FFCP PHASE1:Hg19::chr13:38156622..38156656,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=B7Z4V4 | |||
|association_with_transcript=-13bp_to_AK297914_5end | |||
|cluster_id=chr13:38156622..38156656,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_2_at_AK297914_5end | |||
|id=chr13:38156622..38156656,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-19!180;CL:0000057!5.28e-15!75;CL:0002334!1.15e-11!12;CL:0000680!1.20e-10!57;CL:0000056!1.20e-10!57;CL:0000355!1.20e-10!57;CL:0002494!4.23e-10!16;CL:0000187!1.01e-09!54;CL:0000393!1.30e-08!60;CL:0000211!1.30e-08!60;CL:0000183!3.21e-08!59;CL:0002548!1.54e-07!6;CL:0000188!7.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.61e-14;12!CL:0002548;2.86e-11;6!CL:0002580;1.33e-09;3!CL:0002494;1.35e-09;16!CL:0000135;1.65e-09;3!CL:0000388;1.65e-09;3!CL:0002579;4.51e-09;3!CL:0000746;9.97e-09;3!CL:1000306;5.71e-07;4!CL:0002547;5.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.39e-16,76;CL:0002334,9.83e-14,12;CL:0002548,5.46e-11,6;CL:0002580,1.26e-09,3;CL:0000135,1.68e-09,3;CL:0000388,1.68e-09,3;CL:0002494,1.82e-09,16;CL:0002579,6.22e-09,3;CL:0000746,8.63e-09,3;CL:0000513,8.63e-09,3;CL:1000306,5.67e-07,4;CL:0002547,5.67e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;9.97e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.84e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.77e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.09e-11!61;UBERON:0002036!2.09e-11!61;UBERON:0003082!2.09e-11!61;UBERON:0002385!9.73e-11!63;UBERON:0001015!9.73e-11!63;UBERON:0000383!9.73e-11!63;UBERON:0000948!3.83e-10!24;UBERON:0005498!3.83e-10!24;UBERON:0004140!3.83e-10!24;UBERON:0009881!3.83e-10!24;UBERON:0004141!3.83e-10!24;UBERON:0003084!3.83e-10!24;UBERON:0007005!3.83e-10!24;UBERON:0004139!3.83e-10!24;UBERON:0004291!3.83e-10!24;UBERON:0007100!1.62e-09!27;UBERON:0004290!9.76e-09!70;UBERON:0000914!1.99e-08!83;UBERON:0002329!1.99e-08!83;UBERON:0003077!1.99e-08!83;UBERON:0003059!1.99e-08!83;UBERON:0007282!1.99e-08!83;UBERON:0009618!1.99e-08!83;UBERON:0007285!1.99e-08!83;UBERON:0004872!7.54e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.65e-09;3!UBERON:0000043;1.65e-09;3!UBERON:0007845;1.65e-09;3!UBERON:0004797;5.71e-07;4!UBERON:0000415;5.71e-07;4!UBERON:0007240;5.71e-07;4!UBERON:0005742;5.71e-07;4!UBERON:0005734;5.71e-07;4!UBERON:0004664;5.71e-07;4!UBERON:0004663;5.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.68e-09,3;UBERON:0000043,1.68e-09,3;UBERON:0007845,1.68e-09,3;UBERON:0000948,1.69e-07,24;UBERON:0005498,1.69e-07,24;UBERON:0004140,1.69e-07,24;UBERON:0009881,1.69e-07,24;UBERON:0004141,1.69e-07,24;UBERON:0003084,1.69e-07,24;UBERON:0007005,1.69e-07,24;UBERON:0004139,1.69e-07,24;UBERON:0004291,1.69e-07,24;UBERON:0000415,5.67e-07,4;UBERON:0007240,5.67e-07,4;UBERON:0005742,5.67e-07,4;UBERON:0005734,5.67e-07,4;UBERON:0004664,5.67e-07,4;UBERON:0004663,5.67e-07,4 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.986680828671798,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,1.46379839637152,0,0,0,0.85870796139317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,1.40648818027883,0,1.50401373190767,0.579386075843295,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,3.24056779152704,0,0,0,0,0,0,0,0,0,10.4364109856017,1.39293562831038,3.04541115870403,5.44989579422746,0.709336764396714,1.12135520028461,1.06748995729705,2.22000793575444,0.311211035399766,2.55950276932407,3.59616186849609,0,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0.150238058906597,3.17610112848059,0.538168907066586,1.92201649936711,1.48352330811693,1.20036438433761,0.206105058476878,0.772921620136887,0.930584281657949,0,0.0974370051611986,0,0.828449087780694,0,1.06502877754984,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,7.53598442648965,6.10073421020206,11.0970020212083,0,0,0,2.63587341040741,2.29723871668228,0,1.30303176000821,0,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,8.11086359970148,6.42344359669782,1.57702415033935,0.585707074963566,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,6.4508030032882,2.60885354589706,4.49056151092918,2.94720043288112,1.02341449813341,5.79074116116987,0,0.771048469013278,2.48586415438378,0.821271560138091,0.519254429183621,1.16210378459959,0,0,0,0.34444334449382,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.773365746336976,0.462145851343933,1.22802939780904,0.551346289938122,0.429680979473094,0.435050081742686,0.170453254832202,2.67096106940212,0.165284915360978,0.192190067365106,0,0,0,1.88887408098384,0,0,0,0,0.37064843820784,2.00374841438788,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.706874414074119,0.808729926293264,0,0.421258456238981,0,0,0,0.409499734223957,5.09059555033366,0,0,1.32687795048244,0.876901770507525,0,0.655894752046633,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,3.42143546427988,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,1.10961172300523,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0.899606224327209,1.24210365501008,1.24411862352257,3.98762571836992,1.5652351854352,1.20206087197775,8.3777146677135,0,0,1.28892668450986,0,1.19428766609585,0,5.15093557774189,3.03074539889327,0,0,0.214441591374926,0,4.98753036126999,0,0.97894681802587,0.71635536432595,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45206090914786,0,0,2.46873160583479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47394725759087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,5.81207126840626,0,0.801711364730253,0.62164849248911,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41810498188324,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,10.0438654905023,1.38652688589425,6.05677186973305,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0,1.90451545170992,0,0,0,0,0.404234377916439,0,0,0,0.0717222053926763,1.66330178273007,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p2@AK297914 | |||
}} |
Latest revision as of 06:59, 17 September 2015
Short description: | p2@AK297914 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK297914_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | -13bp_to_AK297914_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.39e-16 | 76 |
preadipocyte | 9.83e-14 | 12 |
cardiac fibroblast | 5.46e-11 | 6 |
preadipocyte of the breast | 1.26e-09 | 3 |
fibrocyte | 1.68e-09 | 3 |
tendon cell | 1.68e-09 | 3 |
cardiocyte | 1.82e-09 | 16 |
omentum preadipocyte | 6.22e-09 | 3 |
cardiac muscle cell | 8.63e-09 | 3 |
cardiac muscle myoblast | 8.63e-09 | 3 |
fibroblast of tunica adventitia of artery | 5.67e-07 | 4 |
fibroblast of the aortic adventitia | 5.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.68e-09 | 3 |
tendon | 1.68e-09 | 3 |
regular connective tissue | 1.68e-09 | 3 |
heart | 1.69e-07 | 24 |
primitive heart tube | 1.69e-07 | 24 |
primary heart field | 1.69e-07 | 24 |
anterior lateral plate mesoderm | 1.69e-07 | 24 |
heart tube | 1.69e-07 | 24 |
heart primordium | 1.69e-07 | 24 |
cardiac mesoderm | 1.69e-07 | 24 |
cardiogenic plate | 1.69e-07 | 24 |
heart rudiment | 1.69e-07 | 24 |
artery wall | 5.67e-07 | 4 |
tunica adventitia of artery | 5.67e-07 | 4 |
adventitia | 5.67e-07 | 4 |
tunica adventitia of blood vessel | 5.67e-07 | 4 |
aorta tunica adventitia | 5.67e-07 | 4 |
aorta wall | 5.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.77e-11 | 14 |