FFCP PHASE1:Hg19::chr1:27240553..27240564,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8431 | |EntrezGene=8431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7961 | |HGNC=7961 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8P5,Q15466 | |UniProt=F1D8P5,Q15466 | ||
|association_with_transcript=2bp_to_NM_021969,uc001bnf.2_5end | |association_with_transcript=2bp_to_NM_021969,uc001bnf.2_5end | ||
|cluster_id=chr1:27240553..27240564,- | |||
|description=CAGE_peak_3_at_NR0B2_5end | |description=CAGE_peak_3_at_NR0B2_5end | ||
|id=chr1:27240553..27240564,- | |id=chr1:27240553..27240564,- | ||
|ontology_enrichment_celltype=CL:0000167!2.46e-12!1;CL:0000164!2.46e-12!1;CL:0000502!2.46e-12!1;CL:0000172!2.46e-12!1;CL:0000173!2.46e-12!1;CL:0002351!2.46e-12!1;CL:0000181!6.88e-09!12;CL:0000417!6.88e-09!12;CL:0000668!6.88e-09!12;CL:0000414!6.88e-09!12;CL:0000412!6.88e-09!12;CL:0000182!6.88e-09!12;CL:0002535!5.41e-07!2;CL:0000242!9.54e-07!2 | |ontology_enrichment_celltype=CL:0000167!2.46e-12!1;CL:0000164!2.46e-12!1;CL:0000502!2.46e-12!1;CL:0000172!2.46e-12!1;CL:0000173!2.46e-12!1;CL:0002351!2.46e-12!1;CL:0000181!6.88e-09!12;CL:0000417!6.88e-09!12;CL:0000668!6.88e-09!12;CL:0000414!6.88e-09!12;CL:0000412!6.88e-09!12;CL:0000182!6.88e-09!12;CL:0002535!5.41e-07!2;CL:0000242!9.54e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;8.34e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.07e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!2.46e-12!1;DOID:305!2.01e-07!106;DOID:3493!4.56e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;8.34e-18;2!DOID:5409;1.38e-09;4!DOID:4362;6.33e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.48e-18,2;DOID:5409,1.57e-09,4;DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0009497!2.70e-07!25;UBERON:0000015!2.70e-07!25;UBERON:0002423!2.70e-07!25;UBERON:0006235!2.70e-07!25;UBERON:0004161!2.70e-07!25;UBERON:0006955!5.41e-07!2;UBERON:0004801!5.41e-07!2 | |ontology_enrichment_uberon=UBERON:0009497!2.70e-07!25;UBERON:0000015!2.70e-07!25;UBERON:0002423!2.70e-07!25;UBERON:0006235!2.70e-07!25;UBERON:0004161!2.70e-07!25;UBERON:0006955!5.41e-07!2;UBERON:0004801!5.41e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.72e-27;4!UBERON:0006955;8.34e-18;2!UBERON:0004801;8.34e-18;2!UBERON:0002114;2.45e-12;2!UBERON:0000160;2.42e-08;17!UBERON:0000002;8.25e-07;6!UBERON:0001560;8.25e-07;6!UBERON:0005409;9.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.11e-27,4;UBERON:0006955,9.07e-18,2;UBERON:0004801,9.07e-18,2;UBERON:0002114,3.24e-12,2;UBERON:0000160,2.51e-08,17;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.329663433524666,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82876887473404,0,0.102662806856247,0,0,0,0,0,0,0,1.35866559210006,1.62065732026684,0,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.329663433524666,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82876887473404,0,0.102662806856247,0,0,0,0,0,0,0,1.35866559210006,1.62065732026684,0,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@NR0B2 | |short_description=p3@NR0B2 | ||
}} | }} |
Latest revision as of 06:55, 17 September 2015
Short description: | p3@NR0B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR0B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_NM_021969, uc001bnf.2_5end |
EntrezGene: | NR0B2 |
HGNC: | 7961 |
UniProt: | F1D8P5Q15466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.11e-27 | 4 |
uterine epithelium | 9.07e-18 | 2 |
cervix epithelium | 9.07e-18 | 2 |
duodenum | 3.24e-12 | 2 |
intestine | 2.51e-08 | 17 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
lung small cell carcinoma | 1.57e-09 | 4 |
cervical cancer | 6.55e-08 | 5 |