;41!UBERON:0001869;2.03e-44;32!UBERON:0001893;2.11e-44;34!UBERON:0002791;5.58e-39;32!UBERON:0000073;1.14e-35;53!UBERON:0002616;1.14e-35;53!UBERON:0003528;2.60e-35;34!UBERON:0002020;2.60e-35;34!UBERON:0002420;1.67e-34;9!UBERON:0007245;1.67e-34;9!UBERON:0010009;1.67e-34;9!UBERON:0010011;1.67e-34;9!UBERON:0000454;1.67e-34;9!UBERON:0009663;3.30e-31;7!UBERON:0000125;2.84e-24;9!UBERON:0002308;2.84e-24;9!UBERON:0002619;6.41e-23;22!UBERON:0000369;2.62e-20;4!UBERON:0002435;2.62e-20;4!UBERON:0000204;2.62e-20;4!UBERON:0000956;3.63e-20;25!UBERON:0000203;3.63e-20;25!UBERON:0001017;1.58e-19;75!UBERON:0001950;2.33e-19;20!UBERON:0000955;4.22e-19;68!UBERON:0001016;4.95e-19;83!UBERON:0001897;1.19e-18;2!UBERON:0001875;1.19e-18;2!UBERON:0006514;1.19e-18;2!UBERON:0010225;1.19e-18;2!UBERON:0001873;3.15e-18;2!UBERON:0000349;2.26e-16;5!UBERON:0007023;1.92e-13;114!UBERON:0005383;1.78e-12;3!UBERON:0005382;1.78e-12;3!UBERON:0001894;4.48e-12;7!UBERON:0001882;2.06e-10;1!UBERON:0005403;2.06e-10;1!UBERON:0002581;5.53e-10;1!UBERON:0002902;5.53e-10;1!UBERON:0002022;5.53e-10;1!UBERON:0002336;5.53e-10;1!UBERON:0011215;5.53e-10;1!UBERON:0001018;5.53e-10;1!UBERON:0002473;5.53e-10;1!UBERON:0005340;5.53e-10;1!UBERON:0003544;5.53e-10;1!UBERON:0005970;5.53e-10;1!UBERON:0009899;5.53e-10;1!UBERON:0002316;5.53e-10;1!UBERON:0001020;5.53e-10;1!UBERON:0007190;5.53e-10;1!UBERON:0002437;5.53e-10;1!UBERON:0002784;8.62e-10;4!UBERON:0011216;5.58e-09;132!UBERON:0001872;7.76e-08;5!UBERON:0002298;8.38e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.88e-64,56;UBERON:0005068,4.88e-64,56;UBERON:0006241,4.88e-64,56;UBERON:0007135,4.88e-64,56;UBERON:0002780,5.08e-64,41;UBERON:0001890,5.08e-64,41;UBERON:0003080,5.08e-64,41;UBERON:0006240,5.08e-64,41;UBERON:0000073,2.33e-61,53;UBERON:0002616,2.33e-61,53;UBERON:0001893,5.37e-53,34;UBERON:0000955,1.19e-51,68;UBERON:0006238,1.19e-51,68;UBERON:0001869,6.10e-49,32;UBERON:0001017,1.85e-47,81;UBERON:0003075,4.90e-43,82;UBERON:0007284,4.90e-43,82;UBERON:0001016,1.62e-42,89;UBERON:0003056,1.80e-42,61;UBERON:0002791,3.83e-42,32;UBERON:0002346,6.45e-41,86;UBERON:0003528,1.28e-39,34;UBERON:0002020,1.28e-39,34;UBERON:0002420,1.25e-34,9;UBERON:0007245,1.25e-34,9;UBERON:0010009,1.25e-34,9;UBERON:0010011,1.25e-34,9;UBERON:0000454,1.25e-34,9;UBERON:0010371,2.26e-33,104;UBERON:0009663,2.67e-31,7;UBERON:0007023,1.64e-30,114;UBERON:0010314,1.10e-25,132;UBERON:0000125,2.42e-24,9;UBERON:0002308,2.42e-24,9;UBERON:0002619,5.89e-23,22;UBERON:0004121,5.62e-21,171;UBERON:0000924,5.62e-21,171;UBERON:0006601,5.62e-21,171;UBERON:0000369,2.91e-20,4;UBERON:0002435,2.91e-20,4;UBERON:0000204,2.91e-20,4;UBERON:0010082,2.91e-20,4;UBERON:0000956,3.37e-20,25;UBERON:0000203,3.37e-20,25;UBERON:0001950,2.06e-19,20;UBERON:0001875,7.68e-19,2;UBERON:0006514,7.68e-19,2;UBERON:0001897,1.00e-18,2;UBERON:0010225,1.00e-18,2;UBERON:0001873,3.45e-18,2;UBERON:0010122,3.45e-18,2;UBERON:0011216,5.58e-17,223;UBERON:0000025,1.08e-16,192;UBERON:0000349,2.33e-16,5;UBERON:0004111,1.06e-12,240;UBERON:0005383,1.89e-12,3;UBERON:0005382,1.89e-12,3;UBERON:0001894,4.16e-12,7;UBERON:0006222,4.16e-12,7;UBERON:0001882,2.16e-10,1;UBERON:0005403,2.16e-10,1;UBERON:0002581,2.59e-10,1;UBERON:0002022,3.40e-10,1;UBERON:0002336,4.44e-10,1;UBERON:0011215,4.44e-10,1;UBERON:0001018,4.44e-10,1;UBERON:0002473,4.44e-10,1;UBERON:0005340,4.44e-10,1;UBERON:0003544,4.44e-10,1;UBERON:0005970,4.44e-10,1;UBERON:0002316,4.44e-10,1;UBERON:0001020,4.44e-10,1;UBERON:0002437,4.44e-10,1;UBERON:0007190,6.91e-10,1;UBERON:0002784,7.91e-10,4;UBERON:0002902,9.82e-10,1;UBERON:0009899,9.82e-10,1;UBERON:0000483,3.10e-09,306;UBERON:0000119,4.12e-09,309;UBERON:0001872,7.51e-08,5;UBERON:0002298,7.05e-07,6;UBERON:0000200,9.69e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,1.48428957058962,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.20596438625408,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,3.27970224015475,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,1.89932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.46429682005587,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0.415440338029185,0,0,1.88323625639876,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.625954653532499,0.573409195690071,0.887432412294818,2.29756690883119,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31225210347254,0,0.319267718114302,0.82046545696302,0.252071696221718,1.1756732918917,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,1.2156765231311,0,0.620060389503552,1.07806877329642,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,1.97112225632812,1.97318320688547,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,1.17785080268967,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.951880862672806,0,1.0580536810308,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0,0,2.48750831837634,1.55149493792843,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,1.48428957058962,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.20596438625408,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,3.27970224015475,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,1.89932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.46429682005587,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0.415440338029185,0,0,1.88323625639876,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.625954653532499,0.573409195690071,0.887432412294818,2.29756690883119,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31225210347254,0,0.319267718114302,0.82046545696302,0.252071696221718,1.1756732918917,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,1.2156765231311,0,0.620060389503552,1.07806877329642,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,1.97112225632812,1.97318320688547,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,1.17785080268967,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.951880862672806,0,1.0580536810308,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0,0,2.48750831837634,1.55149493792843,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p9@LRP6 | |||
}} | }} |
Latest revision as of 02:29, 17 September 2015
Short description: | p9@LRP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LRP6_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -130bp_to_ENST00000538239_5end |
EntrezGene: | LRP6 |
HGNC: | 6698 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data