FFCP PHASE1:Hg19::chr10:13749591..13749596,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:13749591..13749596,- to FFCP PHASE1:Hg19::chr10:13749591..13749596,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000477221_5end | |||
|cluster_id=chr10:13749591..13749596,- | |||
|description=CAGE_peak_8_at_FRMD4A_5end | |||
|id=chr10:13749591..13749596,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-09!180;CL:0000183!3.05e-08!59;CL:0000220!1.31e-07!246;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57;CL:0002321!2.46e-07!248;CL:0000187!3.28e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.93e-10;3!CL:0000148;7.10e-08;10!CL:0000723;7.82e-08;61!CL:0000569;2.07e-07;4!CL:0000048;3.55e-07;58!CL:0000047;4.79e-07;2!CL:0002583;4.79e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.76e-10,3;CL:0000333,5.60e-08,41;CL:0000133,5.68e-08,59;CL:0000148,9.11e-08,10;CL:0000541,9.11e-08,10;CL:0000187,1.03e-07,55;CL:0000569,1.87e-07,4;CL:0000011,1.87e-07,4;CL:0002583,2.60e-07,2;CL:0000680,3.67e-07,58;CL:0000056,3.67e-07,58;CL:0000355,3.67e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000011;2.07e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.44e-17;14!DOID:120;7.55e-08;27!DOID:193;3.42e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.36e-17,14;DOID:120,7.11e-08,27;DOID:193,3.23e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.05e-08!70;UBERON:0000475!7.49e-08!365;UBERON:0000486!3.01e-07!82;UBERON:0000914!3.12e-07!83;UBERON:0002329!3.12e-07!83;UBERON:0003077!3.12e-07!83;UBERON:0003059!3.12e-07!83;UBERON:0007282!3.12e-07!83;UBERON:0009618!3.12e-07!83;UBERON:0007285!3.12e-07!83;UBERON:0002100!5.64e-07!216;UBERON:0005256!5.89e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.20e-08;13!UBERON:0002119;1.02e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.59e-08,13;UBERON:0002119,7.47e-08,4;UBERON:0002329,2.75e-07,71;UBERON:0003059,2.75e-07,71;UBERON:0007282,2.75e-07,71;UBERON:0004290,2.75e-07,71;UBERON:0009618,2.75e-07,71;UBERON:0007503,2.91e-07,78;UBERON:0003077,3.87e-07,72;UBERON:0007285,3.87e-07,72;UBERON:0007524,5.41e-07,73 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0.631719873426831,0,1.72013755551056,0,0.436882744260345,0,0,0.331397375727916,3.36162573225888,1.80808358407193,0.730310090387373,0.487932798790507,0.369363174230364,1.63200552995402,0,0,0,0,2.21598876669059,1.47781061009902,1.25937250101887,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0,0,0.795285947051099,0,1.41802225746102,0.665188192387692,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0,1.0447784237956,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.44905874525234,0,0,0,0.366403487860815,0,0,0,0.993943903390637,0.506522046658319,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0.269421344139376,0.980771418680752,0.302714855289863,0,0.234321431833797,0.624320153660641,0,0.597794722207204,0.587172493218824,1.13311061057692,0.702254033511242,0,0,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0.567160915800105,0.717558542755448,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0,0,0,0.323292113637624,0,0.403008392910561,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0.686271241194102,0.329250856225877,0,0.301586917234893,0.833296006426766,0,2.07986957055916,0,1.04337364477569,0,0,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0.234004265139238,0.891786973732369,0,0,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0.253991577168676,1.14596527667483,1.17217447210047,3.4214489204541,1.23392991243988,3.00343057843917,0.571652865261156,0.336393253036082,0,0.51336800074665,0.517086863031111,0,2.535908257668,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,1.01637849688985,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.173767228936166,1.17480694477644,0,0,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,1.23367755042124,1.77561725313127,0.739144404124282,1.03850885836724,0.697262270759755,0.120859449591622,0,0.276242966807689,0.803701137152247,0.182091168006717,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0.921022048356777,1.10269257987624,0.107420244868274,0,1.02271952899321,0.0890320356467374,0,0,0.638063562472921,0,0.929691098594572,0,0,0.616067160352178,1.06461206063404,0,0.37064843820784,0.429374660225974,0,1.89827654831236,1.14378116354295,0,0,0,0.78494864019923,0,1.09814811894422,0.706874414074119,1.61745985258653,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0,2.26016233240486,1.10273068709225,0,0,0.578775534266688,0,0,0,1.40847801266121,0.717056761020258,0.0982490410131212,0.35667105148125,1.06428319221179,0,0,0,0.349934720244983,0.192444225451024,0.670302275535787,1.08890984861323,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0.511572370226872,0,0,0,1.93866549219044,0.0927680981618513,0,0.7812832832557,0.349839999984783,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0.269272933229316,1.62971057883012,0.638002319463839,0.732780747214898,2.13213910407454,0,0,0,0,0,0,0,0,0,0.489698424477443,0.848118428603645,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0,0.822251547880505,0,0.0633107959558787,0.195551382734803,0.64127056201227,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0,0,0.407712618220842,0.627617077873999,0,1.15580235960608,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0.858452096273142,0.223171457441873,0.201550417460179,0,0,0,0,0,0.196854963029498,0.423366660328922,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0.670869375198532,0.157611414598396,0.314727528809989,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0.146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| 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| ||
|short_description=p8@FRMD4A | |||
}} | }} |
Latest revision as of 06:35, 17 September 2015
Short description: | p8@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FRMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000477221_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.76e-10 | 3 |
migratory neural crest cell | 5.60e-08 | 41 |
neurectodermal cell | 5.68e-08 | 59 |
melanocyte | 9.11e-08 | 10 |
melanoblast | 9.11e-08 | 10 |
muscle cell | 1.03e-07 | 55 |
cardiac mesenchymal cell | 1.87e-07 | 4 |
migratory trunk neural crest cell | 1.87e-07 | 4 |
subcutaneous preadipocyte | 2.60e-07 | 2 |
muscle precursor cell | 3.67e-07 | 58 |
myoblast | 3.67e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.59e-08 | 13 |
left ovary | 7.47e-08 | 4 |
somite | 2.75e-07 | 71 |
presomitic mesoderm | 2.75e-07 | 71 |
presumptive segmental plate | 2.75e-07 | 71 |
dermomyotome | 2.75e-07 | 71 |
trunk paraxial mesoderm | 2.75e-07 | 71 |
epithelial vesicle | 2.91e-07 | 78 |
paraxial mesoderm | 3.87e-07 | 72 |
presumptive paraxial mesoderm | 3.87e-07 | 72 |
dense mesenchyme tissue | 5.41e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.36e-17 | 14 |
female reproductive organ cancer | 7.11e-08 | 27 |
reproductive organ cancer | 3.23e-07 | 29 |