FFCP PHASE1:Hg19::chr2:138722016..138722027,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:138722016..138722027,+ to FFCP PHASE1:Hg19::chr2:138722016..138722027,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3176 | |EntrezGene=3176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5028 | |HGNC=5028 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRW6 | |UniProt=Q9BRW6 | ||
|association_with_transcript=-15bp_to_ENST00000280096_5end | |||
|cluster_id=chr2:138722016..138722027,+ | |||
|description=CAGE_peak_3_at_HNMT_5end | |||
|id=chr2:138722016..138722027,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.25e-11!65;CL:0002194!2.06e-11!63;CL:0000576!2.06e-11!63;CL:0000040!2.06e-11!63;CL:0000559!2.06e-11!63;CL:0000860!1.38e-09!45;CL:0000557!6.53e-09!71;CL:0002057!1.11e-08!42;CL:0000839!2.96e-08!70;CL:0000766!9.14e-07!76 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.69e-09,59;CL:0000576,3.69e-09,59;CL:0000040,3.69e-09,59;CL:0000559,3.69e-09,59;CL:0002009,4.53e-09,61;CL:0000557,3.04e-07,67;CL:0000473,4.42e-07,48;CL:0000234,4.42e-07,48;CL:0000839,5.17e-07,66;CL:0000182,9.69e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.69e-08;11!UBERON:0009497;4.70e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!2.81e-12!511;UBERON:0007023!4.56e-11!115;UBERON:0000468!9.66e-11!659;UBERON:0000922!2.58e-09!612;UBERON:0002050!3.15e-09!605;UBERON:0005423!3.15e-09!605;UBERON:0000923!5.16e-09!604;UBERON:0005291!5.16e-09!604;UBERON:0006598!5.16e-09!604;UBERON:0002532!5.16e-09!604;UBERON:0001017!1.01e-08!82;UBERON:0000467!1.11e-08!625;UBERON:0000480!1.25e-08!626;UBERON:0005743!1.66e-08!86;UBERON:0002405!4.70e-08!115;UBERON:0001049!6.02e-08!57;UBERON:0005068!6.02e-08!57;UBERON:0006241!6.02e-08!57;UBERON:0007135!6.02e-08!57;UBERON:0002616!1.54e-07!59;UBERON:0002371!2.06e-07!80;UBERON:0000073!3.08e-07!94;UBERON:0001016!3.08e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.54e-11,223;UBERON:0007023,5.80e-10,114;UBERON:0001017,3.60e-08,81;UBERON:0001049,2.01e-07,56;UBERON:0005068,2.01e-07,56;UBERON:0006241,2.01e-07,56;UBERON:0007135,2.01e-07,56;UBERON:0001016,6.82e-07,89 | |||
|phase1_expression=4.72363786103447,4.71021152560163,4.08767771878316,0,1.34088328328186,0.872338524100369,0,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0,0.495065411840187,0.662794751455832,0,1.80808358407193,0,0,0,0.204000691244253,0,2.0036519099174,1.77936752594749,0.251085279189606,0,0,0,0,1.15148819429164,0.464448369948228,0.919421224478927,0,0,0,0,0.293600439334847,1.10799081706375,0.802177789880567,1.51907609501096,2.23915474239924,6.47787332037959,2.31818010870768,2.18097358169347,1.88937971844405,0.242584061187816,0.464858073811369,0.822335776043652,1.54853185447552,0.575384784644301,0.768482119587302,0.945928919554341,2.75796544589295,1.29096936716765,2.70852973188684,1.31769637679823,1.63743690034707,1.34834090667051,2.44867113896722,0.962787081228281,0.639337125799041,0.659702600373432,1.39624560335142,0.426224750532694,2.03146467040009,1.70215567407342,1.24564449799115,0.251248665256743,3.65038042894141,1.08594422352558,1.21079900526674,1.10483290796269,1.58231193720442,2.11255286311942,2.33864729961548,1.04829322754188,3.48218756554135,2.55300717830561,2.4108838004562,2.28010194992999,0.99458338599545,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,9.75227465255847,2.68280343881454,0.895037932904712,1.0843174571537,0.50133791063589,1.59331170856906,0,0.486634870302636,0.756278537312543,0.443458794925128,0.43917392846563,1.76821751921912,0,0,0.649094787309367,0.522389211897802,0.797747763113191,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,1.69669483739752,0.673588117878509,0.788280363383256,0,0,0.183201743930407,0,0,0,1.49091585508596,0.379891534993739,0.529636723252875,1.14734648299525,0.709336764396714,0,1.06748995729705,0,1.55605517699883,0.942974704487816,0.980771418680752,0.302714855289863,1.15235184896,0,1.24864030732128,0,1.19558944441441,0.469737994575059,0.647491777472526,0.98315564691574,0.408308342509787,0.368502951935304,0.413303124703062,0,0.989067717114227,0,0.718618141816238,0.673344455816265,0.375355559615893,0.554128230968366,0.438977620880838,0.612975591598039,1.20190447125277,0.794025282120147,0.358779271377724,1.2813443329114,0.635795703478686,0,0.721367704669072,1.8034837803194,1.30281799432113,0.506328996723799,0.194874010322397,0.252433774244115,1.01254888506529,1.13152239773168,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,1.26160425437814,0.72995471815166,0,0.643240938192885,0,6.50115099244771,0,0.709840800239063,1.18009283054671,1.68707720918437,1.10293972732394,1.74303555273925,1.18635309555548,1.34831308160164,1.17732879075208,1.53898862778556,0,0,0.4115740113314,0,13.9430538304014,5.89696330006576,2.95394953340702,0,7.2563178740437,0.686271241194102,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0.761016608938393,0.790204397959275,3.43394464837949,5.66299114001014,1.40402559083543,2.82399208348584,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0,2.53991577168676,1.14596527667483,0,1.71072446022705,0.822619941626588,2.70308752059526,4.85904935471983,0,0.43596006883328,0.8800594298514,0.387815147273333,0,0.845302752556,0.26593811658487,4.16029747645464,0.514414748524284,0,0.266422179016099,1.71573592389777,0.542621605391443,0,2.60588947434988,0.710783897485092,0.791951872933429,1.80863626235752,0.871533458600294,1.19967589418468,0,1.00451418286425,0,0,0,0,1.15825045334063,2.05476322550383,0.895304816199478,0,0,0,0.128343036279748,4.57370323600434,0,1.54657762555539,4.18790663335872,2.55175500661265,0,0,0,1.59498939234882,2.50085260529839,0.542530047399471,2.49565033836969,0.356857977594324,2.05013139544115,2.45996971484698,1.20378439891088,2.27407504055985,0,0,0.553107505625109,0.868836144680828,0,0,0.620304078368662,1.2942852049117,0,0,0,0.30239029332968,0.744323423456331,3.06923946576125,2.80660094433074,2.17836553734692,0.511707249066704,1.28683136914886,0,1.07946785661859,0.532685175939381,0.821271560138091,1.03850885836724,0.813472649219715,3.74664293734029,0.40101294060657,0.0920809889358963,2.87036120411517,0.728364672026868,1.83574180943194,0,0,0,0,1.05551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0,7.93415789687461,0.54941678891006,0.41254749960294,0,0,3.21367859688319,0.096670718292122,2.46477787383431,2.45605879561807,1.10269257987624,3.33002759091648,1.45016693914229,1.36362603865761,0.356128142586949,0,0,0.765676274967505,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,1.48863347743867,2.21465597303108,1.14378116354295,0,1.28381696410176,0.636406495851874,0.78494864019923,2.69808686374972,3.29444435683266,2.00281083987667,0.202182481573316,0,0.421258456238981,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|phase1_expression=4.72363786103447,4.71021152560163,4.08767771878316,0,1.34088328328186,0.872338524100369,0,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0,0.495065411840187,0.662794751455832,0,1.80808358407193,0,0,0,0.204000691244253,0,2.0036519099174,1.77936752594749,0.251085279189606,0,0,0,0,1.15148819429164,0.464448369948228,0.919421224478927,0,0,0,0,0.293600439334847,1.10799081706375,0.802177789880567,1.51907609501096,2.23915474239924,6.47787332037959,2.31818010870768,2.18097358169347,1.88937971844405,0.242584061187816,0.464858073811369,0.822335776043652,1.54853185447552,0.575384784644301,0.768482119587302,0.945928919554341,2.75796544589295,1.29096936716765,2.70852973188684,1.31769637679823,1.63743690034707,1.34834090667051,2.44867113896722,0.962787081228281,0.639337125799041,0.659702600373432,1.39624560335142,0.426224750532694,2.03146467040009,1.70215567407342,1.24564449799115,0.251248665256743,3.65038042894141,1.08594422352558,1.21079900526674,1.10483290796269,1.58231193720442,2.11255286311942,2.33864729961548,1.04829322754188,3.48218756554135,2.55300717830561,2.4108838004562,2.28010194992999,0.99458338599545,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,9.75227465255847,2.68280343881454,0.895037932904712,1.0843174571537,0.50133791063589,1.59331170856906,0,0.486634870302636,0.756278537312543,0.443458794925128,0.43917392846563,1.76821751921912,0,0,0.649094787309367,0.522389211897802,0.797747763113191,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,1.69669483739752,0.673588117878509,0.788280363383256,0,0,0.183201743930407,0,0,0,1.49091585508596,0.379891534993739,0.529636723252875,1.14734648299525,0.709336764396714,0,1.06748995729705,0,1.55605517699883,0.942974704487816,0.980771418680752,0.302714855289863,1.15235184896,0,1.24864030732128,0,1.19558944441441,0.469737994575059,0.647491777472526,0.98315564691574,0.408308342509787,0.368502951935304,0.413303124703062,0,0.989067717114227,0,0.718618141816238,0.673344455816265,0.375355559615893,0.554128230968366,0.438977620880838,0.612975591598039,1.20190447125277,0.794025282120147,0.358779271377724,1.2813443329114,0.635795703478686,0,0.721367704669072,1.8034837803194,1.30281799432113,0.506328996723799,0.194874010322397,0.252433774244115,1.01254888506529,1.13152239773168,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,1.26160425437814,0.72995471815166,0,0.643240938192885,0,6.50115099244771,0,0.709840800239063,1.18009283054671,1.68707720918437,1.10293972732394,1.74303555273925,1.18635309555548,1.34831308160164,1.17732879075208,1.53898862778556,0,0,0.4115740113314,0,13.9430538304014,5.89696330006576,2.95394953340702,0,7.2563178740437,0.686271241194102,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0.761016608938393,0.790204397959275,3.43394464837949,5.66299114001014,1.40402559083543,2.82399208348584,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0,2.53991577168676,1.14596527667483,0,1.71072446022705,0.822619941626588,2.70308752059526,4.85904935471983,0,0.43596006883328,0.8800594298514,0.387815147273333,0,0.845302752556,0.26593811658487,4.16029747645464,0.514414748524284,0,0.266422179016099,1.71573592389777,0.542621605391443,0,2.60588947434988,0.710783897485092,0.791951872933429,1.80863626235752,0.871533458600294,1.19967589418468,0,1.00451418286425,0,0,0,0,1.15825045334063,2.05476322550383,0.895304816199478,0,0,0,0.128343036279748,4.57370323600434,0,1.54657762555539,4.18790663335872,2.55175500661265,0,0,0,1.59498939234882,2.50085260529839,0.542530047399471,2.49565033836969,0.356857977594324,2.05013139544115,2.45996971484698,1.20378439891088,2.27407504055985,0,0,0.553107505625109,0.868836144680828,0,0,0.620304078368662,1.2942852049117,0,0,0,0.30239029332968,0.744323423456331,3.06923946576125,2.80660094433074,2.17836553734692,0.511707249066704,1.28683136914886,0,1.07946785661859,0.532685175939381,0.821271560138091,1.03850885836724,0.813472649219715,3.74664293734029,0.40101294060657,0.0920809889358963,2.87036120411517,0.728364672026868,1.83574180943194,0,0,0,0,1.05551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0,7.93415789687461,0.54941678891006,0.41254749960294,0,0,3.21367859688319,0.096670718292122,2.46477787383431,2.45605879561807,1.10269257987624,3.33002759091648,1.45016693914229,1.36362603865761,0.356128142586949,0,0,0.765676274967505,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,1.48863347743867,2.21465597303108,1.14378116354295,0,1.28381696410176,0.636406495851874,0.78494864019923,2.69808686374972,3.29444435683266,2.00281083987667,0.202182481573316,0,0.421258456238981,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| ||
|short_description=p3@HNMT | |||
}} | }} |
Latest revision as of 03:55, 17 September 2015
Short description: | p3@HNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNMT_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000280096_5end |
EntrezGene: | HNMT |
HGNC: | 5028 |
UniProt: | Q9BRW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.69e-09 | 59 |
monocyte | 3.69e-09 | 59 |
monoblast | 3.69e-09 | 59 |
promonocyte | 3.69e-09 | 59 |
macrophage dendritic cell progenitor | 4.53e-09 | 61 |
granulocyte monocyte progenitor cell | 3.04e-07 | 67 |
defensive cell | 4.42e-07 | 48 |
phagocyte | 4.42e-07 | 48 |
myeloid lineage restricted progenitor cell | 5.17e-07 | 66 |
hepatocyte | 9.69e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 6.54e-11 | 223 |
adult organism | 5.80e-10 | 114 |
central nervous system | 3.60e-08 | 81 |
neural tube | 2.01e-07 | 56 |
neural rod | 2.01e-07 | 56 |
future spinal cord | 2.01e-07 | 56 |
neural keel | 2.01e-07 | 56 |
nervous system | 6.82e-07 | 89 |